RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 CEP170Q5SW79 1584 aa14.1□□□□□ -0.15
COL4A1-201ENST00000375820 A0A1W2PQJ5 194 aa14.1□□□□□ -0.15
COL4A1-201ENST00000375820 PEX1O43933 1283 aa14.1□□□□□ -0.15
COL4A1-201ENST00000375820 ZNF189O75820 626 aaPredicted RBP14.1□□□□□ -0.15
COL4A1-201ENST00000375820 STIP1P31948 543 aaKnown RBP14.1□□□□□ -0.15
COL4A1-201ENST00000375820 MACC1Q6ZN28 852 aa14.1□□□□□ -0.15
COL4A1-201ENST00000375820 EFL1Q7Z2Z2 1120 aaKnown RBP14.1□□□□□ -0.15
COL4A1-201ENST00000375820 MRPS31Q92665 395 aaKnown RBP14.1□□□□□ -0.15
COL4A1-201ENST00000375820 OSMRQ99650 979 aa14.1□□□□□ -0.15
COL4A1-201ENST00000375820 TMEM79Q9BSE2 394 aa14.1□□□□□ -0.15
COL4A1-201ENST00000375820 STN1Q9H668 368 aaKnown RBP14.1□□□□□ -0.15
COL4A1-201ENST00000375820 O00370 1275 aa14.1□□□□□ -0.15
COL4A1-201ENST00000375820 GLP2RO95838 553 aa14.1□□□□□ -0.15
COL4A1-201ENST00000375820 MYL6P60660 151 aa14.1□□□□□ -0.15
COL4A1-201ENST00000375820 NCF4Q15080 339 aa14.1□□□□□ -0.15
COL4A1-201ENST00000375820 RASA2Q15283 850 aa14.1□□□□□ -0.15
COL4A1-201ENST00000375820 FAM228AQ86W67 206 aa14.1□□□□□ -0.15
COL4A1-201ENST00000375820 ZNF677Q86XU0 584 aa14.1□□□□□ -0.15
COL4A1-201ENST00000375820 WDR36Q8NI36 951 aaKnown RBP14.1□□□□□ -0.15
COL4A1-201ENST00000375820 SPPL2AQ8TCT8 520 aa14.1□□□□□ -0.15
COL4A1-201ENST00000375820 ATP8B4Q8TF62 1192 aa14.1□□□□□ -0.15
COL4A1-201ENST00000375820 PPP1R2P1Q96PQ5 205 aa14.1□□□□□ -0.15
COL4A1-201ENST00000375820 SNTG2Q9NY99 539 aa14.1□□□□□ -0.15
COL4A1-201ENST00000375820 TUBE1Q9UJT0 475 aa14.1□□□□□ -0.15
COL4A1-201ENST00000375820 MAP3K4Q9Y6R4 1608 aa14.1□□□□□ -0.15
COL4A1-201ENST00000375820 ARHGEF40Q8TER5 1519 aa14.1□□□□□ -0.15
COL4A1-201ENST00000375820 RFX7Q2KHR2 1363 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 PSTPIP1O43586 416 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 SYNCRIPO60506 623 aaKnown RBP14.09□□□□□ -0.15
COL4A1-201ENST00000375820 TRIM13O60858 407 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 ZSWIM7Q19AV6 140 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 SAPCD2Q86UD0 394 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 PDLIM2Q96JY6 352 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 IGFLR1Q9H665 355 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 EFCAB1Q9HAE3 211 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 CPA4Q9UI42 421 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 CXCL8P10145 99 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 THRAP10827 490 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 RRM1P23921 792 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 TAF5Q15542 800 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 PRR23CQ6ZRP0 262 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 ZNF438Q7Z4V0 828 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 LRRC6Q86X45 466 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.09□□□□□ -0.15
COL4A1-201ENST00000375820 C19orf18Q8NEA5 215 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 FAM151AQ8WW52 585 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 DPF3Q92784 378 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 IL25Q9H293 177 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 ALDH8A1Q9H2A2 487 aaPredicted RBP14.09□□□□□ -0.15
COL4A1-201ENST00000375820 CDC42EP4Q9H3Q1 356 aaKnown RBP14.09□□□□□ -0.15
COL4A1-201ENST00000375820 ELOVL6Q9H5J4 265 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 C10orf88Q9H8K7 445 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 WDR27A2RRH5 827 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 RRN3P2A6NIE6 340 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 NUP62P37198 522 aaPredicted RBP14.09□□□□□ -0.15
COL4A1-201ENST00000375820 FCGRTP55899 365 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 BFSP2Q13515 415 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 IZUMO2Q6UXV1 221 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 MTSS1LQ765P7 747 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 RIBC1Q8N443 379 aaPredicted RBP14.09□□□□□ -0.15
COL4A1-201ENST00000375820 PRCCQ92733 491 aaPredicted RBP14.09□□□□□ -0.15
COL4A1-201ENST00000375820 OPTNQ96CV9 577 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 SLC25A27O95847 323 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 FGFR3P22607 806 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 SP100P23497 879 aaPredicted RBP14.09□□□□□ -0.15
COL4A1-201ENST00000375820 GRK3P35626 688 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 PNPLA4P41247 253 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 FXR2P51116 673 aaKnown RBP eCLIP14.09□□□□□ -0.15
COL4A1-201ENST00000375820 LY6KQ17RY6 165 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 SBK1Q52WX2 424 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 SLC44A4Q53GD3 710 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 RHBGQ9H310 441 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 ACTR8Q9H981 624 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 PDGFCQ9NRA1 345 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 TKTL1P51854 596 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 CYP4Z1Q86W10 505 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 FAM120BQ96EK7 910 aaKnown RBP14.09□□□□□ -0.15
COL4A1-201ENST00000375820 MAGEB18Q96M61 343 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 MTA3Q9BTC8 594 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 REXO4Q9GZR2 422 aaKnown RBP14.09□□□□□ -0.15
COL4A1-201ENST00000375820 SEMA6AQ9H2E6 1030 aa14.09□□□□□ -0.15
COL4A1-201ENST00000375820 GTF2E2P29084 291 aaKnown RBP14.08□□□□□ -0.15
COL4A1-201ENST00000375820 NPTX2P47972 431 aa14.08□□□□□ -0.15
COL4A1-201ENST00000375820 PSMC6P62333 389 aa14.08□□□□□ -0.15
COL4A1-201ENST00000375820 TBCELQ5QJ74 424 aa14.08□□□□□ -0.15
COL4A1-201ENST00000375820 CAMKK1Q8N5S9 505 aa14.08□□□□□ -0.15
COL4A1-201ENST00000375820 SIKE1Q9BRV8 207 aa14.08□□□□□ -0.15
COL4A1-201ENST00000375820 LAMC1P11047 1609 aa14.08□□□□□ -0.15
COL4A1-201ENST00000375820 ENO2P09104 434 aaPredicted RBP14.08□□□□□ -0.16
COL4A1-201ENST00000375820 CYP11B2P19099 503 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 POM121L1PQ3SYA9 428 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 BOLA3Q53S33 107 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 DEFB107AQ8IZN7 70 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 TMEM237Q96Q45 408 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 A0A087WZ62 844 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 MAGEA13PA6NCF6 341 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 MTSS1O43312 755 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 ZNF862O60290 1169 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 RNASEH1O60930 286 aaKnown RBP14.08□□□□□ -0.16
COL4A1-201ENST00000375820 CYP2F1P24903 491 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms