RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 CDK7P50613 346 aa25.99■■□□□ 1.75
CTSA-203ENST00000372459 BNIPLQ7Z465 357 aa25.99■■□□□ 1.75
CTSA-203ENST00000372459 FAM71DQ8N9W8 422 aa25.99■■□□□ 1.75
CTSA-203ENST00000372459 SH3TC2Q8TF17 1288 aa25.99■■□□□ 1.75
CTSA-203ENST00000372459 PGM2Q96G03 612 aa25.99■■□□□ 1.75
CTSA-203ENST00000372459 ROPN1BQ9BZX4 212 aaPredicted RBP25.99■■□□□ 1.75
CTSA-203ENST00000372459 NRDE2Q9H7Z3 1164 aa25.99■■□□□ 1.75
CTSA-203ENST00000372459 ROPN1Q9HAT0 212 aaPredicted RBP25.99■■□□□ 1.75
CTSA-203ENST00000372459 TMEM30AQ9NV96 361 aa25.99■■□□□ 1.75
CTSA-203ENST00000372459 FZD10Q9ULW2 581 aa25.99■■□□□ 1.75
CTSA-203ENST00000372459 PCDHB8Q9UN66 801 aa25.99■■□□□ 1.75
CTSA-203ENST00000372459 HHLA1C9JL84 531 aa25.98■■□□□ 1.75
CTSA-203ENST00000372459 DNM1LO00429 736 aa25.98■■□□□ 1.75
CTSA-203ENST00000372459 RPL22P35268 128 aaKnown RBP25.98■■□□□ 1.75
CTSA-203ENST00000372459 CTCFP49711 727 aaPredicted RBP25.98■■□□□ 1.75
CTSA-203ENST00000372459 RABGGTBP53611 331 aa25.98■■□□□ 1.75
CTSA-203ENST00000372459 TSPY1Q01534 308 aa25.98■■□□□ 1.75
CTSA-203ENST00000372459 DSC1Q08554 894 aa25.98■■□□□ 1.75
CTSA-203ENST00000372459 GPRIN1Q7Z2K8 1008 aa25.98■■□□□ 1.75
CTSA-203ENST00000372459 FAM131BQ86XD5 332 aa25.98■■□□□ 1.75
CTSA-203ENST00000372459 ZNF280BQ86YH2 543 aa25.98■■□□□ 1.75
CTSA-203ENST00000372459 KCTD15Q96SI1 283 aaPredicted RBP25.98■■□□□ 1.75
CTSA-203ENST00000372459 PKMYT1Q99640 499 aa25.98■■□□□ 1.75
CTSA-203ENST00000372459 MTMR10Q9NXD2 777 aa25.98■■□□□ 1.75
CTSA-203ENST00000372459 NINJ2Q9NZG7 142 aa25.98■■□□□ 1.75
CTSA-203ENST00000372459 NRP1O14786 923 aa25.98■■□□□ 1.75
CTSA-203ENST00000372459 CAPN9O14815 690 aa25.98■■□□□ 1.75
CTSA-203ENST00000372459 DDHD2O94830 711 aa25.98■■□□□ 1.75
CTSA-203ENST00000372459 COL6A1P12109 1028 aa25.98■■□□□ 1.75
CTSA-203ENST00000372459 KYNUQ16719 465 aa25.98■■□□□ 1.75
CTSA-203ENST00000372459 OTUD1Q5VV17 481 aaPredicted RBP25.98■■□□□ 1.75
CTSA-203ENST00000372459 HFE2Q6ZVN8 426 aa25.98■■□□□ 1.75
CTSA-203ENST00000372459 PPIL6Q8IXY8 311 aa25.98■■□□□ 1.75
CTSA-203ENST00000372459 FARP1Q9Y4F1 1045 aaPredicted RBP25.98■■□□□ 1.75
CTSA-203ENST00000372459 HEY1Q9Y5J3 304 aa25.98■■□□□ 1.75
CTSA-203ENST00000372459 TLDC2A0PJX2 215 aa25.97■■□□□ 1.75
CTSA-203ENST00000372459 M0QYT0 321 aa25.97■■□□□ 1.75
CTSA-203ENST00000372459 ATP1A2P50993 1020 aa25.97■■□□□ 1.75
CTSA-203ENST00000372459 IRAK1P51617 712 aa25.97■■□□□ 1.75
CTSA-203ENST00000372459 SKIDA1Q1XH10 827 aa25.97■■□□□ 1.75
CTSA-203ENST00000372459 SYPL2Q5VXT5 272 aa25.97■■□□□ 1.75
CTSA-203ENST00000372459 FAM126BQ8IXS8 530 aa25.97■■□□□ 1.75
CTSA-203ENST00000372459 OR10T2Q8NGX3 314 aa25.97■■□□□ 1.75
CTSA-203ENST00000372459 TMEM161AQ9NX61 479 aa25.97■■□□□ 1.75
CTSA-203ENST00000372459 CFAP69A5D8W1 941 aa25.96■■□□□ 1.75
CTSA-203ENST00000372459 YJEFN3A6XGL0 299 aa25.96■■□□□ 1.75
CTSA-203ENST00000372459 E7ENQ6 273 aa25.96■■□□□ 1.75
CTSA-203ENST00000372459 F8W810 466 aa25.96■■□□□ 1.75
CTSA-203ENST00000372459 TMEM189-UBE2V1I3L0A0 370 aa25.96■■□□□ 1.75
CTSA-203ENST00000372459 RASGRF2O14827 1237 aa25.96■■□□□ 1.75
CTSA-203ENST00000372459 ZBED1O96006 694 aa25.96■■□□□ 1.75
CTSA-203ENST00000372459 USP17L7P0C7H9 530 aa25.96■■□□□ 1.75
CTSA-203ENST00000372459 BDNFP23560 247 aa25.96■■□□□ 1.75
CTSA-203ENST00000372459 HPDP32754 393 aaPredicted RBP25.96■■□□□ 1.75
CTSA-203ENST00000372459 YWHAHQ04917 246 aaPredicted RBP25.96■■□□□ 1.75
CTSA-203ENST00000372459 DEUP1Q05D60 604 aa25.96■■□□□ 1.75
CTSA-203ENST00000372459 COLGALT2Q8IYK4 626 aa25.96■■□□□ 1.75
CTSA-203ENST00000372459 PRCCQ92733 491 aaPredicted RBP25.96■■□□□ 1.75
CTSA-203ENST00000372459 TLCD1Q96CP7 247 aa25.96■■□□□ 1.75
CTSA-203ENST00000372459 RHOBTB2Q9BYZ6 727 aa25.96■■□□□ 1.75
CTSA-203ENST00000372459 UNC93B1Q9H1C4 597 aa25.96■■□□□ 1.75
CTSA-203ENST00000372459 DMAP1Q9NPF5 467 aaPredicted RBP25.96■■□□□ 1.75
CTSA-203ENST00000372459 RCOR3Q9P2K3 495 aaPredicted RBP25.96■■□□□ 1.75
CTSA-203ENST00000372459 NAALADL1Q9UQQ1 740 aa25.96■■□□□ 1.75
CTSA-203ENST00000372459 SMAPO00193 183 aa25.96■■□□□ 1.75
CTSA-203ENST00000372459 RGS16O15492 202 aaPredicted RBP25.96■■□□□ 1.75
CTSA-203ENST00000372459 ARL4AP40617 200 aa25.96■■□□□ 1.75
CTSA-203ENST00000372459 MAGEA4P43358 317 aa25.96■■□□□ 1.75
CTSA-203ENST00000372459 MAGOHP61326 146 aaKnown RBP25.96■■□□□ 1.75
CTSA-203ENST00000372459 PITX1P78337 314 aaPredicted RBP25.96■■□□□ 1.75
CTSA-203ENST00000372459 HTRA3P83110 453 aa25.96■■□□□ 1.75
CTSA-203ENST00000372459 RNASELQ05823 741 aaKnown RBP25.96■■□□□ 1.75
CTSA-203ENST00000372459 FAM193BQ96PV7 902 aaPredicted RBP25.96■■□□□ 1.75
CTSA-203ENST00000372459 CSPG4P5Q96PW8 444 aa25.96■■□□□ 1.75
CTSA-203ENST00000372459 SAYSD1Q9NPB0 183 aa25.96■■□□□ 1.75
CTSA-203ENST00000372459 TBC1D13Q9NVG8 400 aa25.96■■□□□ 1.75
CTSA-203ENST00000372459 TMLHEQ9NVH6 421 aa25.96■■□□□ 1.75
CTSA-203ENST00000372459 EIF3HO15372 352 aaKnown RBP eCLIP25.95■■□□□ 1.75
CTSA-203ENST00000372459 B4GALT3O60512 393 aa25.95■■□□□ 1.75
CTSA-203ENST00000372459 LTFP02788 710 aa25.95■■□□□ 1.75
CTSA-203ENST00000372459 FYNP06241 537 aa25.95■■□□□ 1.75
CTSA-203ENST00000372459 SLC20A2Q08357 652 aa25.95■■□□□ 1.75
CTSA-203ENST00000372459 EPS8L3Q8TE67 593 aaKnown RBP25.95■■□□□ 1.75
CTSA-203ENST00000372459 CPT1BQ92523 772 aa25.95■■□□□ 1.75
CTSA-203ENST00000372459 TMEM209Q96SK2 561 aa25.95■■□□□ 1.75
CTSA-203ENST00000372459 STMN4Q9H169 189 aaPredicted RBP25.95■■□□□ 1.75
CTSA-203ENST00000372459 PNPLA8Q9NP80 782 aa25.95■■□□□ 1.75
CTSA-203ENST00000372459 RRN3Q9NYV6 651 aa25.95■■□□□ 1.75
CTSA-203ENST00000372459 RSPH14Q9UHP6 348 aa25.95■■□□□ 1.75
CTSA-203ENST00000372459 SYNJ2BP-COX16A0A087WUM0 186 aa25.95■■□□□ 1.74
CTSA-203ENST00000372459 SMIM23A6NLE4 172 aa25.95■■□□□ 1.74
CTSA-203ENST00000372459 NBNO60934 754 aa25.95■■□□□ 1.74
CTSA-203ENST00000372459 OR1G1P47890 313 aa25.95■■□□□ 1.74
CTSA-203ENST00000372459 NME3Q13232 169 aa25.95■■□□□ 1.74
CTSA-203ENST00000372459 CENPUQ71F23 418 aa25.95■■□□□ 1.74
CTSA-203ENST00000372459 LRRTM3Q86VH5 581 aa25.95■■□□□ 1.74
CTSA-203ENST00000372459 SLC7A14Q8TBB6 771 aa25.95■■□□□ 1.74
CTSA-203ENST00000372459 IRGQQ8WZA9 623 aa25.95■■□□□ 1.74
CTSA-203ENST00000372459 C9orf72Q96LT7 481 aa25.95■■□□□ 1.74
CTSA-203ENST00000372459 TTC25Q96NG3 672 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms