RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 ANKRD22Q5VYY1 191 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 FAM109BQ6ICB4 259 aaPredicted RBP12.59□□□□□ -0.39
HMGCL-202ENST00000374487 PPP1R21Q6ZMI0 780 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 PIGWQ7Z7B1 504 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 STK32AQ8WU08 396 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 MAML1Q92585 1016 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 RNF157Q96PX1 679 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 NCAPGQ9BPX3 1015 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 B3GNT5Q9BYG0 378 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 DPEP3Q9H4B8 488 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 HEY1Q9Y5J3 304 aa12.59□□□□□ -0.39
HMGCL-202ENST00000374487 SCN5AQ14524 2016 aa12.58□□□□□ -0.4
HMGCL-202ENST00000374487 TRIOBPQ9H2D6 2365 aa12.58□□□□□ -0.4
HMGCL-202ENST00000374487 DPYSL4O14531 572 aa12.58□□□□□ -0.4
HMGCL-202ENST00000374487 PAPSS1O43252 624 aaPredicted RBP12.58□□□□□ -0.4
HMGCL-202ENST00000374487 ADORA2BP29275 332 aa12.58□□□□□ -0.4
HMGCL-202ENST00000374487 PNPLA4P41247 253 aa12.58□□□□□ -0.4
HMGCL-202ENST00000374487 GAD2Q05329 585 aa12.58□□□□□ -0.4
HMGCL-202ENST00000374487 MPP2Q14168 576 aa12.58□□□□□ -0.4
HMGCL-202ENST00000374487 NOMO1Q15155 1222 aa12.58□□□□□ -0.4
HMGCL-202ENST00000374487 CCDC142Q17RM4 750 aa12.58□□□□□ -0.4
HMGCL-202ENST00000374487 ZC3H12AQ5D1E8 599 aaKnown RBP12.58□□□□□ -0.4
HMGCL-202ENST00000374487 FNBP1LQ5T0N5 605 aa12.58□□□□□ -0.4
HMGCL-202ENST00000374487 ARHGAP17Q68EM7 881 aa12.58□□□□□ -0.4
HMGCL-202ENST00000374487 C3orf62Q6ZUJ4 267 aa12.58□□□□□ -0.4
HMGCL-202ENST00000374487 CYP4V2Q6ZWL3 525 aaPredicted RBP12.58□□□□□ -0.4
HMGCL-202ENST00000374487 OTOP2Q7RTS6 562 aa12.58□□□□□ -0.4
HMGCL-202ENST00000374487 SERINC5Q86VE9 423 aa12.58□□□□□ -0.4
HMGCL-202ENST00000374487 TDRPQ86YL5 185 aa12.58□□□□□ -0.4
HMGCL-202ENST00000374487 PALM2Q8IXS6 379 aa12.58□□□□□ -0.4
HMGCL-202ENST00000374487 ATP11CQ8NB49 1132 aa12.58□□□□□ -0.4
HMGCL-202ENST00000374487 APPL2Q8NEU8 664 aa12.58□□□□□ -0.4
HMGCL-202ENST00000374487 TMEM40Q8WWA1 233 aa12.58□□□□□ -0.4
HMGCL-202ENST00000374487 ZNF560Q96MR9 790 aa12.58□□□□□ -0.4
HMGCL-202ENST00000374487 TBCBQ99426 244 aa12.58□□□□□ -0.4
HMGCL-202ENST00000374487 PAIP2Q9BPZ3 127 aaKnown RBP12.58□□□□□ -0.4
HMGCL-202ENST00000374487 LPIN3Q9BQK8 851 aa12.58□□□□□ -0.4
HMGCL-202ENST00000374487 PPCSQ9HAB8 311 aa12.58□□□□□ -0.4
HMGCL-202ENST00000374487 GPATCH2LQ9NWQ4 482 aa12.58□□□□□ -0.4
HMGCL-202ENST00000374487 CXXC1Q9P0U4 656 aaPredicted RBP12.58□□□□□ -0.4
HMGCL-202ENST00000374487 NME7Q9Y5B8 376 aa12.58□□□□□ -0.4
HMGCL-202ENST00000374487 CITO14578 2027 aa12.58□□□□□ -0.4
HMGCL-202ENST00000374487 FAM47DPA6NHR8 397 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 PIRO00625 290 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 APOL1O14791 398 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 FSBPO95073 299 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 CCDC130P13994 396 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 BCAT1P54687 386 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 BCAR1P56945 870 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 BST2Q10589 180 aaKnown RBP12.57□□□□□ -0.4
HMGCL-202ENST00000374487 ITIH4Q14624 930 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 BBS9Q3SYG4 887 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 PPP6R3Q5H9R7 873 aaPredicted RBP12.57□□□□□ -0.4
HMGCL-202ENST00000374487 NUGGCQ68CJ6 796 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 ANKRD52Q8NB46 1076 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 TEKT4Q8WW24 435 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 CKAP2Q8WWK9 683 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 LRCH3Q96II8 777 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 SMC6Q96SB8 1091 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 PHACTR1Q9C0D0 580 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 UBN1Q9NPG3 1134 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 EURLQ9NYK6 297 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 SLC24A2Q9UI40 661 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 GRXCR1A8MXD5 290 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 HCRTO43612 131 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 HUS1O60921 280 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 NBNO60934 754 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 LCP1P13796 627 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 ATP2A2P16615 1042 aaKnown RBP12.57□□□□□ -0.4
HMGCL-202ENST00000374487 LMO2P25791 158 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 GCAP28676 217 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 SSTR1P30872 391 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 TAF6P49848 677 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 NRLP54845 237 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 GEMIN4P57678 1058 aaKnown RBP12.57□□□□□ -0.4
HMGCL-202ENST00000374487 IL9RQ01113 521 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 RNASELQ05823 741 aaKnown RBP12.57□□□□□ -0.4
HMGCL-202ENST00000374487 ACTN3Q08043 901 aaPredicted RBP12.57□□□□□ -0.4
HMGCL-202ENST00000374487 PTK7Q13308 1070 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 MTM1Q13496 603 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 ANKRD20A8PQ5CZ79 823 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 TMEM240Q5SV17 173 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 TRABD2AQ86V40 505 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 PLD5Q8N7P1 536 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 FBXO36Q8NEA4 188 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 SGSM3Q96HU1 749 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 TGS1Q96RS0 853 aaKnown RBP12.57□□□□□ -0.4
HMGCL-202ENST00000374487 RNF39Q9H2S5 420 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 ACTR5Q9H9F9 607 aaPredicted RBP12.57□□□□□ -0.4
HMGCL-202ENST00000374487 FGFR1OP2Q9NVK5 253 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 SENP1Q9P0U3 644 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 PSMC3IPQ9P2W1 217 aaPredicted RBP12.57□□□□□ -0.4
HMGCL-202ENST00000374487 CDH23Q9H251 3354 aa12.57□□□□□ -0.4
HMGCL-202ENST00000374487 TCRBV7S3A2A0A539 114 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 KCNN4O15554 427 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 ATP2C2O75185 946 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 SPAG7O75391 227 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 CPP00450 1065 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 GNAT1P11488 350 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 TGM2P21980 687 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms