RNA–Protein interactions for RNA: ENST00000373020.8

TSPAN6-201, Transcript of tetraspanin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN6, Length 2,206 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-201ENST00000373020 HOXA11P31270 313 aaPredicted RBP13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 L1CAMP32004 1257 aa13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 SERPINB4P48594 390 aa13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 SYCP2LQ5T4T6 812 aa13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 FAXCQ5TGI0 409 aa13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 FAM91A1Q658Y4 838 aa13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 ZNF467Q7Z7K2 595 aaPredicted RBP13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 MTDHQ86UE4 582 aaKnown RBP13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 NSMCE1Q8WV22 266 aa13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 QKIQ96PU8 341 aaKnown RBP eCLIP13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 TUT1Q9H6E5 874 aaKnown RBP13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 SMYD2Q9NRG4 433 aa13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 FAM49BQ9NUQ9 324 aa13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 MTMR10Q9NXD2 777 aa13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 HESX1Q9UBX0 185 aa13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 SNX9Q9Y5X1 595 aa13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 PEX11AO75192 247 aa13.02□□□□□ -0.33
TSPAN6-201ENST00000373020 KRT37O76014 449 aa13.02□□□□□ -0.33
TSPAN6-201ENST00000373020 NPTXRO95502 500 aa13.02□□□□□ -0.33
TSPAN6-201ENST00000373020 APOEP02649 317 aa13.02□□□□□ -0.33
TSPAN6-201ENST00000373020 SNRPAP09012 282 aaKnown RBP13.02□□□□□ -0.33
TSPAN6-201ENST00000373020 DLDP09622 509 aaKnown RBP13.02□□□□□ -0.33
TSPAN6-201ENST00000373020 DESP17661 470 aa13.02□□□□□ -0.33
TSPAN6-201ENST00000373020 TFE3P19532 575 aaPredicted RBP13.02□□□□□ -0.33
TSPAN6-201ENST00000373020 ADORA2AP29274 412 aa13.02□□□□□ -0.33
TSPAN6-201ENST00000373020 ADCYAP1R1P41586 468 aa13.02□□□□□ -0.33
TSPAN6-201ENST00000373020 SNX16P57768 344 aa13.02□□□□□ -0.33
TSPAN6-201ENST00000373020 CDK16Q00536 496 aa13.02□□□□□ -0.33
TSPAN6-201ENST00000373020 OVGP1Q12889 678 aa13.02□□□□□ -0.33
TSPAN6-201ENST00000373020 R3HDM1Q15032 1099 aaKnown RBP13.02□□□□□ -0.33
TSPAN6-201ENST00000373020 ZNF449Q6P9G9 518 aa13.02□□□□□ -0.33
TSPAN6-201ENST00000373020 CDHR3Q6ZTQ4 885 aa13.02□□□□□ -0.33
TSPAN6-201ENST00000373020 SCUBE3Q8IX30 993 aa13.02□□□□□ -0.33
TSPAN6-201ENST00000373020 PPM1NQ8N819 430 aa13.02□□□□□ -0.33
TSPAN6-201ENST00000373020 CCDC110Q8TBZ0 833 aa13.02□□□□□ -0.33
TSPAN6-201ENST00000373020 SH3TC2Q8TF17 1288 aa13.02□□□□□ -0.33
TSPAN6-201ENST00000373020 SIGLEC10Q96LC7 697 aa13.02□□□□□ -0.33
TSPAN6-201ENST00000373020 SRPK1Q96SB4 655 aaKnown RBP13.02□□□□□ -0.33
TSPAN6-201ENST00000373020 ADAMTS10Q9H324 1103 aa13.02□□□□□ -0.33
TSPAN6-201ENST00000373020 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.02□□□□□ -0.33
TSPAN6-201ENST00000373020 TUBGCP4Q9UGJ1 667 aa13.02□□□□□ -0.33
TSPAN6-201ENST00000373020 DCTN4Q9UJW0 460 aa13.02□□□□□ -0.33
TSPAN6-201ENST00000373020 FAM159BA6NKW6 160 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 RFPL1O75677 317 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 APRTP07741 180 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 ZFXP17010 805 aaPredicted RBP13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 BGNP21810 368 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 NR2C2P49116 596 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 FAM182AQ5T1J6 154 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 UNC5AQ6ZN44 842 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 N4BP2L2Q92802 583 aaPredicted RBP13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 PTCD3Q96EY7 689 aaKnown RBP13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 B3GNT5Q9BYG0 378 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 RNPEPL1Q9HAU8 725 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 ALG13Q9NP73 1137 aaKnown RBP13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 MTO1Q9Y2Z2 717 aaKnown RBP13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 USP3Q9Y6I4 520 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 COPEO14579 308 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 ECM2O94769 699 aaPredicted RBP13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 HAUS5O94927 633 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 MAP3K6O95382 1288 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 METTL18O95568 372 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 CYP2C8P10632 490 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 GM2AP17900 193 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 EPHB2P29323 1055 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 BCAT1P54687 386 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 MRPS5P82675 430 aaKnown RBP13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 GBE1Q04446 702 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 BST2Q10589 180 aaKnown RBP13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 SLC10A2Q12908 348 aaPredicted RBP13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 SEMA5AQ13591 1074 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 SOWAHAQ2M3V2 549 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 WASHC2DQ5SRD0 308 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 SLC27A1Q6PCB7 646 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 ALKAL1Q6UXT8 129 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 LONP2Q86WA8 852 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 VPS52Q8N1B4 723 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 BEST2Q8NFU1 509 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 TTC17Q96AE7 1141 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 MTBPQ96DY7 904 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 MIPEPQ99797 713 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 TMEM120AQ9BXJ8 343 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 CXorf56Q9H5V9 222 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 SNTG2Q9NY99 539 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 GJD2Q9UKL4 321 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 PLLPQ9Y342 182 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 KAT6AQ92794 2004 aa13.01□□□□□ -0.33
TSPAN6-201ENST00000373020 SNAI1O95863 264 aaPredicted RBP13□□□□□ -0.33
TSPAN6-201ENST00000373020 MMP3P08254 477 aa13□□□□□ -0.33
TSPAN6-201ENST00000373020 CSH1P0DML2 217 aa13□□□□□ -0.33
TSPAN6-201ENST00000373020 CSH2P0DML3 217 aa13□□□□□ -0.33
TSPAN6-201ENST00000373020 IBSPP21815 317 aaPredicted RBP13□□□□□ -0.33
TSPAN6-201ENST00000373020 ARFIP2P53365 341 aa13□□□□□ -0.33
TSPAN6-201ENST00000373020 CCNA1P78396 465 aa13□□□□□ -0.33
TSPAN6-201ENST00000373020 SNAPC2Q13487 334 aa13□□□□□ -0.33
TSPAN6-201ENST00000373020 TTLL12Q14166 644 aaPredicted RBP13□□□□□ -0.33
TSPAN6-201ENST00000373020 PPP6R3Q5H9R7 873 aaPredicted RBP13□□□□□ -0.33
TSPAN6-201ENST00000373020 APBB1IPQ7Z5R6 666 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms