RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 MEI4A8MW99 385 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 RGL2O15211 777 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 CLASP2O75122 1294 aaKnown RBP11.88□□□□□ -0.51
PTCH1-203ENST00000375274 SOAT2O75908 522 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 LCA5LO95447 670 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 CALCAP01258 141 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 RGS4P49798 205 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 GTF2BQ00403 316 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 LAMTOR4Q0VGL1 99 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 PRKAA1Q13131 559 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 MAMLD1Q13495 774 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 ECM1Q16610 540 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 ACCSLQ4AC99 568 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 AGKQ53H12 422 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 MFN1Q8IWA4 741 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 GDPD5Q8WTR4 605 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 LRRC39Q96DD0 335 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 PWWP2AQ96N64 755 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 HSD17B14Q9BPX1 270 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 APPL1Q9UKG1 709 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 VANGL2Q9ULK5 521 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 DRG1Q9Y295 367 aaKnown RBP11.88□□□□□ -0.51
PTCH1-203ENST00000375274 RRN3P2A6NIE6 340 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 TNPO2O14787 897 aaKnown RBP11.88□□□□□ -0.51
PTCH1-203ENST00000375274 ZSCAN9O15535 394 aaPredicted RBP11.88□□□□□ -0.51
PTCH1-203ENST00000375274 CSDE1O75534 798 aaKnown RBP11.88□□□□□ -0.51
PTCH1-203ENST00000375274 ADRB2P07550 413 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 SPATA31C1P0DKV0 1188 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 S100A5P33763 92 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 PTDSS1P48651 473 aaKnown RBP11.88□□□□□ -0.51
PTCH1-203ENST00000375274 POU4F1Q01851 419 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 DDR1Q08345 913 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 DGKDQ16760 1214 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 LRRC38Q5VT99 294 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 P3H2Q8IVL5 708 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 RASGEF1CQ8N431 466 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 RNF148Q8N7C7 305 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 ZNF398Q8TD17 642 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 FAM162AQ96A26 154 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 RBBP8Q99708 897 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 CEP41Q9BYV8 373 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 SCN3BQ9NY72 215 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 LIASO43766 372 aa11.87□□□□□ -0.51
PTCH1-203ENST00000375274 USP1O94782 785 aa11.87□□□□□ -0.51
PTCH1-203ENST00000375274 FAM58BPP0C7Q3 252 aa11.87□□□□□ -0.51
PTCH1-203ENST00000375274 ETFBP38117 255 aa11.87□□□□□ -0.51
PTCH1-203ENST00000375274 NDST1P52848 882 aa11.87□□□□□ -0.51
PTCH1-203ENST00000375274 ACAP1Q15027 740 aa11.87□□□□□ -0.51
PTCH1-203ENST00000375274 ARSHQ5FYA8 562 aa11.87□□□□□ -0.51
PTCH1-203ENST00000375274 PTRHD1Q6GMV3 140 aaKnown RBP11.87□□□□□ -0.51
PTCH1-203ENST00000375274 THUMPD3Q9BV44 507 aaKnown RBP11.87□□□□□ -0.51
PTCH1-203ENST00000375274 GPBP1L1Q9HC44 474 aaPredicted RBP11.87□□□□□ -0.51
PTCH1-203ENST00000375274 SEPT3Q9UH03 358 aa11.87□□□□□ -0.51
PTCH1-203ENST00000375274 A0A096LPK6 155 aa11.87□□□□□ -0.51
PTCH1-203ENST00000375274 KANSL1LA0AUZ9 987 aa11.87□□□□□ -0.51
PTCH1-203ENST00000375274 TRDMT1O14717 391 aaKnown RBP11.87□□□□□ -0.51
PTCH1-203ENST00000375274 HNRNPRO43390 633 aaKnown RBP11.87□□□□□ -0.51
PTCH1-203ENST00000375274 MT-CO1P00395 513 aa11.87□□□□□ -0.51
PTCH1-203ENST00000375274 KDELR1P24390 212 aa11.87□□□□□ -0.51
PTCH1-203ENST00000375274 RBL1P28749 1068 aa11.87□□□□□ -0.51
PTCH1-203ENST00000375274 XRCC4Q13426 336 aa11.87□□□□□ -0.51
PTCH1-203ENST00000375274 CCDC153Q494R4 210 aa11.87□□□□□ -0.51
PTCH1-203ENST00000375274 ZNF484Q5JVG2 852 aa11.87□□□□□ -0.51
PTCH1-203ENST00000375274 THEMIS2Q5TEJ8 643 aa11.87□□□□□ -0.51
PTCH1-203ENST00000375274 CHSY1Q86X52 802 aa11.87□□□□□ -0.51
PTCH1-203ENST00000375274 HTR3CQ8WXA8 447 aa11.87□□□□□ -0.51
PTCH1-203ENST00000375274 SIKE1Q9BRV8 207 aa11.87□□□□□ -0.51
PTCH1-203ENST00000375274 PIH1D1Q9NWS0 290 aaKnown RBP11.87□□□□□ -0.51
PTCH1-203ENST00000375274 UBP1Q9NZI7 540 aa11.87□□□□□ -0.51
PTCH1-203ENST00000375274 HACL1Q9UJ83 578 aa11.87□□□□□ -0.51
PTCH1-203ENST00000375274 ATP5BP06576 529 aaKnown RBP11.87□□□□□ -0.51
PTCH1-203ENST00000375274 RBP1P09455 135 aa11.87□□□□□ -0.51
PTCH1-203ENST00000375274 NNMTP40261 264 aa11.87□□□□□ -0.51
PTCH1-203ENST00000375274 SLC26A2P50443 739 aa11.87□□□□□ -0.51
PTCH1-203ENST00000375274 NCALDP61601 193 aa11.87□□□□□ -0.51
PTCH1-203ENST00000375274 TWF1Q12792 350 aa11.87□□□□□ -0.51
PTCH1-203ENST00000375274 HYIQ5T013 277 aa11.87□□□□□ -0.51
PTCH1-203ENST00000375274 KCNT2Q6UVM3 1135 aa11.87□□□□□ -0.51
PTCH1-203ENST00000375274 KYAT3Q6YP21 454 aaKnown RBP11.87□□□□□ -0.51
PTCH1-203ENST00000375274 PIWIL2Q8TC59 973 aaKnown RBP11.87□□□□□ -0.51
PTCH1-203ENST00000375274 C17orf80Q9BSJ5 609 aa11.87□□□□□ -0.51
PTCH1-203ENST00000375274 ERVK-5Q9HDB9 667 aa11.87□□□□□ -0.51
PTCH1-203ENST00000375274 A0A087WZ62 844 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 UBDO15205 165 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 NOL4O94818 638 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 DDHD2O94830 711 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 C6orf222P0C671 652 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-203ENST00000375274 RAG1P15918 1043 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 CSHL1Q14406 222 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 FUT11Q495W5 492 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 METTL7BQ6UX53 244 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 LRP10Q7Z4F1 713 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 BLOC1S5Q8TDH9 187 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 ZNF333Q96JL9 665 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 SLITRK1Q96PX8 696 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 FDXACB1Q9BRP7 624 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-203ENST00000375274 FGFBP2Q9BYJ0 223 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 GPAMQ9HCL2 828 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 FAM32AQ9Y421 112 aaKnown RBP11.86□□□□□ -0.51
PTCH1-203ENST00000375274 ATXN2Q99700 1313 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms