RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 TRPM3Q9HCF6 1732 aaPredicted RBP6.49□□□□□ -1.37
PTPN3-202ENST00000374541 PARP4Q9UKK3 1724 aaKnown RBP6.49□□□□□ -1.37
PTPN3-202ENST00000374541 PDXKO00764 312 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 CFHP08603 1231 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 SNRPAP09012 282 aaKnown RBP6.49□□□□□ -1.37
PTPN3-202ENST00000374541 TM4SF4P48230 202 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 HIRAP54198 1017 aaPredicted RBP6.49□□□□□ -1.37
PTPN3-202ENST00000374541 COASYQ13057 564 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 PDAP1Q13442 181 aaKnown RBP6.49□□□□□ -1.37
PTPN3-202ENST00000374541 PTK6Q13882 451 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 PSMD5Q16401 504 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 SYTL3Q4VX76 610 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 ZNF394Q53GI3 561 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 C2orf27AQ580R0 203 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 THEMIS2Q5TEJ8 643 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 SFR1Q86XK3 245 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 HERVK_113Q902F9 699 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 CCDC126Q96EE4 140 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 ARHGEF38Q9NXL2 777 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 UBAP1Q9NZ09 502 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 PAK5Q9P286 719 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 PHRF1Q9P1Y6 1649 aaKnown RBP6.49□□□□□ -1.37
PTPN3-202ENST00000374541 CFAP99D6REC4 459 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 FKBP9O95302 570 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 IFNA14P01570 189 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 CA3P07451 260 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 TALDO1P37837 337 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 PNPLA4P41247 253 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 SNRPFP62306 86 aaKnown RBP6.49□□□□□ -1.37
PTPN3-202ENST00000374541 ZNF200P98182 395 aaPredicted RBP6.49□□□□□ -1.37
PTPN3-202ENST00000374541 GFPT1Q06210 699 aaPredicted RBP6.49□□□□□ -1.37
PTPN3-202ENST00000374541 NME3Q13232 169 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 C6orf10Q5SRN2 563 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 FKBP9P1Q75LS8 142 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 CARNMT1Q8N4J0 409 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 HPS3Q969F9 1004 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 ERP27Q96DN0 273 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 SEC16BQ96JE7 1060 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 CELF4Q9BZC1 486 aaKnown RBP6.49□□□□□ -1.37
PTPN3-202ENST00000374541 SMPD4Q9NXE4 827 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 FBXO2Q9UK22 296 aaPredicted RBP6.49□□□□□ -1.37
PTPN3-202ENST00000374541 UBQLN1Q9UMX0 589 aaKnown RBP6.49□□□□□ -1.37
PTPN3-202ENST00000374541 PCDHB5Q9Y5E4 795 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 MYO1GB0I1T2 1018 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.49□□□□□ -1.37
PTPN3-202ENST00000374541 IGF2BP3O00425 579 aaKnown RBP eCLIP6.49□□□□□ -1.37
PTPN3-202ENST00000374541 TBC1D12O60347 775 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 RHOBTB1O94844 696 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 FTLP02792 175 aaPredicted RBP6.49□□□□□ -1.37
PTPN3-202ENST00000374541 DNTTP04053 509 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 RXRGP48443 463 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 COPAP53621 1224 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 VCPP55072 806 aaKnown RBP6.49□□□□□ -1.37
PTPN3-202ENST00000374541 GRM4Q14833 912 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 DRAP1Q14919 205 aaPredicted RBP6.49□□□□□ -1.37
PTPN3-202ENST00000374541 NFE2Q16621 373 aaPredicted RBP6.49□□□□□ -1.37
PTPN3-202ENST00000374541 PFKFB3Q16875 520 aaPredicted RBP6.49□□□□□ -1.37
PTPN3-202ENST00000374541 ARMC3Q5W041 872 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 TRMT11Q7Z4G4 463 aaKnown RBP6.49□□□□□ -1.37
PTPN3-202ENST00000374541 GPD1LQ8N335 351 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 REPS2Q8NFH8 660 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 FAM45AQ8TCE6 357 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 BTN2A2Q8WVV5 523 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 COPS5Q92905 334 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 ARL8AQ96BM9 186 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 CPB2Q96IY4 423 aa6.49□□□□□ -1.37
PTPN3-202ENST00000374541 PRMT1Q99873 361 aaKnown RBP6.49□□□□□ -1.37
PTPN3-202ENST00000374541 ALG13Q9NP73 1137 aaKnown RBP6.49□□□□□ -1.37
PTPN3-202ENST00000374541 LIMA1Q9UHB6 759 aaKnown RBP6.49□□□□□ -1.37
PTPN3-202ENST00000374541 UBA6A0AVT1 1052 aaPredicted RBP6.48□□□□□ -1.37
PTPN3-202ENST00000374541 CENPXA8MT69 81 aa6.48□□□□□ -1.37
PTPN3-202ENST00000374541 RNF103O00237 685 aa6.48□□□□□ -1.37
PTPN3-202ENST00000374541 PER2O15055 1255 aa6.48□□□□□ -1.37
PTPN3-202ENST00000374541 STX7O15400 261 aaKnown RBP6.48□□□□□ -1.37
PTPN3-202ENST00000374541 MTRF1O75570 445 aaKnown RBP6.48□□□□□ -1.37
PTPN3-202ENST00000374541 ATP5BP06576 529 aaKnown RBP6.48□□□□□ -1.37
PTPN3-202ENST00000374541 ITGA1P56199 1179 aa6.48□□□□□ -1.37
PTPN3-202ENST00000374541 NCF4Q15080 339 aa6.48□□□□□ -1.37
PTPN3-202ENST00000374541 TTC39BQ5VTQ0 682 aaPredicted RBP6.48□□□□□ -1.37
PTPN3-202ENST00000374541 INPP5DQ92835 1189 aa6.48□□□□□ -1.37
PTPN3-202ENST00000374541 LRRC39Q96DD0 335 aa6.48□□□□□ -1.37
PTPN3-202ENST00000374541 SH2D3AQ9BRG2 576 aa6.48□□□□□ -1.37
PTPN3-202ENST00000374541 SLC13A1Q9BZW2 595 aa6.48□□□□□ -1.37
PTPN3-202ENST00000374541 PLEKHA5Q9HAU0 1116 aa6.48□□□□□ -1.37
PTPN3-202ENST00000374541 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.48□□□□□ -1.37
PTPN3-202ENST00000374541 UBA2Q9UBT2 640 aaPredicted RBP6.48□□□□□ -1.37
PTPN3-202ENST00000374541 ZC3H7BQ9UGR2 993 aaKnown RBP6.48□□□□□ -1.37
PTPN3-202ENST00000374541 PDZK1P1A8MUH7 402 aa6.48□□□□□ -1.37
PTPN3-202ENST00000374541 DTNBO60941 627 aa6.48□□□□□ -1.37
PTPN3-202ENST00000374541 ADH1CP00326 375 aa6.48□□□□□ -1.37
PTPN3-202ENST00000374541 GYS2P54840 703 aa6.48□□□□□ -1.37
PTPN3-202ENST00000374541 SEC13P55735 322 aa6.48□□□□□ -1.37
PTPN3-202ENST00000374541 EIF3EP60228 445 aaKnown RBP6.48□□□□□ -1.37
PTPN3-202ENST00000374541 NCALDP61601 193 aa6.48□□□□□ -1.37
PTPN3-202ENST00000374541 LRRC14Q15048 493 aa6.48□□□□□ -1.37
PTPN3-202ENST00000374541 INAQ16352 499 aa6.48□□□□□ -1.37
PTPN3-202ENST00000374541 ARHGAP17Q68EM7 881 aa6.48□□□□□ -1.37
PTPN3-202ENST00000374541 SAMD3Q8N6K7 520 aa6.48□□□□□ -1.37
PTPN3-202ENST00000374541 DBF4BQ8NFT6 615 aa6.48□□□□□ -1.37
PTPN3-202ENST00000374541 HNRNPLLQ8WVV9 542 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms