RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 BIRC5O15392 142 aa10.94□□□□□ -0.66
PGK1-201ENST00000373316 ATP6V1G2O95670 118 aa10.94□□□□□ -0.66
PGK1-201ENST00000373316 ITGAVP06756 1048 aa10.94□□□□□ -0.66
PGK1-201ENST00000373316 ARP10275 920 aa10.94□□□□□ -0.66
PGK1-201ENST00000373316 KITP10721 976 aa10.94□□□□□ -0.66
PGK1-201ENST00000373316 BRD2P25440 801 aaKnown RBP10.94□□□□□ -0.66
PGK1-201ENST00000373316 NCKAP1LP55160 1127 aa10.94□□□□□ -0.66
PGK1-201ENST00000373316 PSMC6P62333 389 aa10.94□□□□□ -0.66
PGK1-201ENST00000373316 ERVK-9P63128 1117 aa10.94□□□□□ -0.66
PGK1-201ENST00000373316 OTUD4Q01804 1114 aaKnown RBP10.94□□□□□ -0.66
PGK1-201ENST00000373316 KRT72Q14CN4 511 aa10.94□□□□□ -0.66
PGK1-201ENST00000373316 HP1BP3Q5SSJ5 553 aaPredicted RBP10.94□□□□□ -0.66
PGK1-201ENST00000373316 OR6P1Q8NGX9 317 aa10.94□□□□□ -0.66
PGK1-201ENST00000373316 UTP6Q9NYH9 597 aaKnown RBP10.94□□□□□ -0.66
PGK1-201ENST00000373316 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.94□□□□□ -0.66
PGK1-201ENST00000373316 ENOPH1Q9UHY7 261 aa10.94□□□□□ -0.66
PGK1-201ENST00000373316 TMEM150BA6NC51 233 aa10.94□□□□□ -0.66
PGK1-201ENST00000373316 TMEM114B3SHH9 223 aa10.94□□□□□ -0.66
PGK1-201ENST00000373316 DFFAO00273 331 aa10.94□□□□□ -0.66
PGK1-201ENST00000373316 ADCY3O60266 1144 aa10.94□□□□□ -0.66
PGK1-201ENST00000373316 ZNF280AP59817 542 aaPredicted RBP10.94□□□□□ -0.66
PGK1-201ENST00000373316 PDE1CQ14123 709 aaPredicted RBP10.94□□□□□ -0.66
PGK1-201ENST00000373316 MYLK4Q86YV6 388 aaPredicted RBP10.94□□□□□ -0.66
PGK1-201ENST00000373316 ZNF557Q8N988 423 aaPredicted RBP10.94□□□□□ -0.66
PGK1-201ENST00000373316 FAM71DQ8N9W8 422 aa10.94□□□□□ -0.66
PGK1-201ENST00000373316 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.94□□□□□ -0.66
PGK1-201ENST00000373316 TRPC4APQ8TEL6 797 aa10.94□□□□□ -0.66
PGK1-201ENST00000373316 CKAP2Q8WWK9 683 aa10.94□□□□□ -0.66
PGK1-201ENST00000373316 DCUN1D1Q96GG9 259 aa10.94□□□□□ -0.66
PGK1-201ENST00000373316 NAF1Q96HR8 494 aaKnown RBP10.94□□□□□ -0.66
PGK1-201ENST00000373316 NRDE2Q9H7Z3 1164 aa10.94□□□□□ -0.66
PGK1-201ENST00000373316 CISHQ9NSE2 258 aa10.94□□□□□ -0.66
PGK1-201ENST00000373316 SLC30A1Q9Y6M5 507 aa10.94□□□□□ -0.66
PGK1-201ENST00000373316 SAC3D1A6NKF1 404 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 KLHL41O60662 606 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 GP5P40197 560 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 ERMARDQ5T6L9 678 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 BNC2Q6ZN30 1099 aaPredicted RBP10.93□□□□□ -0.66
PGK1-201ENST00000373316 ANKS3Q6ZW76 656 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 DDX42Q86XP3 938 aaKnown RBP eCLIP10.93□□□□□ -0.666e-10■■□□□ 14.4
PGK1-201ENST00000373316 RIN2Q8WYP3 895 aaPredicted RBP10.93□□□□□ -0.66
PGK1-201ENST00000373316 PPP2R3CQ969Q6 453 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 ELP3Q9H9T3 547 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 SCN3BQ9NY72 215 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 COL1A2P08123 1366 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 A0A087X1B8 175 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 C17orf102A2RUQ5 167 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 VGLL3A8MV65 326 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 CASP4P49662 377 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 SEC24CP53992 1094 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 FBXW10Q5XX13 1052 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 PDPK2PQ6A1A2 396 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 IRGCQ6NXR0 463 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 EPS8L3Q8TE67 593 aaKnown RBP10.93□□□□□ -0.66
PGK1-201ENST00000373316 TATDN2Q93075 761 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 EME1Q96AY2 570 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 OTUD5Q96G74 571 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 BTBD10Q9BSF8 475 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 FGFBP2Q9BYJ0 223 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.93□□□□□ -0.663e-8■■■□□ 16.4
PGK1-201ENST00000373316 NCKIPSDQ9NZQ3 722 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 LRCH1Q9Y2L9 728 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 FRMD3A2A2Y4 597 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 MTA2O94776 668 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 PSMA4P25789 261 aaKnown RBP10.93□□□□□ -0.66
PGK1-201ENST00000373316 XRCC4Q13426 336 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 MAP1SQ66K74 1059 aaPredicted RBP10.93□□□□□ -0.66
PGK1-201ENST00000373316 MFSD5Q6N075 450 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 GLB1LQ6UWU2 654 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 DDIASQ8IXT1 998 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 AADATQ8N5Z0 425 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 STARD8Q92502 1023 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 EGFL8Q99944 293 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 CBWD1Q9BRT8 395 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 RMND5AQ9H871 391 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 ZFYVE28Q9HCC9 887 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 FETUBQ9UGM5 382 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 NAALADL1Q9UQQ1 740 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 FIS1Q9Y3D6 152 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 CCDC78A2IDD5 438 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 FSCN2O14926 492 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 RRM1P23921 792 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 TTKP33981 857 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 HTR7P34969 479 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 GRIK1P39086 918 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 PEX5P50542 639 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 PPARDQ03181 441 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 EPS8Q12929 822 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 SEL1L3Q68CR1 1132 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 TMEM154Q6P9G4 183 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 PATL1Q86TB9 770 aaKnown RBP10.93□□□□□ -0.66
PGK1-201ENST00000373316 MAGED4Q96JG8 741 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 COLEC11Q9BWP8 271 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 PACSIN1Q9BY11 444 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 NINJ2Q9NZG7 142 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 DTNAQ9Y4J8 743 aa10.93□□□□□ -0.66
PGK1-201ENST00000373316 SIGLEC16A6NMB1 481 aa10.92□□□□□ -0.66
PGK1-201ENST00000373316 GRIN3BO60391 1043 aa10.92□□□□□ -0.66
PGK1-201ENST00000373316 ITGB3P05106 788 aa10.92□□□□□ -0.66
PGK1-201ENST00000373316 KCNA2P16389 499 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms