RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 AP4E1Q9UPM8 1137 aa30.05■■■□□ 2.4
SSBP3-204ENST00000371320 APRTP07741 180 aa30.04■■■□□ 2.4
SSBP3-204ENST00000371320 ZFXP17010 805 aaPredicted RBP30.04■■■□□ 2.4
SSBP3-204ENST00000371320 ADRA1DP25100 572 aa30.04■■■□□ 2.4
SSBP3-204ENST00000371320 ACADSBP45954 432 aa30.04■■■□□ 2.4
SSBP3-204ENST00000371320 RPL34P49207 117 aaKnown RBP30.04■■■□□ 2.4
SSBP3-204ENST00000371320 TLK2Q86UE8 772 aa30.04■■■□□ 2.4
SSBP3-204ENST00000371320 AGGF1Q8N302 714 aaeCLIP30.04■■■□□ 2.42e-6■□□□□ 9.7
SSBP3-204ENST00000371320 CCDC110Q8TBZ0 833 aa30.04■■■□□ 2.4
SSBP3-204ENST00000371320 SLC2A14Q8TDB8 520 aa30.04■■■□□ 2.4
SSBP3-204ENST00000371320 DCAF8L1A6NGE4 600 aa30.03■■■□□ 2.4
SSBP3-204ENST00000371320 TAF6P49848 677 aa30.03■■■□□ 2.4
SSBP3-204ENST00000371320 SPRYD7Q5W111 196 aa30.03■■■□□ 2.4
SSBP3-204ENST00000371320 ETNK1Q9HBU6 452 aa30.03■■■□□ 2.4
SSBP3-204ENST00000371320 CHUKO15111 745 aa30.03■■■□□ 2.4
SSBP3-204ENST00000371320 KCNE1P15382 129 aa30.03■■■□□ 2.4
SSBP3-204ENST00000371320 MAGEA6P43360 314 aa30.03■■■□□ 2.4
SSBP3-204ENST00000371320 GBE1Q04446 702 aa30.03■■■□□ 2.4
SSBP3-204ENST00000371320 C4orf22Q6V702 233 aa30.03■■■□□ 2.4
SSBP3-204ENST00000371320 LENG1Q96BZ8 264 aaPredicted RBP30.03■■■□□ 2.4
SSBP3-204ENST00000371320 GOLGA2P5Q9HBQ8 144 aa30.03■■■□□ 2.4
SSBP3-204ENST00000371320 PNPLA8Q9NP80 782 aa30.03■■■□□ 2.4
SSBP3-204ENST00000371320 USH1CQ9Y6N9 552 aa30.03■■■□□ 2.4
SSBP3-204ENST00000371320 SCN4AP35499 1836 aa30.02■■■□□ 2.4
SSBP3-204ENST00000371320 NQO1P15559 274 aaKnown RBP30.02■■■□□ 2.4
SSBP3-204ENST00000371320 FAAP100Q0VG06 881 aa30.02■■■□□ 2.4
SSBP3-204ENST00000371320 CAND1Q86VP6 1230 aaKnown RBP30.02■■■□□ 2.4
SSBP3-204ENST00000371320 HSFY1Q96LI6 401 aa30.02■■■□□ 2.4
SSBP3-204ENST00000371320 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP30.02■■■□□ 2.42e-6■■■□□ 14.9
SSBP3-204ENST00000371320 ZC3H7BQ9UGR2 993 aaKnown RBP30.02■■■□□ 2.4
SSBP3-204ENST00000371320 TREHO43280 583 aa30.02■■■□□ 2.4
SSBP3-204ENST00000371320 NR2C2P49116 596 aa30.02■■■□□ 2.4
SSBP3-204ENST00000371320 PSEN2P49810 448 aa30.02■■■□□ 2.4
SSBP3-204ENST00000371320 ADAM17P78536 824 aa30.02■■■□□ 2.4
SSBP3-204ENST00000371320 SETDB1Q15047 1291 aa30.02■■■□□ 2.4
SSBP3-204ENST00000371320 SV2CQ496J9 727 aa30.02■■■□□ 2.4
SSBP3-204ENST00000371320 SLC45A4Q5BKX6 768 aa30.02■■■□□ 2.4
SSBP3-204ENST00000371320 XKR4Q5GH76 650 aa30.02■■■□□ 2.4
SSBP3-204ENST00000371320 UBXN11Q5T124 520 aa30.02■■■□□ 2.4
SSBP3-204ENST00000371320 OLFML2BQ68BL8 750 aa30.02■■■□□ 2.4
SSBP3-204ENST00000371320 KLHL29Q96CT2 875 aa30.02■■■□□ 2.4
SSBP3-204ENST00000371320 KCTD15Q96SI1 283 aaPredicted RBP30.02■■■□□ 2.4
SSBP3-204ENST00000371320 TSPAN18Q96SJ8 248 aa30.02■■■□□ 2.4
SSBP3-204ENST00000371320 MAGEB5Q9BZ81 275 aa30.02■■■□□ 2.4
SSBP3-204ENST00000371320 CD248Q9HCU0 757 aa30.02■■■□□ 2.4
SSBP3-204ENST00000371320 MTMR10Q9NXD2 777 aa30.02■■■□□ 2.4
SSBP3-204ENST00000371320 WDR91A4D1P6 747 aa30.01■■■□□ 2.39
SSBP3-204ENST00000371320 HUS1O60921 280 aa30.01■■■□□ 2.39
SSBP3-204ENST00000371320 FKBP1BP68106 108 aa30.01■■■□□ 2.39
SSBP3-204ENST00000371320 SLC10A2Q12908 348 aaPredicted RBP30.01■■■□□ 2.39
SSBP3-204ENST00000371320 CSPG4P5Q96PW8 444 aa30.01■■■□□ 2.39
SSBP3-204ENST00000371320 SLC17A7Q9P2U7 560 aa30.01■■■□□ 2.39
SSBP3-204ENST00000371320 KCNJ2P63252 427 aa30■■■□□ 2.39
SSBP3-204ENST00000371320 SOX4Q06945 474 aaPredicted RBP30■■■□□ 2.39
SSBP3-204ENST00000371320 PRPF39Q86UA1 669 aaKnown RBP30■■■□□ 2.39
SSBP3-204ENST00000371320 ADGRF2Q8IZF7 708 aa30■■■□□ 2.39
SSBP3-204ENST00000371320 VPS52Q8N1B4 723 aa30■■■□□ 2.39
SSBP3-204ENST00000371320 CCDC185Q8N715 623 aa30■■■□□ 2.39
SSBP3-204ENST00000371320 ANKLE1Q8NAG6 615 aa30■■■□□ 2.39
SSBP3-204ENST00000371320 TNIP3Q96KP6 325 aa30■■■□□ 2.39
SSBP3-204ENST00000371320 POPDC2Q9HBU9 364 aa30■■■□□ 2.39
SSBP3-204ENST00000371320 TTLL3Q9Y4R7 772 aa30■■■□□ 2.39
SSBP3-204ENST00000371320 IGF2BP3O00425 579 aaKnown RBP eCLIP30■■■□□ 2.39
SSBP3-204ENST00000371320 LPXNO60711 386 aa30■■■□□ 2.39
SSBP3-204ENST00000371320 GCATO75600 419 aa30■■■□□ 2.39
SSBP3-204ENST00000371320 TOMM70O94826 608 aa30■■■□□ 2.39
SSBP3-204ENST00000371320 ALADP13716 330 aa30■■■□□ 2.39
SSBP3-204ENST00000371320 ALDH3A1P30838 453 aa30■■■□□ 2.39
SSBP3-204ENST00000371320 EFHC1Q5JVL4 640 aa30■■■□□ 2.39
SSBP3-204ENST00000371320 OTOAQ7RTW8 1153 aa30■■■□□ 2.39
SSBP3-204ENST00000371320 MCUQ8NE86 351 aa30■■■□□ 2.39
SSBP3-204ENST00000371320 SERAC1Q96JX3 654 aa30■■■□□ 2.39
SSBP3-204ENST00000371320 VPS11Q9H270 941 aa30■■■□□ 2.39
SSBP3-204ENST00000371320 C12orf65Q9H3J6 166 aaKnown RBP30■■■□□ 2.39
SSBP3-204ENST00000371320 CPA4Q9UI42 421 aa30■■■□□ 2.39
SSBP3-204ENST00000371320 STRADAQ7RTN6 431 aa29.99■■■□□ 2.39
SSBP3-204ENST00000371320 LIMS2Q7Z4I7 341 aa29.99■■■□□ 2.39
SSBP3-204ENST00000371320 SLC26A11Q86WA9 606 aa29.99■■■□□ 2.39
SSBP3-204ENST00000371320 MYL3P08590 195 aa29.99■■■□□ 2.39
SSBP3-204ENST00000371320 MAP2K5Q13163 448 aa29.99■■■□□ 2.39
SSBP3-204ENST00000371320 MORN1Q5T089 497 aa29.99■■■□□ 2.39
SSBP3-204ENST00000371320 KCNT2Q6UVM3 1135 aa29.99■■■□□ 2.39
SSBP3-204ENST00000371320 CTAGE3PQ8IX95 158 aa29.99■■■□□ 2.39
SSBP3-204ENST00000371320 IPPQ9Y573 584 aa29.99■■■□□ 2.39
SSBP3-204ENST00000371320 METTL18O95568 372 aa29.98■■■□□ 2.39
SSBP3-204ENST00000371320 TKTP29401 623 aaKnown RBP29.98■■■□□ 2.39
SSBP3-204ENST00000371320 SKIV2L2P42285 1042 aaKnown RBP29.98■■■□□ 2.39
SSBP3-204ENST00000371320 FAM228AQ86W67 206 aa29.98■■■□□ 2.39
SSBP3-204ENST00000371320 ZNF276Q8N554 614 aa29.98■■■□□ 2.39
SSBP3-204ENST00000371320 CCDC33Q8N5R6 958 aa29.98■■■□□ 2.39
SSBP3-204ENST00000371320 PPM1NQ8N819 430 aa29.98■■■□□ 2.39
SSBP3-204ENST00000371320 LRRC39Q96DD0 335 aa29.98■■■□□ 2.39
SSBP3-204ENST00000371320 QKIQ96PU8 341 aaKnown RBP eCLIP29.98■■■□□ 2.39
SSBP3-204ENST00000371320 LRRC37BQ96QE4 947 aa29.98■■■□□ 2.39
SSBP3-204ENST00000371320 MYLK2Q9H1R3 596 aa29.98■■■□□ 2.39
SSBP3-204ENST00000371320 FLRT1Q9NZU1 646 aa29.98■■■□□ 2.39
SSBP3-204ENST00000371320 GTF2IRD1Q9UHL9 959 aa29.98■■■□□ 2.39
SSBP3-204ENST00000371320 HAS3O00219 553 aa29.97■■■□□ 2.39
SSBP3-204ENST00000371320 TRDMT1O14717 391 aaKnown RBP29.97■■■□□ 2.39
SSBP3-204ENST00000371320 XPO1O14980 1071 aaKnown RBP29.97■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms