RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 BEX3Q00994 111 aa21.38■■□□□ 1.01
VEGFA-204ENST00000372064 CCL14Q16627 93 aa21.38■■□□□ 1.01
VEGFA-204ENST00000372064 SLC44A1Q8WWI5 657 aa21.38■■□□□ 1.01
VEGFA-204ENST00000372064 SLCO1B3Q9NPD5 702 aa21.38■■□□□ 1.01
VEGFA-204ENST00000372064 C1QAP02745 245 aa21.38■■□□□ 1.01
VEGFA-204ENST00000372064 CYP2F1P24903 491 aa21.38■■□□□ 1.01
VEGFA-204ENST00000372064 YWHAZP63104 245 aaKnown RBP21.38■■□□□ 1.01
VEGFA-204ENST00000372064 IRF5Q13568 498 aa21.38■■□□□ 1.01
VEGFA-204ENST00000372064 SNCBQ16143 134 aa21.38■■□□□ 1.01
VEGFA-204ENST00000372064 ETNK2Q9NVF9 386 aa21.38■■□□□ 1.01
VEGFA-204ENST00000372064 TRIP12Q14669 1992 aaPredicted RBP21.37■■□□□ 1.01
VEGFA-204ENST00000372064 MYL3P08590 195 aa21.37■■□□□ 1.01
VEGFA-204ENST00000372064 KCNE1P15382 129 aa21.37■■□□□ 1.01
VEGFA-204ENST00000372064 C4orf22Q6V702 233 aa21.37■■□□□ 1.01
VEGFA-204ENST00000372064 ZNF276Q8N554 614 aa21.37■■□□□ 1.01
VEGFA-204ENST00000372064 HAS3O00219 553 aa21.37■■□□□ 1.01
VEGFA-204ENST00000372064 AVILO75366 819 aa21.37■■□□□ 1.01
VEGFA-204ENST00000372064 MNAT1P51948 309 aa21.37■■□□□ 1.01
VEGFA-204ENST00000372064 SWT1Q5T5J6 900 aaKnown RBP21.37■■□□□ 1.01
VEGFA-204ENST00000372064 FAXCQ5TGI0 409 aa21.37■■□□□ 1.01
VEGFA-204ENST00000372064 SLC2A14Q8TDB8 520 aa21.37■■□□□ 1.01
VEGFA-204ENST00000372064 ZNF75CPQ92670 426 aaPredicted RBP21.37■■□□□ 1.01
VEGFA-204ENST00000372064 ZNF560Q96MR9 790 aa21.37■■□□□ 1.01
VEGFA-204ENST00000372064 KLC2Q9H0B6 622 aa21.37■■□□□ 1.01
VEGFA-204ENST00000372064 SNX25Q9H3E2 840 aa21.37■■□□□ 1.01
VEGFA-204ENST00000372064 MTMR10Q9NXD2 777 aa21.37■■□□□ 1.01
VEGFA-204ENST00000372064 IQANK1A0A1B0GTG1 560 aa21.36■■□□□ 1.01
VEGFA-204ENST00000372064 DCAF8L1A6NGE4 600 aa21.36■■□□□ 1.01
VEGFA-204ENST00000372064 CAPN15O75808 1086 aa21.36■■□□□ 1.01
VEGFA-204ENST00000372064 TOMM70O94826 608 aa21.36■■□□□ 1.01
VEGFA-204ENST00000372064 PNPLA4P41247 253 aa21.36■■□□□ 1.01
VEGFA-204ENST00000372064 SKIV2L2P42285 1042 aaKnown RBP21.36■■□□□ 1.01
VEGFA-204ENST00000372064 KBTBD12Q3ZCT8 623 aa21.36■■□□□ 1.01
VEGFA-204ENST00000372064 CDKL3Q8IVW4 592 aaPredicted RBP21.36■■□□□ 1.01
VEGFA-204ENST00000372064 ARRDC4Q8NCT1 418 aa21.36■■□□□ 1.01
VEGFA-204ENST00000372064 ACADSBP45954 432 aa21.36■■□□□ 1.01
VEGFA-204ENST00000372064 SH2D5Q6ZV89 423 aa21.36■■□□□ 1.01
VEGFA-204ENST00000372064 CAND1Q86VP6 1230 aaKnown RBP21.36■■□□□ 1.01
VEGFA-204ENST00000372064 FAM228AQ86W67 206 aa21.36■■□□□ 1.01
VEGFA-204ENST00000372064 MAGEC3Q8TD91 643 aa21.36■■□□□ 1.01
VEGFA-204ENST00000372064 TCP10LQ8TDR4 215 aa21.36■■□□□ 1.01
VEGFA-204ENST00000372064 DHX35Q9H5Z1 703 aaKnown RBP21.36■■□□□ 1.01
VEGFA-204ENST00000372064 CHUKO15111 745 aa21.35■■□□□ 1.01
VEGFA-204ENST00000372064 CCNB1P14635 433 aa21.35■■□□□ 1.01
VEGFA-204ENST00000372064 ZFXP17010 805 aaPredicted RBP21.35■■□□□ 1.01
VEGFA-204ENST00000372064 ADRA1DP25100 572 aa21.35■■□□□ 1.01
VEGFA-204ENST00000372064 TAF6P49848 677 aa21.35■■□□□ 1.01
VEGFA-204ENST00000372064 PTK7Q13308 1070 aa21.35■■□□□ 1.01
VEGFA-204ENST00000372064 ASRGL1Q7L266 308 aa21.35■■□□□ 1.01
VEGFA-204ENST00000372064 MCUQ8NE86 351 aa21.35■■□□□ 1.01
VEGFA-204ENST00000372064 APPL2Q8NEU8 664 aa21.35■■□□□ 1.01
VEGFA-204ENST00000372064 HSFY1Q96LI6 401 aa21.35■■□□□ 1.01
VEGFA-204ENST00000372064 POPDC2Q9HBU9 364 aa21.35■■□□□ 1.01
VEGFA-204ENST00000372064 USH1CQ9Y6N9 552 aa21.35■■□□□ 1.01
VEGFA-204ENST00000372064 GCATO75600 419 aa21.35■■□□□ 1.01
VEGFA-204ENST00000372064 ALADP13716 330 aa21.35■■□□□ 1.01
VEGFA-204ENST00000372064 NQO1P15559 274 aaKnown RBP21.35■■□□□ 1.01
VEGFA-204ENST00000372064 TKTP29401 623 aaKnown RBP21.35■■□□□ 1.01
VEGFA-204ENST00000372064 NR2C2P49116 596 aa21.35■■□□□ 1.01
VEGFA-204ENST00000372064 YWHAGP61981 247 aaKnown RBP eCLIP21.35■■□□□ 1.01
VEGFA-204ENST00000372064 SLC45A4Q5BKX6 768 aa21.35■■□□□ 1.01
VEGFA-204ENST00000372064 TBC1D1Q86TI0 1168 aaPredicted RBP21.35■■□□□ 1.01
VEGFA-204ENST00000372064 TTLL3Q9Y4R7 772 aa21.35■■□□□ 1.01
VEGFA-204ENST00000372064 IPPQ9Y573 584 aa21.35■■□□□ 1.01
VEGFA-204ENST00000372064 MAGEA3P43357 314 aa21.35■■□□□ 1.01
VEGFA-204ENST00000372064 SLC10A2Q12908 348 aaPredicted RBP21.35■■□□□ 1.01
VEGFA-204ENST00000372064 VPS11Q9H270 941 aa21.35■■□□□ 1.01
VEGFA-204ENST00000372064 PLAC1Q9HBJ0 212 aa21.35■■□□□ 1.01
VEGFA-204ENST00000372064 ETNK1Q9HBU6 452 aa21.35■■□□□ 1.01
VEGFA-204ENST00000372064 AP4E1Q9UPM8 1137 aa21.35■■□□□ 1.01
VEGFA-204ENST00000372064 XPOTO43592 962 aaKnown RBP21.34■■□□□ 1.01
VEGFA-204ENST00000372064 FAM155BO75949 473 aa21.34■■□□□ 1.01
VEGFA-204ENST00000372064 GBE1Q04446 702 aa21.34■■□□□ 1.01
VEGFA-204ENST00000372064 SLC18A2Q05940 514 aa21.34■■□□□ 1.01
VEGFA-204ENST00000372064 OSTM1Q86WC4 334 aa21.34■■□□□ 1.01
VEGFA-204ENST00000372064 SMG8Q8ND04 991 aaKnown RBP21.34■■□□□ 1.01
VEGFA-204ENST00000372064 CCDC110Q8TBZ0 833 aa21.34■■□□□ 1.01
VEGFA-204ENST00000372064 KCTD15Q96SI1 283 aaPredicted RBP21.34■■□□□ 1.01
VEGFA-204ENST00000372064 ARHGEF3Q9NR81 526 aa21.34■■□□□ 1.01
VEGFA-204ENST00000372064 MT-ND3P03897 115 aa21.34■■□□□ 1.01
VEGFA-204ENST00000372064 CYP2B6P20813 491 aa21.34■■□□□ 1.01
VEGFA-204ENST00000372064 NEK3P51956 506 aa21.34■■□□□ 1.01
VEGFA-204ENST00000372064 KCNJ2P63252 427 aa21.34■■□□□ 1.01
VEGFA-204ENST00000372064 RIPK1Q13546 671 aa21.34■■□□□ 1.01
VEGFA-204ENST00000372064 STRADAQ7RTN6 431 aa21.34■■□□□ 1.01
VEGFA-204ENST00000372064 OTOAQ7RTW8 1153 aa21.34■■□□□ 1.01
VEGFA-204ENST00000372064 ADGRF2Q8IZF7 708 aa21.34■■□□□ 1.01
VEGFA-204ENST00000372064 CCDC33Q8N5R6 958 aa21.34■■□□□ 1.01
VEGFA-204ENST00000372064 C10orf82Q8WW14 230 aa21.34■■□□□ 1.01
VEGFA-204ENST00000372064 NDRG1Q92597 394 aaKnown RBP21.34■■□□□ 1.01
VEGFA-204ENST00000372064 LRRC39Q96DD0 335 aa21.34■■□□□ 1.01
VEGFA-204ENST00000372064 QKIQ96PU8 341 aaKnown RBP eCLIP21.34■■□□□ 1.01
VEGFA-204ENST00000372064 CSPG4P5Q96PW8 444 aa21.34■■□□□ 1.01
VEGFA-204ENST00000372064 USP3Q9Y6I4 520 aa21.34■■□□□ 1.01
VEGFA-204ENST00000372064 INHBAP08476 426 aa21.33■■□□□ 1.01
VEGFA-204ENST00000372064 PRPF39Q86UA1 669 aaKnown RBP21.33■■□□□ 1.01
VEGFA-204ENST00000372064 CCDC185Q8N715 623 aa21.33■■□□□ 1.01
VEGFA-204ENST00000372064 SERAC1Q96JX3 654 aa21.33■■□□□ 1.01
VEGFA-204ENST00000372064 KLF6Q99612 283 aaPredicted RBP21.33■■□□□ 1.01
VEGFA-204ENST00000372064 CD248Q9HCU0 757 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms