RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 ARHGAP17Q68EM7 881 aa14.69□□□□□ -0.06
LDB3-204ENST00000372066 ALKAL1Q6UXT8 129 aa14.69□□□□□ -0.06
LDB3-204ENST00000372066 HFE2Q6ZVN8 426 aa14.69□□□□□ -0.06
LDB3-204ENST00000372066 MICALCLQ6ZW33 695 aa14.69□□□□□ -0.06
LDB3-204ENST00000372066 ANKS1BQ7Z6G8 1248 aa14.69□□□□□ -0.06
LDB3-204ENST00000372066 RIBC1Q8N443 379 aaPredicted RBP14.69□□□□□ -0.06
LDB3-204ENST00000372066 CMASQ8NFW8 434 aaPredicted RBP14.69□□□□□ -0.06
LDB3-204ENST00000372066 SLC35B2Q8TB61 432 aa14.69□□□□□ -0.06
LDB3-204ENST00000372066 RAPGEF5Q92565 580 aa14.69□□□□□ -0.06
LDB3-204ENST00000372066 CCDC77Q9BR77 488 aa14.69□□□□□ -0.06
LDB3-204ENST00000372066 TRIM6Q9C030 488 aaPredicted RBP14.69□□□□□ -0.06
LDB3-204ENST00000372066 SNTG2Q9NY99 539 aa14.69□□□□□ -0.06
LDB3-204ENST00000372066 HESX1Q9UBX0 185 aa14.69□□□□□ -0.06
LDB3-204ENST00000372066 GGA2Q9UJY4 613 aa14.69□□□□□ -0.06
LDB3-204ENST00000372066 TSPAN16Q9UKR8 245 aa14.69□□□□□ -0.06
LDB3-204ENST00000372066 DNPEPQ9ULA0 475 aa14.69□□□□□ -0.06
LDB3-204ENST00000372066 SHOC2Q9UQ13 582 aa14.69□□□□□ -0.06
LDB3-204ENST00000372066 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.69□□□□□ -0.06
LDB3-204ENST00000372066 C9IYK1 514 aa14.68□□□□□ -0.06
LDB3-204ENST00000372066 FAM107AO95990 144 aa14.68□□□□□ -0.06
LDB3-204ENST00000372066 CYP3A5P20815 502 aa14.68□□□□□ -0.06
LDB3-204ENST00000372066 KDELR1P24390 212 aa14.68□□□□□ -0.06
LDB3-204ENST00000372066 MMP13P45452 471 aa14.68□□□□□ -0.06
LDB3-204ENST00000372066 UBE3AQ05086 875 aa14.68□□□□□ -0.06
LDB3-204ENST00000372066 XKR4Q5GH76 650 aa14.68□□□□□ -0.06
LDB3-204ENST00000372066 SRLQ86TD4 932 aa14.68□□□□□ -0.06
LDB3-204ENST00000372066 SMRP1Q8NCR6 262 aa14.68□□□□□ -0.06
LDB3-204ENST00000372066 OSMRQ99650 979 aa14.68□□□□□ -0.06
LDB3-204ENST00000372066 RSAD1Q9HA92 442 aa14.68□□□□□ -0.06
LDB3-204ENST00000372066 PPCSQ9HAB8 311 aa14.68□□□□□ -0.06
LDB3-204ENST00000372066 KLHL11Q9NVR0 708 aa14.68□□□□□ -0.06
LDB3-204ENST00000372066 RSPH14Q9UHP6 348 aa14.68□□□□□ -0.06
LDB3-204ENST00000372066 TRAPPC3O43617 180 aa14.68□□□□□ -0.06
LDB3-204ENST00000372066 FGF18O76093 207 aa14.68□□□□□ -0.06
LDB3-204ENST00000372066 FAM163BP0C2L3 166 aa14.68□□□□□ -0.06
LDB3-204ENST00000372066 KCNE1P15382 129 aa14.68□□□□□ -0.06
LDB3-204ENST00000372066 STAT4Q14765 748 aa14.68□□□□□ -0.06
LDB3-204ENST00000372066 TRIP13Q15645 432 aaPredicted RBP14.68□□□□□ -0.06
LDB3-204ENST00000372066 GOLGA7BQ2TAP0 167 aa14.68□□□□□ -0.06
LDB3-204ENST00000372066 P3H1Q32P28 736 aa14.68□□□□□ -0.06
LDB3-204ENST00000372066 PKDCCQ504Y2 493 aa14.68□□□□□ -0.06
LDB3-204ENST00000372066 TXNRD3NBQ6F5E7 133 aa14.68□□□□□ -0.06
LDB3-204ENST00000372066 FAM228AQ86W67 206 aa14.68□□□□□ -0.06
LDB3-204ENST00000372066 EDAQ92838 391 aa14.68□□□□□ -0.06
LDB3-204ENST00000372066 TLR9Q9NR96 1032 aa14.68□□□□□ -0.06
LDB3-204ENST00000372066 GDAP2Q9NXN4 497 aa14.68□□□□□ -0.06
LDB3-204ENST00000372066 TJP2Q9UDY2 1190 aa14.68□□□□□ -0.06
LDB3-204ENST00000372066 TPX2Q9ULW0 747 aaKnown RBP14.68□□□□□ -0.06
LDB3-204ENST00000372066 USP18Q9UMW8 372 aa14.68□□□□□ -0.06
LDB3-204ENST00000372066 MUC6Q6W4X9 2439 aa14.68□□□□□ -0.06
LDB3-204ENST00000372066 NLRC5Q86WI3 1866 aa14.67□□□□□ -0.06
LDB3-204ENST00000372066 TLDC2A0PJX2 215 aa14.67□□□□□ -0.06
LDB3-204ENST00000372066 GMNCA6NCL1 334 aa14.67□□□□□ -0.06
LDB3-204ENST00000372066 C2CD4BA6NLJ0 364 aa14.67□□□□□ -0.06
LDB3-204ENST00000372066 ZNF487B1APH4 448 aa14.67□□□□□ -0.06
LDB3-204ENST00000372066 APOC4-APOC2K7ER74 178 aa14.67□□□□□ -0.06
LDB3-204ENST00000372066 RECQL4O94761 1208 aa14.67□□□□□ -0.06
LDB3-204ENST00000372066 ENDOD1O94919 500 aa14.67□□□□□ -0.06
LDB3-204ENST00000372066 GLP2RO95838 553 aa14.67□□□□□ -0.06
LDB3-204ENST00000372066 TRUB2O95900 331 aaKnown RBP14.67□□□□□ -0.06
LDB3-204ENST00000372066 APOC2P02655 101 aa14.67□□□□□ -0.06
LDB3-204ENST00000372066 FGFR1P11362 822 aa14.67□□□□□ -0.06
LDB3-204ENST00000372066 MIPP30301 263 aa14.67□□□□□ -0.06
LDB3-204ENST00000372066 CHKAP35790 457 aa14.67□□□□□ -0.06
LDB3-204ENST00000372066 CCT5P48643 541 aa14.67□□□□□ -0.06
LDB3-204ENST00000372066 ERVFC1P60507 584 aa14.67□□□□□ -0.06
LDB3-204ENST00000372066 FAM189BP81408 668 aa14.67□□□□□ -0.06
LDB3-204ENST00000372066 ORC1Q13415 861 aa14.67□□□□□ -0.06
LDB3-204ENST00000372066 AUHQ13825 339 aaKnown RBP14.67□□□□□ -0.06
LDB3-204ENST00000372066 TFDP2Q14188 446 aa14.67□□□□□ -0.06
LDB3-204ENST00000372066 C9orf57Q5W0N0 161 aa14.67□□□□□ -0.06
LDB3-204ENST00000372066 ARCQ7LC44 396 aa14.67□□□□□ -0.06
LDB3-204ENST00000372066 NLRP14Q86W24 1093 aa14.67□□□□□ -0.06
LDB3-204ENST00000372066 ARFGAP1Q8N6T3 406 aa14.67□□□□□ -0.06
LDB3-204ENST00000372066 COLGALT1Q8NBJ5 622 aa14.67□□□□□ -0.06
LDB3-204ENST00000372066 KCTD6Q8NC69 237 aa14.67□□□□□ -0.06
LDB3-204ENST00000372066 MYCBPAPQ8TBZ2 947 aa14.67□□□□□ -0.06
LDB3-204ENST00000372066 TEKT4Q8WW24 435 aa14.67□□□□□ -0.06
LDB3-204ENST00000372066 CFAP57Q96MR6 1250 aa14.67□□□□□ -0.06
LDB3-204ENST00000372066 TBCBQ99426 244 aa14.67□□□□□ -0.06
LDB3-204ENST00000372066 SLC4A5Q9BY07 1137 aa14.67□□□□□ -0.06
LDB3-204ENST00000372066 EIF2AQ9BY44 585 aaKnown RBP14.67□□□□□ -0.06
LDB3-204ENST00000372066 KCNH6Q9H252 994 aa14.67□□□□□ -0.06
LDB3-204ENST00000372066 ZWILCHQ9H900 591 aa14.67□□□□□ -0.06
LDB3-204ENST00000372066 TMEM161AQ9NX61 479 aa14.67□□□□□ -0.06
LDB3-204ENST00000372066 NINJ2Q9NZG7 142 aa14.67□□□□□ -0.06
LDB3-204ENST00000372066 HCSTQ9UBK5 93 aa14.67□□□□□ -0.06
LDB3-204ENST00000372066 USP15Q9Y4E8 981 aaPredicted RBP14.67□□□□□ -0.06
LDB3-204ENST00000372066 SNX9Q9Y5X1 595 aa14.67□□□□□ -0.06
LDB3-204ENST00000372066 IL1R2P27930 398 aa14.66□□□□□ -0.06
LDB3-204ENST00000372066 VPS41P49754 854 aa14.66□□□□□ -0.06
LDB3-204ENST00000372066 ARSEP51690 589 aa14.66□□□□□ -0.06
LDB3-204ENST00000372066 PDK2Q15119 407 aa14.66□□□□□ -0.06
LDB3-204ENST00000372066 SV2CQ496J9 727 aa14.66□□□□□ -0.06
LDB3-204ENST00000372066 TTC19Q6DKK2 380 aaPredicted RBP14.66□□□□□ -0.06
LDB3-204ENST00000372066 OR6B2Q6IFH4 312 aa14.66□□□□□ -0.06
LDB3-204ENST00000372066 PDE12Q6L8Q7 609 aaKnown RBP14.66□□□□□ -0.06
LDB3-204ENST00000372066 FAM183BPQ6ZVS7 135 aa14.66□□□□□ -0.06
LDB3-204ENST00000372066 TMEM110Q86TL2 294 aa14.66□□□□□ -0.06
LDB3-204ENST00000372066 MAP7D3Q8IWC1 876 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms