RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 BCAR1P56945 870 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 YWHAGP61981 247 aaKnown RBP eCLIP14.48□□□□□ -0.09
HMGCL-203ENST00000374490 CDC42EP1Q00587 391 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 MMRN1Q13201 1228 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 CCDC14Q49A88 953 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 PKDCCQ504Y2 493 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 OLFML1Q6UWY5 402 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 ARCQ7LC44 396 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 TMEM110Q86TL2 294 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 SLC26A11Q86WA9 606 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 LRRC52Q8N7C0 313 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 PLD5Q8N7P1 536 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 ANKLE1Q8NAG6 615 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 OR6J1Q8NGC5 347 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 TCP10LQ8TDR4 215 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 SOCS4Q8WXH5 440 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 EBF2Q9HAK2 575 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 USP29Q9HBJ7 922 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 PCDH18Q9HCL0 1135 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 GABRQQ9UN88 632 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.48□□□□□ -0.09
HMGCL-203ENST00000374490 TCRBV9S1A1TA0A576 114 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 KBTBD13C9JR72 458 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 LPXNO60711 386 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 KRT37O76014 449 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 TGDSO95455 350 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 DHRS4L1P0CG22 281 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 SMPD1P17405 629 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 ADRA1DP25100 572 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 PTPN9P43378 593 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 IRF5Q13568 498 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 PCBP1Q15365 356 aaKnown RBP eCLIP14.48□□□□□ -0.09
HMGCL-203ENST00000374490 TTC39BQ5VTQ0 682 aaPredicted RBP14.48□□□□□ -0.09
HMGCL-203ENST00000374490 ARHGAP17Q68EM7 881 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 TRNP1Q6NT89 227 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 NPNTQ6UXI9 565 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 ZC3H18Q86VM9 953 aaKnown RBP14.48□□□□□ -0.09
HMGCL-203ENST00000374490 PXYLP1Q8TE99 480 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 SPOCK2Q92563 424 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 TRIM55Q9BYV6 548 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 UNC93B1Q9H1C4 597 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 MANSC1Q9H8J5 431 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 SLCO1B3Q9NPD5 702 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 RAB6BQ9NRW1 208 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 MKS1Q9NXB0 559 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 DOCK3Q8IZD9 2030 aa14.47□□□□□ -0.09
HMGCL-203ENST00000374490 TRAFD1O14545 582 aaPredicted RBP14.47□□□□□ -0.09
HMGCL-203ENST00000374490 KLF11O14901 512 aa14.47□□□□□ -0.09
HMGCL-203ENST00000374490 KCNN4O15554 427 aa14.47□□□□□ -0.09
HMGCL-203ENST00000374490 VTNP04004 478 aa14.47□□□□□ -0.09
HMGCL-203ENST00000374490 INHAP05111 366 aa14.47□□□□□ -0.09
HMGCL-203ENST00000374490 YWHAZP63104 245 aaKnown RBP14.47□□□□□ -0.09
HMGCL-203ENST00000374490 C15orf59Q2T9L4 293 aaPredicted RBP14.47□□□□□ -0.09
HMGCL-203ENST00000374490 C1orf228Q6PIY5 440 aa14.47□□□□□ -0.09
HMGCL-203ENST00000374490 DPH6Q7L8W6 267 aa14.47□□□□□ -0.09
HMGCL-203ENST00000374490 NLRP9Q7RTR0 991 aa14.47□□□□□ -0.09
HMGCL-203ENST00000374490 UBE2Q1Q7Z7E8 422 aa14.47□□□□□ -0.09
HMGCL-203ENST00000374490 KIF2BQ8N4N8 673 aa14.47□□□□□ -0.09
HMGCL-203ENST00000374490 BEST2Q8NFU1 509 aa14.47□□□□□ -0.09
HMGCL-203ENST00000374490 FAM172AQ8WUF8 416 aa14.47□□□□□ -0.09
HMGCL-203ENST00000374490 ZBTB10Q96DT7 871 aa14.47□□□□□ -0.09
HMGCL-203ENST00000374490 MTBPQ96DY7 904 aa14.47□□□□□ -0.09
HMGCL-203ENST00000374490 ANKRD27Q96NW4 1050 aa14.47□□□□□ -0.09
HMGCL-203ENST00000374490 TSPAN18Q96SJ8 248 aa14.47□□□□□ -0.09
HMGCL-203ENST00000374490 APBA2Q99767 749 aa14.47□□□□□ -0.09
HMGCL-203ENST00000374490 GCOM2Q9BZD3 368 aaPredicted RBP14.47□□□□□ -0.09
HMGCL-203ENST00000374490 ZFP69BQ9UJL9 534 aa14.47□□□□□ -0.09
HMGCL-203ENST00000374490 ZNF189O75820 626 aaPredicted RBP14.46□□□□□ -0.09
HMGCL-203ENST00000374490 SNRPAP09012 282 aaKnown RBP14.46□□□□□ -0.09
HMGCL-203ENST00000374490 ZNF286BP0CG31 522 aa14.46□□□□□ -0.09
HMGCL-203ENST00000374490 ELNP15502 786 aa14.46□□□□□ -0.09
HMGCL-203ENST00000374490 TPSB2P20231 275 aa14.46□□□□□ -0.09
HMGCL-203ENST00000374490 CYP2B6P20813 491 aa14.46□□□□□ -0.09
HMGCL-203ENST00000374490 PRKCHP24723 683 aa14.46□□□□□ -0.09
HMGCL-203ENST00000374490 E2F5Q15329 346 aa14.46□□□□□ -0.09
HMGCL-203ENST00000374490 TPSAB1Q15661 275 aa14.46□□□□□ -0.09
HMGCL-203ENST00000374490 DGKDQ16760 1214 aa14.46□□□□□ -0.09
HMGCL-203ENST00000374490 KBTBD12Q3ZCT8 623 aa14.46□□□□□ -0.09
HMGCL-203ENST00000374490 SCYL2Q6P3W7 929 aa14.46□□□□□ -0.09
HMGCL-203ENST00000374490 PQLC3Q8N755 202 aa14.46□□□□□ -0.09
HMGCL-203ENST00000374490 CFAP61Q8NHU2 1237 aa14.46□□□□□ -0.09
HMGCL-203ENST00000374490 AGAP11Q8TF27 550 aa14.46□□□□□ -0.09
HMGCL-203ENST00000374490 MYCBPQ99417 103 aaPredicted RBP14.46□□□□□ -0.09
HMGCL-203ENST00000374490 SNRNP25Q9BV90 132 aaKnown RBP14.46□□□□□ -0.09
HMGCL-203ENST00000374490 TSSK1BQ9BXA7 367 aa14.46□□□□□ -0.09
HMGCL-203ENST00000374490 IQCGQ9H095 443 aaKnown RBP14.46□□□□□ -0.09
HMGCL-203ENST00000374490 NGRNQ9NPE2 291 aaKnown RBP14.46□□□□□ -0.09
HMGCL-203ENST00000374490 ETNK2Q9NVF9 386 aa14.46□□□□□ -0.09
HMGCL-203ENST00000374490 LNPEPQ9UIQ6 1025 aa14.46□□□□□ -0.09
HMGCL-203ENST00000374490 STK38LQ9Y2H1 464 aa14.46□□□□□ -0.09
HMGCL-203ENST00000374490 MTO1Q9Y2Z2 717 aaKnown RBP14.46□□□□□ -0.09
HMGCL-203ENST00000374490 MGAMO43451 1857 aa14.46□□□□□ -0.09
HMGCL-203ENST00000374490 RRN3P2A6NIE6 340 aa14.45□□□□□ -0.1
HMGCL-203ENST00000374490 MMP3P08254 477 aa14.45□□□□□ -0.1
HMGCL-203ENST00000374490 HOXD8P13378 290 aaPredicted RBP14.45□□□□□ -0.1
HMGCL-203ENST00000374490 ACADSBP45954 432 aa14.45□□□□□ -0.1
HMGCL-203ENST00000374490 NR2C2P49116 596 aa14.45□□□□□ -0.1
HMGCL-203ENST00000374490 SERPINB9P50453 376 aa14.45□□□□□ -0.1
HMGCL-203ENST00000374490 FAAP100Q0VG06 881 aa14.45□□□□□ -0.1
HMGCL-203ENST00000374490 GRIK4Q16099 956 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms