RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 TRIM65Q6PJ69 517 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 ZNF598Q86UK7 904 aaKnown RBP9.38□□□□□ -0.91
UBR4-201ENST00000375218 SULF1Q8IWU6 871 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 CCNYL1Q8N7R7 359 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 HDAC11Q96DB2 347 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 BTBD6Q96KE9 485 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 ZNF518BQ9C0D4 1074 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 REXO4Q9GZR2 422 aaKnown RBP9.38□□□□□ -0.91
UBR4-201ENST00000375218 NEK6Q9HC98 313 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 NDOR1Q9UHB4 597 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 RCOR1Q9UKL0 485 aa9.38□□□□□ -0.91
UBR4-201ENST00000375218 WDFY3Q8IZQ1 3526 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 RHPN2P1A8MT19 583 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 CREMQ03060 361 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 AAK1Q2M2I8 961 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 SGO2Q562F6 1265 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 TRIM2Q9C040 744 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 CCDC86Q9H6F5 360 aaKnown RBP9.37□□□□□ -0.91
UBR4-201ENST00000375218 COPS7BQ9H9Q2 264 aaPredicted RBP9.37□□□□□ -0.91
UBR4-201ENST00000375218 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.37□□□□□ -0.91
UBR4-201ENST00000375218 HACD3Q9P035 362 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 KLHL9Q9P2J3 617 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 HESX1Q9UBX0 185 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 PCDHGA3Q9Y5H0 932 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 MYPNQ86TC9 1320 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 E9PMD0 336 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 SUPT3HO75486 399 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 CYP1A1P04798 512 aaPredicted RBP9.37□□□□□ -0.91
UBR4-201ENST00000375218 ITGB1P05556 798 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 CFL1P23528 166 aaKnown RBP9.37□□□□□ -0.91
UBR4-201ENST00000375218 BMI1P35226 326 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 KCNJ5P48544 419 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 CAP1Q01518 475 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 MC1RQ01726 317 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 B3GNT9Q6UX72 402 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 CPOQ8IVL8 374 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.37□□□□□ -0.91
UBR4-201ENST00000375218 FAM13CQ8NE31 585 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 PIGOQ8TEQ8 1089 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 THRSPQ92748 146 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 CELF1Q92879 486 aaKnown RBP9.37□□□□□ -0.91
UBR4-201ENST00000375218 FAM204AQ9H8W3 233 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 PKD2L2Q9NZM6 624 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 COMMD3-BMI1R4GMX3 469 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 PMS2P1A4D2B8 440 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 GMFGO60234 142 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 TOM1O60784 492 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 LRPAP1P30533 357 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 IL2P60568 153 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 GMFBP60983 142 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 KCNC3Q14003 757 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 HERC3Q15034 1050 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 ADIPOQQ15848 244 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 FAM26FQ5R3K3 315 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 CYP4A22Q5TCH4 519 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 C16orf46Q6P387 395 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 FOXR2Q6PJQ5 311 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 LBX2Q6XYB7 198 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 OVCH2Q7RTZ1 564 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 SGMS1Q86VZ5 419 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 CHERPQ8IWX8 916 aaKnown RBP9.37□□□□□ -0.91
UBR4-201ENST00000375218 SEPT12Q8IYM1 358 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 MFSD2AQ8NA29 543 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 ST7LQ8TDW4 575 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 ATP2A3Q93084 1043 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 AIDAQ96BJ3 306 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 CITED4Q96RK1 184 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 IFT22Q9H7X7 185 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 INVSQ9Y283 1065 aa9.37□□□□□ -0.91
UBR4-201ENST00000375218 L7N2F9 121 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 TAF5LO75529 589 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 DNAJC8O75937 253 aaPredicted RBP9.36□□□□□ -0.91
UBR4-201ENST00000375218 GALP22466 123 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 RASIP1Q5U651 963 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 SPECC1LQ69YQ0 1117 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 EDEM1Q92611 657 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 P2RX7Q99572 595 aaKnown RBP9.36□□□□□ -0.91
UBR4-201ENST00000375218 CNPPD1Q9BV87 410 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 SPATA9Q9BWV2 254 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 WASH6PQ9NQA3 447 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 DMRT3Q9NQL9 472 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 MYH6P13533 1939 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 RTL9Q8NET4 1388 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 A4D1N5 150 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 NPTXRO95502 500 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 NT5C2P49902 561 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 TUBA4AP68366 448 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 PMS2P11Q13670 270 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 AOC3Q16853 763 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 SPATS1Q496A3 300 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 RHOUQ7L0Q8 258 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 KRT25Q7Z3Z0 450 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 COMTD1Q86VU5 262 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 DNAAF3Q8N9W5 541 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 MAP4K1Q92918 833 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 PANX2Q96RD6 677 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 C9orf16Q9BUW7 83 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 THUMPD3Q9BV44 507 aaKnown RBP9.36□□□□□ -0.91
UBR4-201ENST00000375218 STK33Q9BYT3 514 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 PIH1D3Q9NQM4 214 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms