RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 MTO1Q9Y2Z2 717 aaKnown RBP5.63□□□□□ -1.51
ATG4A-204ENST00000372246 MAD1L1Q9Y6D9 718 aa5.63□□□□□ -1.51
ATG4A-204ENST00000372246 STRCQ7RTU9 1775 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 A0A0B4J269 797 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 H3BNX3 289 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 CFLARO15519 480 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 DCXO43602 365 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 CCNE2O96020 404 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 HLA-DOAP06340 250 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 INHBAP08476 426 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 DHRS4L1P0CG22 281 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 CDK4P11802 303 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 IMPDH2P12268 514 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 ACO1P21399 889 aaKnown RBP5.62□□□□□ -1.51
ATG4A-204ENST00000372246 SLC5A2P31639 672 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 ETFBP38117 255 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 CRKP46108 304 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 GPC3P51654 580 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 CDH15P55291 814 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 OSTNP61366 133 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 MRPS22P82650 360 aaKnown RBP5.62□□□□□ -1.51
ATG4A-204ENST00000372246 CYP24A1Q07973 514 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 TCEAL1Q15170 157 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 CDO1Q16878 200 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 BRDTQ58F21 947 aaPredicted RBP5.62□□□□□ -1.51
ATG4A-204ENST00000372246 SH3D19Q5HYK7 790 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 BSPRYQ5W0U4 402 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 UGT2A3Q6UWM9 527 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 TAS1R3Q7RTX0 852 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 TDRPQ86YL5 185 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 SLC9A9Q8IVB4 645 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 NUDCD3Q8IVD9 361 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 ST13P4Q8IZP2 240 aaPredicted RBP5.62□□□□□ -1.51
ATG4A-204ENST00000372246 TNS4Q8IZW8 715 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 NDUFAF2Q8N183 169 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 WDTC1Q8N5D0 677 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.62□□□□□ -1.51
ATG4A-204ENST00000372246 ATP11CQ8NB49 1132 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 TMEM161BQ8NDZ6 487 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 EXD1Q8NHP7 514 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.62□□□□□ -1.51
ATG4A-204ENST00000372246 FEZF2Q8TBJ5 459 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 TFB1MQ8WVM0 346 aaKnown RBP5.62□□□□□ -1.51
ATG4A-204ENST00000372246 RSAD2Q8WXG1 361 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 E2F7Q96AV8 911 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 LENG1Q96BZ8 264 aaPredicted RBP5.62□□□□□ -1.51
ATG4A-204ENST00000372246 APOPT1Q96IL0 206 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 CLMNQ96JQ2 1002 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 FAM81BQ96LP2 452 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 ANKRD27Q96NW4 1050 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 CENPKQ9BS16 269 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 TEKT3Q9BXF9 490 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 SENP6Q9GZR1 1112 aaPredicted RBP5.62□□□□□ -1.51
ATG4A-204ENST00000372246 IQCGQ9H095 443 aaKnown RBP5.62□□□□□ -1.51
ATG4A-204ENST00000372246 VPS11Q9H270 941 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 SEMA6AQ9H2E6 1030 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 TMEM8AQ9HCN3 771 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 CYP26B1Q9NR63 512 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 C1orf112Q9NSG2 853 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 TAGLN3Q9UI15 199 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 CYTH4Q9UIA0 394 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 CCNL1Q9UK58 526 aaPredicted RBP5.62□□□□□ -1.51
ATG4A-204ENST00000372246 ANGPTL2Q9UKU9 493 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 LZTS1Q9Y250 596 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 DNAJC16Q9Y2G8 782 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 HES2Q9Y543 173 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 ASTN2O75129 1339 aaPredicted RBP5.62□□□□□ -1.51
ATG4A-204ENST00000372246 CCDC78A2IDD5 438 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 C3orf70A6NLC5 250 aaPredicted RBP5.62□□□□□ -1.51
ATG4A-204ENST00000372246 TCP10L2B9ZVM9 353 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 NEMP1O14524 444 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 DHX15O43143 795 aaKnown RBP5.62□□□□□ -1.51
ATG4A-204ENST00000372246 ZBTB14O43829 449 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 ADCY3O60266 1144 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 ENTPD3O75355 529 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 CSPG5O95196 566 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 POLR2MP0CAP2 368 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 UQCRBP14927 111 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 RXRBP28702 533 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 STIP1P31948 543 aaKnown RBP5.62□□□□□ -1.51
ATG4A-204ENST00000372246 SOX11P35716 441 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 TCF7P36402 384 aaPredicted RBP5.62□□□□□ -1.51
ATG4A-204ENST00000372246 SERPINB5P36952 375 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 TNFSF9P41273 254 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 RAP1GDS1P52306 607 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 MRPS9P82933 396 aaKnown RBP5.62□□□□□ -1.51
ATG4A-204ENST00000372246 COG7P83436 770 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 HPCAP84074 193 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 MYBPC1Q00872 1141 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 FSTL1Q12841 308 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 SLC10A2Q12908 348 aaPredicted RBP5.62□□□□□ -1.51
ATG4A-204ENST00000372246 TRIM32Q13049 653 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 DYNC1I2Q13409 638 aaKnown RBP5.62□□□□□ -1.51
ATG4A-204ENST00000372246 MORF4L2Q15014 288 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 R3HDM1Q15032 1099 aaKnown RBP5.62□□□□□ -1.51
ATG4A-204ENST00000372246 EFHC1Q5JVL4 640 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 SYDE1Q6ZW31 735 aaPredicted RBP5.62□□□□□ -1.51
ATG4A-204ENST00000372246 STXBP4Q6ZWJ1 553 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 ANO5Q75V66 913 aa5.62□□□□□ -1.51
ATG4A-204ENST00000372246 RFX6Q8HWS3 928 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms