RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 FAM234BA2RU67 622 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 TSPY2A6NKD2 308 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 SPATA31C2B4DYI2 1134 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 POLR3GO15318 223 aaPredicted RBP4.13□□□□□ -1.75
MCF2-203ENST00000370576 MAGEB3O15480 346 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 PHF2O75151 1096 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 CKMP06732 381 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 OR52Z1P0C646 297 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 CDK4P11802 303 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 PABPC1P11940 636 aaKnown RBP4.13□□□□□ -1.75
MCF2-203ENST00000370576 BMP3P12645 472 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 DHPSP49366 369 aaPredicted RBP4.13□□□□□ -1.75
MCF2-203ENST00000370576 GMPSP49915 693 aaPredicted RBP4.13□□□□□ -1.75
MCF2-203ENST00000370576 TSPY1Q01534 308 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 LBRQ14739 615 aaKnown RBP4.13□□□□□ -1.75
MCF2-203ENST00000370576 NONOQ15233 471 aaKnown RBP eCLIP4.13□□□□□ -1.75
MCF2-203ENST00000370576 TAF5Q15542 800 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 HFEQ30201 348 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 EDRF1Q3B7T1 1238 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 GPR139Q6DWJ6 353 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 RNF19BQ6ZMZ0 732 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 C15orf39Q6ZRI6 1047 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 C1orf186Q6ZWK4 172 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 ZNF765Q7L2R6 523 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 VSTM4Q8IW00 320 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 LSMEM2Q8N112 164 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 CCDC24Q8N4L8 307 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 NIPA2Q8N8Q9 360 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 ERMNQ8TAM6 284 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 CYP2W1Q8TAV3 490 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 TMEM169Q96HH4 297 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 FAM167AQ96KS9 214 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 CNOT6LQ96LI5 555 aaKnown RBP4.13□□□□□ -1.75
MCF2-203ENST00000370576 GAL3ST1Q99999 423 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 TRIM9Q9C026 710 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 INTS2Q9H0H0 1204 aaKnown RBP4.13□□□□□ -1.75
MCF2-203ENST00000370576 C1orf21Q9H246 121 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 C6orf50Q9HD87 102 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 VPS54Q9P1Q0 977 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 COL20A1Q9P218 1284 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 CACNG4Q9UBN1 327 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 CNTN6Q9UQ52 1028 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 BACE2Q9Y5Z0 518 aa4.13□□□□□ -1.75
MCF2-203ENST00000370576 EMSYQ7Z589 1322 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 ANKRD34BA5PLL1 514 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 ABLIM1O14639 778 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 INPPL1O15357 1258 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 DAPK3O43293 454 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 TBX1O43435 398 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 DNAJA2O60884 412 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 LTA4HP09960 611 aaKnown RBP4.12□□□□□ -1.75
MCF2-203ENST00000370576 POLR2MP0CAP2 368 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 CCDC192P0DO97 292 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 RGS2P41220 211 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 SULT1E1P49888 294 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 ADCY7P51828 1080 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 MRPS9P82933 396 aaKnown RBP4.12□□□□□ -1.75
MCF2-203ENST00000370576 GRSF1Q12849 480 aaKnown RBP eCLIP4.12□□□□□ -1.75
MCF2-203ENST00000370576 ITGA7Q13683 1181 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 TBCCQ15814 346 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 PLA2G4EQ3MJ16 856 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 SLC25A24Q6NUK1 477 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 UNC5AQ6ZN44 842 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 UNC13DQ70J99 1090 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 CDAN1Q8IWY9 1227 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 ADGRG2Q8IZP9 1017 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 ZNF444Q8N0Y2 327 aaPredicted RBP4.12□□□□□ -1.75
MCF2-203ENST00000370576 GUF1Q8N442 669 aaKnown RBP4.12□□□□□ -1.75
MCF2-203ENST00000370576 PDCL2Q8N4E4 241 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 KIAA0895Q8NCT3 520 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 OR56B2PQ8NGI1 322 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 LILRB4Q8NHJ6 448 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 ZNF671Q8TAW3 534 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 EPSTI1Q96J88 318 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 MYL10Q9BUA6 226 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 TDRD3Q9H7E2 651 aaKnown RBP4.12□□□□□ -1.75
MCF2-203ENST00000370576 BMP2KQ9NSY1 1161 aaPredicted RBP4.12□□□□□ -1.75
MCF2-203ENST00000370576 IPO11Q9UI26 975 aaKnown RBP4.12□□□□□ -1.75
MCF2-203ENST00000370576 HACL1Q9UJ83 578 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 A0A1W2PP55 124 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 FAM86B1E9PN63 330 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 CDK2AP1O14519 115 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 SLC16A3O15427 465 aaKnown RBP4.12□□□□□ -1.75
MCF2-203ENST00000370576 CTIFO43310 598 aaKnown RBP4.12□□□□□ -1.75
MCF2-203ENST00000370576 S100A6P06703 90 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 FAM86B2P0C5J1 330 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 PRR35P0CG20 571 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 LAMP2P13473 410 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 HPGDP15428 266 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 CDC25AP30304 524 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 AFF3P51826 1226 aaKnown RBP4.12□□□□□ -1.75
MCF2-203ENST00000370576 JAM2P57087 298 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 ADAM9Q13443 819 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 SMAD2Q15796 467 aaKnown RBP4.12□□□□□ -1.75
MCF2-203ENST00000370576 CTXN3Q4LDR2 81 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 BLOC1S3Q6QNY0 202 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 C6orf89Q6UWU4 347 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 RANBP10Q6VN20 620 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 ARHGAP36Q6ZRI8 547 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 NLRC3Q7RTR2 1065 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms