RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 MED10Q9BTT4 135 aa12.52□□□□□ -0.41
NCDN-202ENST00000373243 ZNF395Q9H8N7 513 aaPredicted RBP12.52□□□□□ -0.41
NCDN-202ENST00000373243 WASF2Q9Y6W5 498 aa12.52□□□□□ -0.41
NCDN-202ENST00000373243 UBR2Q8IWV8 1755 aa12.52□□□□□ -0.41
NCDN-202ENST00000373243 ZMPSTE24O75844 475 aa12.52□□□□□ -0.41
NCDN-202ENST00000373243 TCF7P36402 384 aaPredicted RBP12.52□□□□□ -0.41
NCDN-202ENST00000373243 TSPY1Q01534 308 aa12.52□□□□□ -0.41
NCDN-202ENST00000373243 NME3Q13232 169 aa12.52□□□□□ -0.41
NCDN-202ENST00000373243 DCTN2Q13561 401 aaKnown RBP12.52□□□□□ -0.41
NCDN-202ENST00000373243 SIX1Q15475 284 aaPredicted RBP12.52□□□□□ -0.41
NCDN-202ENST00000373243 RTKN2Q8IZC4 609 aa12.52□□□□□ -0.41
NCDN-202ENST00000373243 CCNYL1Q8N7R7 359 aa12.52□□□□□ -0.41
NCDN-202ENST00000373243 IFT43Q96FT9 208 aa12.52□□□□□ -0.41
NCDN-202ENST00000373243 ZNF408Q9H9D4 720 aa12.52□□□□□ -0.41
NCDN-202ENST00000373243 MYOZ2Q9NPC6 264 aa12.52□□□□□ -0.41
NCDN-202ENST00000373243 CIDEBQ9UHD4 219 aa12.52□□□□□ -0.41
NCDN-202ENST00000373243 ZNRF3Q9ULT6 936 aa12.52□□□□□ -0.41
NCDN-202ENST00000373243 PDE4DIPQ5VU43 2346 aa12.52□□□□□ -0.41
NCDN-202ENST00000373243 ALOX15BO15296 676 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 DHX15O43143 795 aaKnown RBP12.51□□□□□ -0.41
NCDN-202ENST00000373243 TBX10O75333 385 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 CDK7P50613 346 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 TAP1Q03518 808 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 CXCL9Q07325 125 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 SLC45A4Q5BKX6 768 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 WASHC2DQ5SRD0 308 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 SLC39A4Q6P5W5 647 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 PID1Q7Z2X4 250 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 RNF148Q8N7C7 305 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 C12orf50Q8NA57 414 aaPredicted RBP12.51□□□□□ -0.41
NCDN-202ENST00000373243 MCUQ8NE86 351 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 PGBD4Q96DM1 585 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 OXNAD1Q96HP4 312 aaPredicted RBP12.51□□□□□ -0.41
NCDN-202ENST00000373243 UNKQ9C0B0 810 aaKnown RBP12.51□□□□□ -0.41
NCDN-202ENST00000373243 NMUR2Q9GZQ4 415 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 RSAD1Q9HA92 442 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 MRGBPQ9NV56 204 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 KLHL8Q9P2G9 620 aaPredicted RBP12.51□□□□□ -0.41
NCDN-202ENST00000373243 TCRBV7S3A2A0A539 114 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 TMEM191CA6NGB0 347 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 VWA5AO00534 786 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 USP1O94782 785 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 RBL1P28749 1068 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 HALP42357 657 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 BAG6P46379 1132 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 NAA20P61599 178 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 DPYSL3Q14195 570 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 GLRA4Q5JXX5 417 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 ATF7IP2Q5U623 682 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 VSIG10LQ86VR7 867 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 HACE1Q8IYU2 909 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 ZNF280CQ8ND82 737 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 PPP1R13LQ8WUF5 828 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 PYDC1Q8WXC3 89 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 GPRASP2Q96D09 838 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 WNK4Q96J92 1243 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 SPATA33Q96N06 139 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 XPNPEP1Q9NQW7 623 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 EFR3BQ9Y2G0 817 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 DNAJC16Q9Y2G8 782 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 GOLGA8QA0A0J9YX86 632 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 GOLGA8OA6NCC3 632 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 GOLGA8NF8WBI6 632 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 OGTO15294 1046 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 XPOTO43592 962 aaKnown RBP12.51□□□□□ -0.41
NCDN-202ENST00000373243 MMP8P22894 467 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 KDELR1P24390 212 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 DSG1Q02413 1049 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 MGAT5Q09328 741 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 BST1Q10588 318 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 TTC39BQ5VTQ0 682 aaPredicted RBP12.51□□□□□ -0.41
NCDN-202ENST00000373243 TMEM214Q6NUQ4 689 aaKnown RBP12.51□□□□□ -0.41
NCDN-202ENST00000373243 SLC26A11Q86WA9 606 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 C12orf56Q8IXR9 622 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 PPWD1Q96BP3 646 aaKnown RBP12.51□□□□□ -0.41
NCDN-202ENST00000373243 KIF12Q96FN5 646 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 ACSS2Q9NR19 701 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 EURLQ9NYK6 297 aa12.51□□□□□ -0.41
NCDN-202ENST00000373243 TCRBV9S1A1TA0A576 114 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 MTA2O94776 668 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 GSTT2P0CG29 244 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 GSTT2BP0CG30 244 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 VARSP26640 1264 aaKnown RBP12.5□□□□□ -0.41
NCDN-202ENST00000373243 NAMPTP43490 491 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 NUMBP49757 651 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 TCHHL1Q5QJ38 904 aaPredicted RBP12.5□□□□□ -0.41
NCDN-202ENST00000373243 RBM44Q6ZP01 1051 aaKnown RBP12.5□□□□□ -0.41
NCDN-202ENST00000373243 DENND5BQ6ZUT9 1274 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 ACOT1Q86TX2 421 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 TREML1Q86YW5 311 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 MICALL2Q8IY33 904 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 RNF169Q8NCN4 708 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 USP6NLQ92738 828 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 APOL2Q9BQE5 337 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 SYT11Q9BT88 431 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 LRMDAQ9H2I8 198 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 TUT1Q9H6E5 874 aaKnown RBP12.5□□□□□ -0.41
NCDN-202ENST00000373243 INIPQ9NRY2 104 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 NR2E3Q9Y5X4 410 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 PGK2P07205 417 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms