RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 NT5DC4Q86YG4 428 aa20.25■□□□□ 0.83
LMO4-202ENST00000370544 B4GALNT2Q8NHY0 566 aa20.25■□□□□ 0.83
LMO4-202ENST00000370544 MKL1Q969V6 931 aa20.25■□□□□ 0.83
LMO4-202ENST00000370544 FZD1Q9UP38 647 aa20.25■□□□□ 0.83
LMO4-202ENST00000370544 PTPRAP18433 802 aa20.24■□□□□ 0.83
LMO4-202ENST00000370544 SERPINB10P48595 397 aa20.24■□□□□ 0.83
LMO4-202ENST00000370544 SMARCD1Q96GM5 515 aa20.24■□□□□ 0.83
LMO4-202ENST00000370544 ABHD8Q96I13 439 aa20.24■□□□□ 0.83
LMO4-202ENST00000370544 ZBTB45Q96K62 511 aaPredicted RBP20.24■□□□□ 0.83
LMO4-202ENST00000370544 RRAGCQ9HB90 399 aa20.24■□□□□ 0.83
LMO4-202ENST00000370544 RRN3Q9NYV6 651 aa20.24■□□□□ 0.83
LMO4-202ENST00000370544 UBP1Q9NZI7 540 aa20.24■□□□□ 0.83
LMO4-202ENST00000370544 GLP2RO95838 553 aa20.24■□□□□ 0.83
LMO4-202ENST00000370544 KCNA3P22001 575 aa20.24■□□□□ 0.83
LMO4-202ENST00000370544 KLC1Q07866 573 aa20.24■□□□□ 0.83
LMO4-202ENST00000370544 TBX2Q13207 712 aaPredicted RBP20.24■□□□□ 0.83
LMO4-202ENST00000370544 DEFB128Q7Z7B8 93 aa20.24■□□□□ 0.83
LMO4-202ENST00000370544 ANKZF1Q9H8Y5 726 aa20.24■□□□□ 0.83
LMO4-202ENST00000370544 DDX3XO00571 662 aaKnown RBP eCLIP20.24■□□□□ 0.839e-12■■■■■ 34.6
LMO4-202ENST00000370544 PSEN2P49810 448 aa20.24■□□□□ 0.83
LMO4-202ENST00000370544 RAP1GDS1P52306 607 aa20.24■□□□□ 0.83
LMO4-202ENST00000370544 KCNMA1Q12791 1236 aa20.24■□□□□ 0.83
LMO4-202ENST00000370544 MPP3Q13368 585 aa20.24■□□□□ 0.83
LMO4-202ENST00000370544 LRRC8BQ6P9F7 803 aa20.24■□□□□ 0.83
LMO4-202ENST00000370544 CNDP1Q96KN2 507 aa20.24■□□□□ 0.83
LMO4-202ENST00000370544 ADGRE3Q9BY15 652 aa20.24■□□□□ 0.83
LMO4-202ENST00000370544 CYP4F12Q9HCS2 524 aa20.24■□□□□ 0.83
LMO4-202ENST00000370544 SFMBT1Q9UHJ3 866 aa20.24■□□□□ 0.83
LMO4-202ENST00000370544 TBKBP1A7MCY6 615 aa20.24■□□□□ 0.83
LMO4-202ENST00000370544 CES2O00748 559 aa20.24■□□□□ 0.83
LMO4-202ENST00000370544 TRIM66O15016 1216 aa20.24■□□□□ 0.83
LMO4-202ENST00000370544 ACVR2BQ13705 512 aa20.24■□□□□ 0.83
LMO4-202ENST00000370544 SOCS4Q8WXH5 440 aa20.24■□□□□ 0.83
LMO4-202ENST00000370544 CDCA5Q96FF9 252 aa20.24■□□□□ 0.83
LMO4-202ENST00000370544 HES6Q96HZ4 224 aa20.24■□□□□ 0.83
LMO4-202ENST00000370544 CELF6Q96J87 481 aaKnown RBP20.24■□□□□ 0.83
LMO4-202ENST00000370544 SHOC2Q9UQ13 582 aa20.24■□□□□ 0.83
LMO4-202ENST00000370544 RHBDL3P58872 404 aa20.24■□□□□ 0.83
LMO4-202ENST00000370544 CBWD6Q4V339 395 aa20.24■□□□□ 0.83
LMO4-202ENST00000370544 CBWD3Q5JTY5 395 aa20.24■□□□□ 0.83
LMO4-202ENST00000370544 CBWD5Q5RIA9 395 aa20.24■□□□□ 0.83
LMO4-202ENST00000370544 FBXO44Q9H4M3 255 aa20.24■□□□□ 0.83
LMO4-202ENST00000370544 PCDHA3Q9Y5H8 950 aa20.24■□□□□ 0.83
LMO4-202ENST00000370544 MGAT5Q09328 741 aa20.23■□□□□ 0.83
LMO4-202ENST00000370544 FAM136AQ96C01 138 aa20.23■□□□□ 0.83
LMO4-202ENST00000370544 ATP11BQ9Y2G3 1177 aa20.23■□□□□ 0.83
LMO4-202ENST00000370544 ACOT9Q9Y305 439 aa20.23■□□□□ 0.83
LMO4-202ENST00000370544 RBP1P09455 135 aa20.23■□□□□ 0.83
LMO4-202ENST00000370544 THRAP10827 490 aa20.23■□□□□ 0.83
LMO4-202ENST00000370544 GHRP10912 638 aa20.23■□□□□ 0.83
LMO4-202ENST00000370544 ADCYAP1R1P41586 468 aa20.23■□□□□ 0.83
LMO4-202ENST00000370544 YWHAZP63104 245 aaKnown RBP20.23■□□□□ 0.83
LMO4-202ENST00000370544 SRPK1Q96SB4 655 aaKnown RBP20.23■□□□□ 0.83
LMO4-202ENST00000370544 GPAMQ9HCL2 828 aa20.23■□□□□ 0.83
LMO4-202ENST00000370544 KCNMB3Q9NPA1 279 aa20.23■□□□□ 0.83
LMO4-202ENST00000370544 RBM22Q9NW64 420 aaKnown RBP eCLIP20.23■□□□□ 0.83
LMO4-202ENST00000370544 DNAJC16Q9Y2G8 782 aa20.23■□□□□ 0.83
LMO4-202ENST00000370544 PLOD1Q02809 727 aaPredicted RBP20.23■□□□□ 0.83
LMO4-202ENST00000370544 DDX39BQ13838 428 aaKnown RBP20.23■□□□□ 0.83
LMO4-202ENST00000370544 GALNTL6Q49A17 601 aa20.23■□□□□ 0.83
LMO4-202ENST00000370544 TM9SF1O15321 606 aa20.23■□□□□ 0.83
LMO4-202ENST00000370544 EFCAB14O75071 495 aa20.23■□□□□ 0.83
LMO4-202ENST00000370544 PYGMP11217 842 aa20.23■□□□□ 0.83
LMO4-202ENST00000370544 BMPR2Q13873 1038 aa20.23■□□□□ 0.83
LMO4-202ENST00000370544 ZNF284Q2VY69 593 aa20.23■□□□□ 0.83
LMO4-202ENST00000370544 ITIH5Q86UX2 942 aa20.23■□□□□ 0.83
LMO4-202ENST00000370544 NMRK1Q9NWW6 199 aa20.23■□□□□ 0.83
LMO4-202ENST00000370544 CDH8P55286 799 aa20.22■□□□□ 0.83
LMO4-202ENST00000370544 TBX4P57082 545 aa20.22■□□□□ 0.83
LMO4-202ENST00000370544 GRIK5Q16478 980 aa20.22■□□□□ 0.83
LMO4-202ENST00000370544 FUT11Q495W5 492 aa20.22■□□□□ 0.83
LMO4-202ENST00000370544 SEL1L3Q68CR1 1132 aa20.22■□□□□ 0.83
LMO4-202ENST00000370544 SH3RF1Q7Z6J0 888 aa20.22■□□□□ 0.83
LMO4-202ENST00000370544 OOSP2Q86WS3 158 aa20.22■□□□□ 0.83
LMO4-202ENST00000370544 TRIM48Q8IWZ4 208 aa20.22■□□□□ 0.83
LMO4-202ENST00000370544 PLEKHA8Q96JA3 519 aa20.22■□□□□ 0.83
LMO4-202ENST00000370544 VPS50Q96JG6 964 aa20.22■□□□□ 0.83
LMO4-202ENST00000370544 THUMPD3Q9BV44 507 aaKnown RBP20.22■□□□□ 0.83
LMO4-202ENST00000370544 SYTL2Q9HCH5 934 aa20.22■□□□□ 0.83
LMO4-202ENST00000370544 RIC1Q4ADV7 1423 aa20.22■□□□□ 0.83
LMO4-202ENST00000370544 PRR23AA6NEV1 266 aa20.22■□□□□ 0.83
LMO4-202ENST00000370544 C1orf186Q6ZWK4 172 aa20.22■□□□□ 0.83
LMO4-202ENST00000370544 XPNPEP3Q9NQH7 507 aa20.22■□□□□ 0.83
LMO4-202ENST00000370544 SNCAIPQ9Y6H5 919 aa20.22■□□□□ 0.83
LMO4-202ENST00000370544 WTIPA6NIX2 430 aaPredicted RBP20.22■□□□□ 0.83
LMO4-202ENST00000370544 KCNA4P22459 653 aa20.22■□□□□ 0.83
LMO4-202ENST00000370544 DNAJB2P25686 324 aa20.22■□□□□ 0.83
LMO4-202ENST00000370544 VGLL4Q14135 290 aa20.22■□□□□ 0.83
LMO4-202ENST00000370544 SLC4A9Q96Q91 983 aa20.22■□□□□ 0.83
LMO4-202ENST00000370544 PORCNQ9H237 461 aa20.22■□□□□ 0.83
LMO4-202ENST00000370544 AVENQ9NQS1 362 aaPredicted RBP20.22■□□□□ 0.83
LMO4-202ENST00000370544 MAGEB16A2A368 324 aa20.22■□□□□ 0.83
LMO4-202ENST00000370544 DNALI1O14645 258 aaPredicted RBP20.22■□□□□ 0.83
LMO4-202ENST00000370544 RIPK2O43353 540 aa20.22■□□□□ 0.83
LMO4-202ENST00000370544 MAN1A2O60476 641 aa20.22■□□□□ 0.83
LMO4-202ENST00000370544 LGALS2P05162 132 aa20.22■□□□□ 0.83
LMO4-202ENST00000370544 CSHL1Q14406 222 aa20.22■□□□□ 0.83
LMO4-202ENST00000370544 MARC1Q5VT66 337 aa20.22■□□□□ 0.83
LMO4-202ENST00000370544 SLC2A14Q8TDB8 520 aa20.22■□□□□ 0.83
LMO4-202ENST00000370544 APBB2Q92870 758 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms