RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 SLC12A8A0AV02 714 aa14.53□□□□□ -0.08
TPM3-211ENST00000368531 HEPACAM2A8MVW5 462 aa14.53□□□□□ -0.08
TPM3-211ENST00000368531 LOC730098B7Z3J9 87 aa14.53□□□□□ -0.08
TPM3-211ENST00000368531 HSF2BPO75031 334 aa14.53□□□□□ -0.08
TPM3-211ENST00000368531 GALCP54803 685 aa14.53□□□□□ -0.08
TPM3-211ENST00000368531 MTF1Q14872 753 aa14.53□□□□□ -0.08
TPM3-211ENST00000368531 PPP1R2P3Q6NXS1 205 aa14.53□□□□□ -0.08
TPM3-211ENST00000368531 DNAJC24Q6P3W2 148 aa14.53□□□□□ -0.08
TPM3-211ENST00000368531 SLC26A9Q7LBE3 791 aa14.53□□□□□ -0.08
TPM3-211ENST00000368531 TADA2BQ86TJ2 420 aa14.53□□□□□ -0.08
TPM3-211ENST00000368531 TMTC1Q8IUR5 882 aa14.53□□□□□ -0.08
TPM3-211ENST00000368531 ZDHHC14Q8IZN3 488 aa14.53□□□□□ -0.08
TPM3-211ENST00000368531 EMC1Q8N766 993 aa14.53□□□□□ -0.08
TPM3-211ENST00000368531 JOSD2Q8TAC2 188 aa14.53□□□□□ -0.08
TPM3-211ENST00000368531 RSPRY1Q96DX4 576 aa14.53□□□□□ -0.08
TPM3-211ENST00000368531 WDR35Q9P2L0 1181 aa14.53□□□□□ -0.08
TPM3-211ENST00000368531 CNOT8Q9UFF9 292 aaKnown RBP14.53□□□□□ -0.08
TPM3-211ENST00000368531 ZMYM5Q9UJ78 669 aa14.53□□□□□ -0.08
TPM3-211ENST00000368531 NUMBLQ9Y6R0 609 aa14.53□□□□□ -0.08
TPM3-211ENST00000368531 SYNJ2BP-COX16A0A087WUM0 186 aa14.52□□□□□ -0.09
TPM3-211ENST00000368531 SOBPA7XYQ1 873 aa14.52□□□□□ -0.09
TPM3-211ENST00000368531 MSI1O43347 362 aaKnown RBP14.52□□□□□ -0.09
TPM3-211ENST00000368531 DAB1O75553 588 aa14.52□□□□□ -0.09
TPM3-211ENST00000368531 OLFM2O95897 454 aa14.52□□□□□ -0.09
TPM3-211ENST00000368531 PTMAP06454 111 aaKnown RBP14.52□□□□□ -0.09
TPM3-211ENST00000368531 GLI1P08151 1106 aa14.52□□□□□ -0.09
TPM3-211ENST00000368531 KRT3P12035 628 aa14.52□□□□□ -0.09
TPM3-211ENST00000368531 PFKLP17858 780 aa14.52□□□□□ -0.09
TPM3-211ENST00000368531 FCARP24071 287 aa14.52□□□□□ -0.09
TPM3-211ENST00000368531 CYLC1P35663 651 aaPredicted RBP14.52□□□□□ -0.09
TPM3-211ENST00000368531 PITX1P78337 314 aaPredicted RBP14.52□□□□□ -0.09
TPM3-211ENST00000368531 SLC7A9P82251 487 aa14.52□□□□□ -0.09
TPM3-211ENST00000368531 ZXDBP98169 803 aa14.52□□□□□ -0.09
TPM3-211ENST00000368531 HTR4Q13639 388 aa14.52□□□□□ -0.09
TPM3-211ENST00000368531 GRM2Q14416 872 aa14.52□□□□□ -0.09
TPM3-211ENST00000368531 TJAP1Q5JTD0 557 aa14.52□□□□□ -0.09
TPM3-211ENST00000368531 MTSS1LQ765P7 747 aa14.52□□□□□ -0.09
TPM3-211ENST00000368531 CELF5Q8N6W0 485 aaKnown RBP14.52□□□□□ -0.09
TPM3-211ENST00000368531 SH3RF2Q8TEC5 729 aa14.52□□□□□ -0.09
TPM3-211ENST00000368531 WBP2Q969T9 261 aa14.52□□□□□ -0.09
TPM3-211ENST00000368531 VCPIP1Q96JH7 1222 aa14.52□□□□□ -0.09
TPM3-211ENST00000368531 CDK5RAP1Q96SZ6 601 aaKnown RBP14.52□□□□□ -0.09
TPM3-211ENST00000368531 TRIM62Q9BVG3 475 aa14.52□□□□□ -0.09
TPM3-211ENST00000368531 KLF16Q9BXK1 252 aaPredicted RBP14.52□□□□□ -0.09
TPM3-211ENST00000368531 PACSIN1Q9BY11 444 aa14.52□□□□□ -0.09
TPM3-211ENST00000368531 THAP2Q9H0W7 228 aa14.52□□□□□ -0.09
TPM3-211ENST00000368531 OLA1Q9NTK5 396 aaKnown RBP14.52□□□□□ -0.09
TPM3-211ENST00000368531 ASNSD1Q9NWL6 643 aa14.52□□□□□ -0.09
TPM3-211ENST00000368531 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.52□□□□□ -0.09
TPM3-211ENST00000368531 COX16Q9P0S2 106 aa14.52□□□□□ -0.09
TPM3-211ENST00000368531 CFAP97Q9P2B7 532 aa14.52□□□□□ -0.09
TPM3-211ENST00000368531 LEFTY2O00292 366 aa14.51□□□□□ -0.09
TPM3-211ENST00000368531 ZNF263O14978 683 aa14.51□□□□□ -0.09
TPM3-211ENST00000368531 H2AFZP0C0S5 128 aa14.51□□□□□ -0.09
TPM3-211ENST00000368531 FECHP22830 423 aa14.51□□□□□ -0.09
TPM3-211ENST00000368531 FLT3P36888 993 aa14.51□□□□□ -0.09
TPM3-211ENST00000368531 SCNN1AP37088 669 aa14.51□□□□□ -0.09
TPM3-211ENST00000368531 SULT1E1P49888 294 aa14.51□□□□□ -0.09
TPM3-211ENST00000368531 TRNP1Q6NT89 227 aa14.51□□□□□ -0.09
TPM3-211ENST00000368531 MSANTD2Q6P1R3 559 aa14.51□□□□□ -0.09
TPM3-211ENST00000368531 DCUN1D2Q6PH85 259 aa14.51□□□□□ -0.09
TPM3-211ENST00000368531 VITQ6UXI7 678 aa14.51□□□□□ -0.09
TPM3-211ENST00000368531 RAD9BQ6WBX8 426 aa14.51□□□□□ -0.09
TPM3-211ENST00000368531 H2AFVQ71UI9 128 aa14.51□□□□□ -0.09
TPM3-211ENST00000368531 TAC4Q86UU9 113 aa14.51□□□□□ -0.09
TPM3-211ENST00000368531 CCDC170Q8IYT3 715 aa14.51□□□□□ -0.09
TPM3-211ENST00000368531 ZNF276Q8N554 614 aa14.51□□□□□ -0.09
TPM3-211ENST00000368531 C3orf20Q8ND61 904 aa14.51□□□□□ -0.09
TPM3-211ENST00000368531 RIN3Q8TB24 985 aa14.51□□□□□ -0.09
TPM3-211ENST00000368531 ADAMTS19Q8TE59 1207 aa14.51□□□□□ -0.09
TPM3-211ENST00000368531 DQX1Q8TE96 717 aaKnown RBP14.51□□□□□ -0.09
TPM3-211ENST00000368531 TRIM11Q96F44 468 aa14.51□□□□□ -0.09
TPM3-211ENST00000368531 LRRC3BQ96PB8 259 aa14.51□□□□□ -0.09
TPM3-211ENST00000368531 MCEEQ96PE7 176 aa14.51□□□□□ -0.09
TPM3-211ENST00000368531 SLC2A13Q96QE2 648 aa14.51□□□□□ -0.09
TPM3-211ENST00000368531 FAM204AQ9H8W3 233 aa14.51□□□□□ -0.09
TPM3-211ENST00000368531 KCNK12Q9HB15 430 aa14.51□□□□□ -0.09
TPM3-211ENST00000368531 TMEM59LQ9UK28 342 aa14.51□□□□□ -0.09
TPM3-211ENST00000368531 NENFQ9UMX5 172 aa14.51□□□□□ -0.09
TPM3-211ENST00000368531 ARHGAP26Q9UNA1 814 aa14.51□□□□□ -0.09
TPM3-211ENST00000368531 SH3BP1Q9Y3L3 701 aa14.51□□□□□ -0.09
TPM3-211ENST00000368531 EPN1Q9Y6I3 576 aaPredicted RBP14.51□□□□□ -0.09
TPM3-211ENST00000368531 TCRBV5S1A1TA0A578 114 aa14.5□□□□□ -0.09
TPM3-211ENST00000368531 SIGLEC16A6NMB1 481 aa14.5□□□□□ -0.09
TPM3-211ENST00000368531 ANHXE9PGG2 379 aa14.5□□□□□ -0.09
TPM3-211ENST00000368531 M0QYT0 321 aa14.5□□□□□ -0.09
TPM3-211ENST00000368531 TRUB2O95900 331 aaKnown RBP14.5□□□□□ -0.09
TPM3-211ENST00000368531 PDGFRAP16234 1089 aa14.5□□□□□ -0.09
TPM3-211ENST00000368531 TFE3P19532 575 aaPredicted RBP14.5□□□□□ -0.09
TPM3-211ENST00000368531 NOS2P35228 1153 aa14.5□□□□□ -0.09
TPM3-211ENST00000368531 RFC1P35251 1148 aaPredicted RBP14.5□□□□□ -0.09
TPM3-211ENST00000368531 MATKP42679 507 aa14.5□□□□□ -0.09
TPM3-211ENST00000368531 MAGEA1P43355 309 aa14.5□□□□□ -0.09
TPM3-211ENST00000368531 RPL7AP62424 266 aaKnown RBP14.5□□□□□ -0.09
TPM3-211ENST00000368531 GPC5P78333 572 aa14.5□□□□□ -0.09
TPM3-211ENST00000368531 ATP11AP98196 1134 aa14.5□□□□□ -0.09
TPM3-211ENST00000368531 NME3Q13232 169 aa14.5□□□□□ -0.09
TPM3-211ENST00000368531 MAMLD1Q13495 774 aa14.5□□□□□ -0.09
TPM3-211ENST00000368531 SPA17Q15506 151 aa14.5□□□□□ -0.09
TPM3-211ENST00000368531 CDO1Q16878 200 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms