RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 CYLDQ9NQC7 956 aa24.73■■□□□ 1.55
CDK9-201ENST00000373264 PAK5Q9P286 719 aa24.73■■□□□ 1.55
CDK9-201ENST00000373264 SYNJ2BP-COX16A0A087WUM0 186 aa24.73■■□□□ 1.55
CDK9-201ENST00000373264 C2orf71A6NGG8 1288 aa24.73■■□□□ 1.55
CDK9-201ENST00000373264 LPXNO60711 386 aa24.73■■□□□ 1.55
CDK9-201ENST00000373264 UNC5CO95185 931 aa24.73■■□□□ 1.55
CDK9-201ENST00000373264 TRMT10BQ6PF06 316 aaKnown RBP24.73■■□□□ 1.55
CDK9-201ENST00000373264 ALKAL1Q6UXT8 129 aa24.73■■□□□ 1.55
CDK9-201ENST00000373264 VSIG1Q86XK7 387 aa24.73■■□□□ 1.55
CDK9-201ENST00000373264 NT5DC4Q86YG4 428 aa24.73■■□□□ 1.55
CDK9-201ENST00000373264 LRRC37BQ96QE4 947 aa24.73■■□□□ 1.55
CDK9-201ENST00000373264 PPCSQ9HAB8 311 aa24.73■■□□□ 1.55
CDK9-201ENST00000373264 COX16Q9P0S2 106 aa24.73■■□□□ 1.55
CDK9-201ENST00000373264 PIN4Q9Y237 131 aaKnown RBP24.73■■□□□ 1.55
CDK9-201ENST00000373264 USH1CQ9Y6N9 552 aa24.73■■□□□ 1.55
CDK9-201ENST00000373264 INHBAP08476 426 aa24.72■■□□□ 1.55
CDK9-201ENST00000373264 AMPD1P23109 780 aa24.72■■□□□ 1.55
CDK9-201ENST00000373264 ACCSLQ4AC99 568 aa24.72■■□□□ 1.55
CDK9-201ENST00000373264 ZNF534Q76KX8 674 aa24.72■■□□□ 1.55
CDK9-201ENST00000373264 BEST2Q8NFU1 509 aa24.72■■□□□ 1.55
CDK9-201ENST00000373264 AGAP11Q8TF27 550 aa24.72■■□□□ 1.55
CDK9-201ENST00000373264 TTC17Q96AE7 1141 aa24.72■■□□□ 1.55
CDK9-201ENST00000373264 TBCBQ99426 244 aa24.72■■□□□ 1.55
CDK9-201ENST00000373264 CEP41Q9BYV8 373 aa24.72■■□□□ 1.55
CDK9-201ENST00000373264 ZC3H7BQ9UGR2 993 aaKnown RBP24.72■■□□□ 1.55
CDK9-201ENST00000373264 SMIM28A0A1B0GU29 152 aa24.72■■□□□ 1.55
CDK9-201ENST00000373264 CLDN5O00501 218 aa24.72■■□□□ 1.55
CDK9-201ENST00000373264 T-ENOLP0DO92 83 aa24.72■■□□□ 1.55
CDK9-201ENST00000373264 CYP2C9P11712 490 aa24.72■■□□□ 1.55
CDK9-201ENST00000373264 CCNB1P14635 433 aa24.72■■□□□ 1.55
CDK9-201ENST00000373264 TGM2P21980 687 aa24.72■■□□□ 1.55
CDK9-201ENST00000373264 FAM131BQ86XD5 332 aa24.72■■□□□ 1.55
CDK9-201ENST00000373264 UNC5BQ8IZJ1 945 aa24.72■■□□□ 1.55
CDK9-201ENST00000373264 ARRDC4Q8NCT1 418 aa24.72■■□□□ 1.55
CDK9-201ENST00000373264 TEKT4Q8WW24 435 aa24.72■■□□□ 1.55
CDK9-201ENST00000373264 PTPN18Q99952 460 aa24.72■■□□□ 1.55
CDK9-201ENST00000373264 PLCD4Q9BRC7 762 aa24.72■■□□□ 1.55
CDK9-201ENST00000373264 C11orf84Q9BUA3 381 aaPredicted RBP24.72■■□□□ 1.55
CDK9-201ENST00000373264 AP4E1Q9UPM8 1137 aa24.72■■□□□ 1.55
CDK9-201ENST00000373264 CLEC11AQ9Y240 323 aa24.72■■□□□ 1.55
CDK9-201ENST00000373264 ATP2A2P16615 1042 aaKnown RBP24.71■■□□□ 1.55
CDK9-201ENST00000373264 GOT1P17174 413 aa24.71■■□□□ 1.55
CDK9-201ENST00000373264 GRB14Q14449 540 aa24.71■■□□□ 1.55
CDK9-201ENST00000373264 NOTUMQ6P988 496 aa24.71■■□□□ 1.55
CDK9-201ENST00000373264 KCNT2Q6UVM3 1135 aa24.71■■□□□ 1.55
CDK9-201ENST00000373264 RTP4Q96DX8 246 aa24.71■■□□□ 1.55
CDK9-201ENST00000373264 L3MBTL3Q96JM7 780 aaPredicted RBP24.71■■□□□ 1.55
CDK9-201ENST00000373264 PLEKHA5Q9HAU0 1116 aa24.71■■□□□ 1.55
CDK9-201ENST00000373264 IKBKGQ9Y6K9 419 aa24.71■■□□□ 1.55
CDK9-201ENST00000373264 TRIM49D1C9J1S8 452 aa24.71■■□□□ 1.55
CDK9-201ENST00000373264 MDM4O15151 490 aa24.71■■□□□ 1.55
CDK9-201ENST00000373264 TOP3BO95985 862 aaKnown RBP24.71■■□□□ 1.55
CDK9-201ENST00000373264 HOXD8P13378 290 aaPredicted RBP24.71■■□□□ 1.55
CDK9-201ENST00000373264 DARSP14868 501 aaKnown RBP24.71■■□□□ 1.55
CDK9-201ENST00000373264 ACAT1P24752 427 aaKnown RBP24.71■■□□□ 1.55
CDK9-201ENST00000373264 GNL1P36915 607 aaPredicted RBP24.71■■□□□ 1.55
CDK9-201ENST00000373264 STILQ15468 1287 aa24.71■■□□□ 1.55
CDK9-201ENST00000373264 FBXO47Q5MNV8 452 aa24.71■■□□□ 1.55
CDK9-201ENST00000373264 PRR11Q96HE9 360 aaPredicted RBP24.71■■□□□ 1.55
CDK9-201ENST00000373264 SYT17Q9BSW7 474 aa24.71■■□□□ 1.55
CDK9-201ENST00000373264 MECRQ9BV79 373 aa24.71■■□□□ 1.55
CDK9-201ENST00000373264 MANSC1Q9H8J5 431 aa24.71■■□□□ 1.55
CDK9-201ENST00000373264 SSU72Q9NP77 194 aaKnown RBP24.71■■□□□ 1.55
CDK9-201ENST00000373264 SLC17A6Q9P2U8 582 aa24.71■■□□□ 1.55
CDK9-201ENST00000373264 BCLAF3A2AJT9 711 aaKnown RBP24.7■■□□□ 1.54
CDK9-201ENST00000373264 STRNO43815 780 aa24.7■■□□□ 1.54
CDK9-201ENST00000373264 BEST1O76090 585 aa24.7■■□□□ 1.54
CDK9-201ENST00000373264 BGNP21810 368 aa24.7■■□□□ 1.54
CDK9-201ENST00000373264 CRADDP78560 199 aa24.7■■□□□ 1.54
CDK9-201ENST00000373264 STAMBPL1Q96FJ0 436 aa24.7■■□□□ 1.54
CDK9-201ENST00000373264 CSPG4P5Q96PW8 444 aa24.7■■□□□ 1.54
CDK9-201ENST00000373264 ZNF670Q9BS34 389 aa24.7■■□□□ 1.54
CDK9-201ENST00000373264 CNTN3Q9P232 1028 aa24.7■■□□□ 1.54
CDK9-201ENST00000373264 MAD1L1Q9Y6D9 718 aa24.7■■□□□ 1.54
CDK9-201ENST00000373264 SLC15A5A6NIM6 579 aa24.7■■□□□ 1.54
CDK9-201ENST00000373264 KPNA7A9QM74 516 aa24.7■■□□□ 1.54
CDK9-201ENST00000373264 TREHO43280 583 aa24.7■■□□□ 1.54
CDK9-201ENST00000373264 CSH1P0DML2 217 aa24.7■■□□□ 1.54
CDK9-201ENST00000373264 CSH2P0DML3 217 aa24.7■■□□□ 1.54
CDK9-201ENST00000373264 ETV4P43268 484 aa24.7■■□□□ 1.54
CDK9-201ENST00000373264 NEK3P51956 506 aa24.7■■□□□ 1.54
CDK9-201ENST00000373264 TAF1BQ53T94 588 aaPredicted RBP24.7■■□□□ 1.54
CDK9-201ENST00000373264 NLRP9Q7RTR0 991 aa24.7■■□□□ 1.54
CDK9-201ENST00000373264 MTDHQ86UE4 582 aaKnown RBP24.7■■□□□ 1.54
CDK9-201ENST00000373264 LGMNQ99538 433 aa24.7■■□□□ 1.54
CDK9-201ENST00000373264 ABHD16BQ9H3Z7 469 aa24.7■■□□□ 1.54
CDK9-201ENST00000373264 SPON1Q9HCB6 807 aa24.7■■□□□ 1.54
CDK9-201ENST00000373264 UNC5AQ6ZN44 842 aa24.69■■□□□ 1.54
CDK9-201ENST00000373264 OSTM1Q86WC4 334 aa24.69■■□□□ 1.54
CDK9-201ENST00000373264 TP53INP2Q8IXH6 220 aa24.69■■□□□ 1.54
CDK9-201ENST00000373264 TTC39CQ8N584 583 aa24.69■■□□□ 1.54
CDK9-201ENST00000373264 LRRC52Q8N7C0 313 aa24.69■■□□□ 1.54
CDK9-201ENST00000373264 ANKRD52Q8NB46 1076 aa24.69■■□□□ 1.54
CDK9-201ENST00000373264 PGLYRP2Q96PD5 576 aa24.69■■□□□ 1.54
CDK9-201ENST00000373264 KLC2Q9H0B6 622 aa24.69■■□□□ 1.54
CDK9-201ENST00000373264 A0A0G2JND7 137 aa24.69■■□□□ 1.54
CDK9-201ENST00000373264 PIRO00625 290 aa24.69■■□□□ 1.54
CDK9-201ENST00000373264 NDUFV1P49821 464 aa24.69■■□□□ 1.54
CDK9-201ENST00000373264 CCDC15Q0P6D6 951 aa24.69■■□□□ 1.54
CDK9-201ENST00000373264 BST2Q10589 180 aaKnown RBP24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms