RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 PCDHGC3Q9UN70 934 aa11.1□□□□□ -0.63
TPM3-212ENST00000368533 SCINQ9Y6U3 715 aa11.1□□□□□ -0.63
TPM3-212ENST00000368533 MTA2O94776 668 aa11.1□□□□□ -0.63
TPM3-212ENST00000368533 NQO1P15559 274 aaKnown RBP11.1□□□□□ -0.63
TPM3-212ENST00000368533 CST5P28325 142 aaPredicted RBP11.1□□□□□ -0.63
TPM3-212ENST00000368533 PLCB3Q01970 1234 aa11.1□□□□□ -0.63
TPM3-212ENST00000368533 MTM1Q13496 603 aa11.1□□□□□ -0.63
TPM3-212ENST00000368533 TCTN1Q2MV58 587 aa11.1□□□□□ -0.63
TPM3-212ENST00000368533 SV2CQ496J9 727 aa11.1□□□□□ -0.63
TPM3-212ENST00000368533 MFSD7Q6UXD7 560 aa11.1□□□□□ -0.63
TPM3-212ENST00000368533 FAM47EQ6ZV65 393 aa11.1□□□□□ -0.63
TPM3-212ENST00000368533 ARFGAP1Q8N6T3 406 aa11.1□□□□□ -0.63
TPM3-212ENST00000368533 LRRC52Q8N7C0 313 aa11.1□□□□□ -0.63
TPM3-212ENST00000368533 DDX27Q96GQ7 796 aaKnown RBP11.1□□□□□ -0.63
TPM3-212ENST00000368533 ECT2Q9H8V3 914 aa11.1□□□□□ -0.63
TPM3-212ENST00000368533 VRTNQ9H8Y1 702 aa11.1□□□□□ -0.63
TPM3-212ENST00000368533 CTNNAL1Q9UBT7 734 aa11.1□□□□□ -0.63
TPM3-212ENST00000368533 SLC12A4Q9UP95 1085 aa11.1□□□□□ -0.63
TPM3-212ENST00000368533 XPOTO43592 962 aaKnown RBP11.09□□□□□ -0.63
TPM3-212ENST00000368533 RNF8O76064 485 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 LSM8O95777 96 aaKnown RBP11.09□□□□□ -0.63
TPM3-212ENST00000368533 ATXN8OSP0DMR3 200 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 PDGFRAP16234 1089 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 CYP2C18P33260 490 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 OR1G1P47890 313 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 AUHQ13825 339 aaKnown RBP11.09□□□□□ -0.63
TPM3-212ENST00000368533 TRPM8Q7Z2W7 1104 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 B3GALNT2Q8NCR0 500 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 ADAM32Q8TC27 787 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 SNF8Q96H20 258 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 NAF1Q96HR8 494 aaKnown RBP11.09□□□□□ -0.63
TPM3-212ENST00000368533 OCEL1Q9H607 264 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 A0A0U1RQF3 1178 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 ARVCFO00192 962 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 FSCN2O14926 492 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 NBNO60934 754 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 CCL5P13501 91 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 PCK1P35558 622 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 MMP13P45452 471 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 ARPP19P56211 112 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 NCALDP61601 193 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 PDCD2Q16342 344 aaPredicted RBP11.09□□□□□ -0.63
TPM3-212ENST00000368533 SYCP2LQ5T4T6 812 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 ANO7Q6IWH7 933 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 CROCCP2Q86T23 111 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 NT5DC4Q86YG4 428 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 KLHL23Q8NBE8 558 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 RXFP2Q8WXD0 754 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 KLHL29Q96CT2 875 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 C9orf72Q96LT7 481 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 CALN1Q9BXU9 219 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 LRRC19Q9H756 370 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 TMPRSS4Q9NRS4 437 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 TMEM30AQ9NV96 361 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 CHD7Q9P2D1 2997 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 SRRM3A6NNA2 597 aaPredicted RBP11.09□□□□□ -0.63
TPM3-212ENST00000368533 H0Y3Z8 333 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 PAPSS1O43252 624 aaPredicted RBP11.09□□□□□ -0.63
TPM3-212ENST00000368533 DDHD2O94830 711 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 CREB1P16220 341 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 ATP2A2P16615 1042 aaKnown RBP11.09□□□□□ -0.63
TPM3-212ENST00000368533 CETN2P41208 172 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 NRLP54845 237 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 PITX1P78337 314 aaPredicted RBP11.09□□□□□ -0.63
TPM3-212ENST00000368533 ADIGQ0VDE8 80 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 MMRN1Q13201 1228 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 SIX1Q15475 284 aaPredicted RBP11.09□□□□□ -0.63
TPM3-212ENST00000368533 SPDYCQ5MJ68 293 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 LCLAT1Q6UWP7 414 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 ECHDC2Q86YB7 292 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 HACE1Q8IYU2 909 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 GRK7Q8WTQ7 553 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 ZNF518BQ9C0D4 1074 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 IP6K2Q9UHH9 426 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 DERAQ9Y315 318 aa11.09□□□□□ -0.63
TPM3-212ENST00000368533 TCRBV5S1A1TA0A578 114 aa11.08□□□□□ -0.64
TPM3-212ENST00000368533 MOXD2PA6NHM9 499 aa11.08□□□□□ -0.64
TPM3-212ENST00000368533 LRCH4O75427 683 aa11.08□□□□□ -0.64
TPM3-212ENST00000368533 ZNF268Q14587 947 aaPredicted RBP11.08□□□□□ -0.64
TPM3-212ENST00000368533 SDHAF4Q5VUM1 108 aa11.08□□□□□ -0.64
TPM3-212ENST00000368533 NUGGCQ68CJ6 796 aa11.08□□□□□ -0.64
TPM3-212ENST00000368533 LRRC8DQ7L1W4 858 aa11.08□□□□□ -0.64
TPM3-212ENST00000368533 RHOT1Q8IXI2 618 aa11.08□□□□□ -0.64
TPM3-212ENST00000368533 PHC3Q8NDX5 983 aa11.08□□□□□ -0.64
TPM3-212ENST00000368533 ATL2Q8NHH9 583 aa11.08□□□□□ -0.64
TPM3-212ENST00000368533 MAIP1Q8WWC4 291 aa11.08□□□□□ -0.64
TPM3-212ENST00000368533 PGLYRP2Q96PD5 576 aa11.08□□□□□ -0.64
TPM3-212ENST00000368533 ADAM33Q9BZ11 813 aa11.08□□□□□ -0.64
TPM3-212ENST00000368533 NSRP1Q9H0G5 558 aaKnown RBP11.08□□□□□ -0.64
TPM3-212ENST00000368533 CRTAC1Q9NQ79 661 aa11.08□□□□□ -0.64
TPM3-212ENST00000368533 KRT82Q9NSB4 513 aa11.08□□□□□ -0.64
TPM3-212ENST00000368533 ZNF148Q9UQR1 794 aa11.08□□□□□ -0.64
TPM3-212ENST00000368533 ATP11BQ9Y2G3 1177 aa11.08□□□□□ -0.64
TPM3-212ENST00000368533 EYSQ5T1H1 3165 aa11.08□□□□□ -0.64
TPM3-212ENST00000368533 TMEM120BA0PK00 339 aa11.08□□□□□ -0.64
TPM3-212ENST00000368533 FAM163BP0C2L3 166 aa11.08□□□□□ -0.64
TPM3-212ENST00000368533 ITIH2P19823 946 aa11.08□□□□□ -0.64
TPM3-212ENST00000368533 ROR2Q01974 943 aaKnown RBP11.08□□□□□ -0.64
TPM3-212ENST00000368533 PCBP1Q15365 356 aaKnown RBP eCLIP11.08□□□□□ -0.648e-7■■□□□ 13.6
TPM3-212ENST00000368533 CYP1B1Q16678 543 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms