RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 LRRC8DQ7L1W4 858 aa14.75□□□□□ -0.05
TRAF1-201ENST00000373887 ZFYVE1Q9HBF4 777 aa14.75□□□□□ -0.05
TRAF1-201ENST00000373887 UVRAGQ9P2Y5 699 aa14.75□□□□□ -0.05
TRAF1-201ENST00000373887 ATP6V1HQ9UI12 483 aa14.75□□□□□ -0.05
TRAF1-201ENST00000373887 CCT8L1PA6NM43 557 aa14.75□□□□□ -0.05
TRAF1-201ENST00000373887 GOLGA8TH3BQL2 631 aa14.75□□□□□ -0.05
TRAF1-201ENST00000373887 SUPT7LO94864 414 aa14.75□□□□□ -0.05
TRAF1-201ENST00000373887 PGK1P00558 417 aa14.75□□□□□ -0.05
TRAF1-201ENST00000373887 PTGER2P43116 358 aa14.75□□□□□ -0.05
TRAF1-201ENST00000373887 CTCFP49711 727 aaPredicted RBP14.75□□□□□ -0.05
TRAF1-201ENST00000373887 KPNA1P52294 538 aaPredicted RBP14.75□□□□□ -0.05
TRAF1-201ENST00000373887 FEZF2Q8TBJ5 459 aa14.75□□□□□ -0.05
TRAF1-201ENST00000373887 EHD4Q9H223 541 aa14.75□□□□□ -0.05
TRAF1-201ENST00000373887 HOXA2O43364 376 aa14.75□□□□□ -0.05
TRAF1-201ENST00000373887 SOAT2O75908 522 aa14.75□□□□□ -0.05
TRAF1-201ENST00000373887 COPS5Q92905 334 aa14.75□□□□□ -0.05
TRAF1-201ENST00000373887 CYP4F12Q9HCS2 524 aa14.75□□□□□ -0.05
TRAF1-201ENST00000373887 ITGAXP20702 1163 aa14.75□□□□□ -0.05
TRAF1-201ENST00000373887 TYW3Q6IPR3 259 aaKnown RBP14.75□□□□□ -0.05
TRAF1-201ENST00000373887 PLEKHA7Q6IQ23 1121 aa14.75□□□□□ -0.05
TRAF1-201ENST00000373887 TMC5Q6UXY8 1006 aa14.75□□□□□ -0.05
TRAF1-201ENST00000373887 FAM83AQ86UY5 434 aa14.75□□□□□ -0.05
TRAF1-201ENST00000373887 C19orf60Q96EN9 201 aa14.75□□□□□ -0.05
TRAF1-201ENST00000373887 IL17RBQ9NRM6 502 aa14.75□□□□□ -0.05
TRAF1-201ENST00000373887 GLRBP48167 497 aa14.74□□□□□ -0.05
TRAF1-201ENST00000373887 PSMD7P51665 324 aa14.74□□□□□ -0.05
TRAF1-201ENST00000373887 CCL23P55773 120 aa14.74□□□□□ -0.05
TRAF1-201ENST00000373887 YWHAZP63104 245 aaKnown RBP14.74□□□□□ -0.05
TRAF1-201ENST00000373887 DEFB115Q30KQ5 88 aa14.74□□□□□ -0.05
TRAF1-201ENST00000373887 TRPM4Q8TD43 1214 aa14.74□□□□□ -0.05
TRAF1-201ENST00000373887 EDEM1Q92611 657 aa14.74□□□□□ -0.05
TRAF1-201ENST00000373887 RUBCNQ92622 972 aa14.74□□□□□ -0.05
TRAF1-201ENST00000373887 DDX43Q9NXZ2 648 aaKnown RBP14.74□□□□□ -0.05
TRAF1-201ENST00000373887 CYP39A1Q9NYL5 469 aa14.74□□□□□ -0.05
TRAF1-201ENST00000373887 A0A1B0GTH6 734 aa14.74□□□□□ -0.05
TRAF1-201ENST00000373887 GEMIN4P57678 1058 aaKnown RBP14.74□□□□□ -0.05
TRAF1-201ENST00000373887 MYL6P60660 151 aa14.74□□□□□ -0.05
TRAF1-201ENST00000373887 EDRF1Q3B7T1 1238 aa14.74□□□□□ -0.05
TRAF1-201ENST00000373887 SCUBE2Q9NQ36 999 aa14.74□□□□□ -0.05
TRAF1-201ENST00000373887 TRPM5Q9NZQ8 1165 aa14.74□□□□□ -0.05
TRAF1-201ENST00000373887 TRIM49D1C9J1S8 452 aa14.74□□□□□ -0.05
TRAF1-201ENST00000373887 ACADMP11310 421 aa14.74□□□□□ -0.05
TRAF1-201ENST00000373887 C4BPBP20851 252 aa14.74□□□□□ -0.05
TRAF1-201ENST00000373887 C16orf72Q14CZ0 275 aa14.74□□□□□ -0.05
TRAF1-201ENST00000373887 POLD3Q15054 466 aaPredicted RBP14.74□□□□□ -0.05
TRAF1-201ENST00000373887 NCF4Q15080 339 aa14.74□□□□□ -0.05
TRAF1-201ENST00000373887 APOBEC3HQ6NTF7 200 aaKnown RBP14.74□□□□□ -0.05
TRAF1-201ENST00000373887 THAP2Q9H0W7 228 aa14.74□□□□□ -0.05
TRAF1-201ENST00000373887 COPS7BQ9H9Q2 264 aaPredicted RBP14.74□□□□□ -0.05
TRAF1-201ENST00000373887 FAM153AQ9UHL3 310 aa14.74□□□□□ -0.05
TRAF1-201ENST00000373887 HAO1Q9UJM8 370 aa14.74□□□□□ -0.05
TRAF1-201ENST00000373887 NR5A2O00482 541 aa14.74□□□□□ -0.05
TRAF1-201ENST00000373887 GAS2O43903 313 aaKnown RBP14.74□□□□□ -0.05
TRAF1-201ENST00000373887 KIAA1683Q9H0B3 1180 aa14.74□□□□□ -0.05
TRAF1-201ENST00000373887 VPS28Q9UK41 221 aa14.74□□□□□ -0.05
TRAF1-201ENST00000373887 FBXL21Q9UKT6 434 aa14.74□□□□□ -0.05
TRAF1-201ENST00000373887 CXCL11O14625 94 aa14.74□□□□□ -0.05
TRAF1-201ENST00000373887 IRF6O14896 467 aa14.74□□□□□ -0.05
TRAF1-201ENST00000373887 GIT2Q14161 759 aa14.74□□□□□ -0.05
TRAF1-201ENST00000373887 CCNI2Q6ZMN8 369 aaPredicted RBP14.74□□□□□ -0.05
TRAF1-201ENST00000373887 NOD2Q9HC29 1040 aa14.74□□□□□ -0.05
TRAF1-201ENST00000373887 CNGB3Q9NQW8 809 aa14.74□□□□□ -0.05
TRAF1-201ENST00000373887 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.74□□□□□ -0.05
TRAF1-201ENST00000373887 CYP7B1O75881 506 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 PSMC3P17980 439 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 GRIK5Q16478 980 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 ZCWPW2Q504Y3 356 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 DDI2Q5TDH0 399 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 SETD3Q86TU7 594 aaPredicted RBP14.73□□□□□ -0.05
TRAF1-201ENST00000373887 COMMD2Q86X83 199 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 B3GALNT2Q8NCR0 500 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 TFB1MQ8WVM0 346 aaKnown RBP14.73□□□□□ -0.05
TRAF1-201ENST00000373887 TMCC3Q9ULS5 477 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 BCL9O00512 1426 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 MAGEA13PA6NCF6 341 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 TRIM43BA6NCK2 446 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 TRIM24O15164 1050 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 AMHP03971 560 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 PLEKP08567 350 aaPredicted RBP14.73□□□□□ -0.05
TRAF1-201ENST00000373887 NFICP08651 508 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 DMPKQ09013 629 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 LLGL2Q6P1M3 1020 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 KLHL24Q6TFL4 600 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 NMD3Q96D46 503 aaKnown RBP14.73□□□□□ -0.05
TRAF1-201ENST00000373887 CBX4O00257 560 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 FOXP2O15409 715 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 SYNCRIPO60506 623 aaKnown RBP14.73□□□□□ -0.05
TRAF1-201ENST00000373887 PSEN2P49810 448 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 TRAF2Q12933 501 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 FAM83EQ2M2I3 478 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 ZNF280DQ6N043 979 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 CXCL17Q6UXB2 119 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 RD3Q7Z3Z2 195 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 DNERQ8NFT8 737 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 ATXN3LQ9H3M9 355 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 ATP6V1C1P21283 382 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 HSPA13P48723 471 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 DNAAF5Q86Y56 855 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 PALB2Q86YC2 1186 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 DAGLBQ8NCG7 672 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms