RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 AKR1A1P14550 325 aa17.58■□□□□ 0.41
PHF1-202ENST00000374516 SP100P23497 879 aaPredicted RBP17.58■□□□□ 0.41
PHF1-202ENST00000374516 ADRA1DP25100 572 aa17.58■□□□□ 0.41
PHF1-202ENST00000374516 RBBP5Q15291 538 aaKnown RBP17.58■□□□□ 0.41
PHF1-202ENST00000374516 CXCL17Q6UXB2 119 aa17.58■□□□□ 0.41
PHF1-202ENST00000374516 RCOR2Q8IZ40 523 aa17.58■□□□□ 0.41
PHF1-202ENST00000374516 ALLCQ8N6M5 410 aa17.58■□□□□ 0.41
PHF1-202ENST00000374516 BEST2Q8NFU1 509 aa17.58■□□□□ 0.41
PHF1-202ENST00000374516 RFWD2Q8NHY2 731 aa17.58■□□□□ 0.41
PHF1-202ENST00000374516 TUBB6Q9BUF5 446 aa17.58■□□□□ 0.41
PHF1-202ENST00000374516 GOLGA2P5Q9HBQ8 144 aa17.58■□□□□ 0.41
PHF1-202ENST00000374516 ABT1Q9ULW3 272 aaKnown RBP17.58■□□□□ 0.41
PHF1-202ENST00000374516 NME7Q9Y5B8 376 aa17.58■□□□□ 0.41
PHF1-202ENST00000374516 SNUPNO95149 360 aaKnown RBP17.58■□□□□ 0.4
PHF1-202ENST00000374516 STAU1O95793 577 aaKnown RBP17.58■□□□□ 0.4
PHF1-202ENST00000374516 CETN2P41208 172 aa17.58■□□□□ 0.4
PHF1-202ENST00000374516 PSMC4P43686 418 aa17.58■□□□□ 0.4
PHF1-202ENST00000374516 RGS7P49802 495 aa17.58■□□□□ 0.4
PHF1-202ENST00000374516 GEMIN4P57678 1058 aaKnown RBP17.58■□□□□ 0.4
PHF1-202ENST00000374516 OVGP1Q12889 678 aa17.58■□□□□ 0.4
PHF1-202ENST00000374516 PDIA2Q13087 525 aaKnown RBP17.58■□□□□ 0.4
PHF1-202ENST00000374516 PPP1R26Q5T8A7 1209 aaPredicted RBP17.58■□□□□ 0.4
PHF1-202ENST00000374516 CENPUQ71F23 418 aa17.58■□□□□ 0.4
PHF1-202ENST00000374516 UCMAQ8WVF2 138 aa17.58■□□□□ 0.4
PHF1-202ENST00000374516 PTCD3Q96EY7 689 aaKnown RBP17.58■□□□□ 0.4
PHF1-202ENST00000374516 VCXQ9H320 206 aa17.58■□□□□ 0.4
PHF1-202ENST00000374516 ARL8BQ9NVJ2 186 aa17.58■□□□□ 0.4
PHF1-202ENST00000374516 GABRQQ9UN88 632 aa17.58■□□□□ 0.4
PHF1-202ENST00000374516 TRPM7Q96QT4 1865 aa17.57■□□□□ 0.4
PHF1-202ENST00000374516 SMIM28A0A1B0GU29 152 aa17.57■□□□□ 0.4
PHF1-202ENST00000374516 CFAP69A5D8W1 941 aa17.57■□□□□ 0.4
PHF1-202ENST00000374516 ANKRD33BA6NCL7 494 aa17.57■□□□□ 0.4
PHF1-202ENST00000374516 LRCH4O75427 683 aa17.57■□□□□ 0.4
PHF1-202ENST00000374516 IGHA2P01877 340 aa17.57■□□□□ 0.4
PHF1-202ENST00000374516 IL1R2P27930 398 aa17.57■□□□□ 0.4
PHF1-202ENST00000374516 RCN1Q15293 331 aa17.57■□□□□ 0.4
PHF1-202ENST00000374516 SEPT7Q16181 437 aaKnown RBP17.57■□□□□ 0.4
PHF1-202ENST00000374516 ZC3H12AQ5D1E8 599 aaKnown RBP17.57■□□□□ 0.4
PHF1-202ENST00000374516 UBXN11Q5T124 520 aa17.57■□□□□ 0.4
PHF1-202ENST00000374516 RNASEH2BQ5TBB1 312 aaKnown RBP17.57■□□□□ 0.4
PHF1-202ENST00000374516 C9orf57Q5W0N0 161 aa17.57■□□□□ 0.4
PHF1-202ENST00000374516 OR6B3Q8NGW1 331 aa17.57■□□□□ 0.4
PHF1-202ENST00000374516 NRG4Q8WWG1 115 aa17.57■□□□□ 0.4
PHF1-202ENST00000374516 SCG3Q8WXD2 468 aaKnown RBP17.57■□□□□ 0.4
PHF1-202ENST00000374516 HAUS1Q96CS2 278 aa17.57■□□□□ 0.4
PHF1-202ENST00000374516 PIWIL1Q96J94 861 aaKnown RBP17.57■□□□□ 0.4
PHF1-202ENST00000374516 KATNAL1Q9BW62 490 aa17.57■□□□□ 0.4
PHF1-202ENST00000374516 PIDD1Q9HB75 910 aa17.57■□□□□ 0.4
PHF1-202ENST00000374516 CNTN3Q9P232 1028 aa17.57■□□□□ 0.4
PHF1-202ENST00000374516 HEY2Q9UBP5 337 aa17.57■□□□□ 0.4
PHF1-202ENST00000374516 PCSK1NQ9UHG2 260 aa17.57■□□□□ 0.4
PHF1-202ENST00000374516 DRG1Q9Y295 367 aaKnown RBP17.57■□□□□ 0.4
PHF1-202ENST00000374516 LRCH1Q9Y2L9 728 aa17.57■□□□□ 0.4
PHF1-202ENST00000374516 DERAQ9Y315 318 aa17.57■□□□□ 0.4
PHF1-202ENST00000374516 Q9Y3F1 56 aa17.57■□□□□ 0.4
PHF1-202ENST00000374516 GRAP2O75791 330 aa17.56■□□□□ 0.4
PHF1-202ENST00000374516 TJP3O95049 919 aa17.56■□□□□ 0.4
PHF1-202ENST00000374516 GPX6P59796 221 aa17.56■□□□□ 0.4
PHF1-202ENST00000374516 OCRLQ01968 901 aa17.56■□□□□ 0.4
PHF1-202ENST00000374516 GOLGA7BQ2TAP0 167 aa17.56■□□□□ 0.4
PHF1-202ENST00000374516 ACSBG2Q5FVE4 666 aa17.56■□□□□ 0.4
PHF1-202ENST00000374516 EFHC2Q5JST6 749 aa17.56■□□□□ 0.4
PHF1-202ENST00000374516 FAM102AQ5T9C2 384 aaPredicted RBP17.56■□□□□ 0.4
PHF1-202ENST00000374516 OR52E8Q6IFG1 317 aa17.56■□□□□ 0.4
PHF1-202ENST00000374516 NIPA2Q8N8Q9 360 aa17.56■□□□□ 0.4
PHF1-202ENST00000374516 NSL1Q96IY1 281 aa17.56■□□□□ 0.4
PHF1-202ENST00000374516 RBM41Q96IZ5 413 aaKnown RBP17.56■□□□□ 0.4
PHF1-202ENST00000374516 RABGEF1Q9UJ41 708 aa17.56■□□□□ 0.4
PHF1-202ENST00000374516 A0A0G2JND7 137 aa17.56■□□□□ 0.4
PHF1-202ENST00000374516 E5RJQ4 531 aa17.56■□□□□ 0.4
PHF1-202ENST00000374516 GYG2O15488 501 aa17.56■□□□□ 0.4
PHF1-202ENST00000374516 PFKMP08237 780 aa17.56■□□□□ 0.4
PHF1-202ENST00000374516 PDGFRBP09619 1106 aa17.56■□□□□ 0.4
PHF1-202ENST00000374516 CRYBB1P53674 252 aaPredicted RBP17.56■□□□□ 0.4
PHF1-202ENST00000374516 PCBP1Q15365 356 aaKnown RBP eCLIP17.56■□□□□ 0.41e-8■■■■■ 29.6
PHF1-202ENST00000374516 SOWAHAQ2M3V2 549 aa17.56■□□□□ 0.4
PHF1-202ENST00000374516 LRRC38Q5VT99 294 aa17.56■□□□□ 0.4
PHF1-202ENST00000374516 CWF19L1Q69YN2 538 aaKnown RBP17.56■□□□□ 0.4
PHF1-202ENST00000374516 LCLAT1Q6UWP7 414 aa17.56■□□□□ 0.4
PHF1-202ENST00000374516 SPOCD1Q6ZMY3 1216 aa17.56■□□□□ 0.4
PHF1-202ENST00000374516 ANKMY2Q8IV38 441 aa17.56■□□□□ 0.4
PHF1-202ENST00000374516 ARRDC4Q8NCT1 418 aa17.56■□□□□ 0.4
PHF1-202ENST00000374516 TCP10LQ8TDR4 215 aa17.56■□□□□ 0.4
PHF1-202ENST00000374516 TRIB2Q92519 343 aa17.56■□□□□ 0.4
PHF1-202ENST00000374516 VPS11Q9H270 941 aa17.56■□□□□ 0.4
PHF1-202ENST00000374516 DPEP3Q9H4B8 488 aa17.56■□□□□ 0.4
PHF1-202ENST00000374516 MANSC1Q9H8J5 431 aa17.56■□□□□ 0.4
PHF1-202ENST00000374516 SPTLC1O15269 473 aa17.55■□□□□ 0.4
PHF1-202ENST00000374516 HAUS5O94927 633 aa17.55■□□□□ 0.4
PHF1-202ENST00000374516 SKIP12755 728 aa17.55■□□□□ 0.4
PHF1-202ENST00000374516 ROR2Q01974 943 aaKnown RBP17.55■□□□□ 0.4
PHF1-202ENST00000374516 SLC34A1Q06495 639 aa17.55■□□□□ 0.4
PHF1-202ENST00000374516 SOX4Q06945 474 aaPredicted RBP17.55■□□□□ 0.4
PHF1-202ENST00000374516 TRIM32Q13049 653 aa17.55■□□□□ 0.4
PHF1-202ENST00000374516 KPNB1Q14974 876 aaKnown RBP17.55■□□□□ 0.4
PHF1-202ENST00000374516 ZNF618Q5T7W0 954 aa17.55■□□□□ 0.4
PHF1-202ENST00000374516 SH3PXD2AQ5TCZ1 1133 aa17.55■□□□□ 0.4
PHF1-202ENST00000374516 RNF220Q5VTB9 566 aa17.55■□□□□ 0.4
PHF1-202ENST00000374516 TWF2Q6IBS0 349 aaKnown RBP17.55■□□□□ 0.4
PHF1-202ENST00000374516 TRIM55Q9BYV6 548 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms