RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 MS4A14Q96JA4 679 aa16.59■□□□□ 0.25
LMNA-203ENST00000368297 NAP1L3Q99457 506 aaPredicted RBP16.59■□□□□ 0.25
LMNA-203ENST00000368297 RAB6CQ9H0N0 254 aa16.59■□□□□ 0.25
LMNA-203ENST00000368297 ARFGAP3Q9NP61 516 aa16.59■□□□□ 0.25
LMNA-203ENST00000368297 ABCC13Q9NSE7 274 aa16.59■□□□□ 0.25
LMNA-203ENST00000368297 IL37Q9NZH6 218 aa16.59■□□□□ 0.25
LMNA-203ENST00000368297 COX16Q9P0S2 106 aa16.59■□□□□ 0.25
LMNA-203ENST00000368297 CEP290O15078 2479 aa16.59■□□□□ 0.25
LMNA-203ENST00000368297 GREB1Q4ZG55 1949 aa16.59■□□□□ 0.25
LMNA-203ENST00000368297 M0QYT0 321 aa16.59■□□□□ 0.25
LMNA-203ENST00000368297 PGRMC1O00264 195 aaKnown RBP16.59■□□□□ 0.25
LMNA-203ENST00000368297 KRT1P04264 644 aa16.59■□□□□ 0.25
LMNA-203ENST00000368297 KRT7P08729 469 aa16.59■□□□□ 0.25
LMNA-203ENST00000368297 CSH1P0DML2 217 aa16.59■□□□□ 0.25
LMNA-203ENST00000368297 CSH2P0DML3 217 aa16.59■□□□□ 0.25
LMNA-203ENST00000368297 PCK1P35558 622 aa16.59■□□□□ 0.25
LMNA-203ENST00000368297 SEL1L2Q5TEA6 688 aa16.59■□□□□ 0.25
LMNA-203ENST00000368297 LRRC38Q5VT99 294 aa16.59■□□□□ 0.25
LMNA-203ENST00000368297 PDE12Q6L8Q7 609 aaKnown RBP16.59■□□□□ 0.25
LMNA-203ENST00000368297 CCDC149Q6ZUS6 474 aa16.59■□□□□ 0.25
LMNA-203ENST00000368297 STRADAQ7RTN6 431 aa16.59■□□□□ 0.25
LMNA-203ENST00000368297 KREMEN2Q8NCW0 462 aa16.59■□□□□ 0.25
LMNA-203ENST00000368297 RNF139Q8WU17 664 aa16.59■□□□□ 0.25
LMNA-203ENST00000368297 HNRNPLLQ8WVV9 542 aaKnown RBP16.59■□□□□ 0.25
LMNA-203ENST00000368297 SLITRK1Q96PX8 696 aa16.59■□□□□ 0.25
LMNA-203ENST00000368297 NPY6RQ99463 290 aa16.59■□□□□ 0.25
LMNA-203ENST00000368297 CARD9Q9H257 536 aa16.59■□□□□ 0.25
LMNA-203ENST00000368297 FAM204AQ9H8W3 233 aa16.59■□□□□ 0.25
LMNA-203ENST00000368297 NMUR1Q9HB89 426 aa16.59■□□□□ 0.25
LMNA-203ENST00000368297 KLHL11Q9NVR0 708 aa16.59■□□□□ 0.25
LMNA-203ENST00000368297 RRN3Q9NYV6 651 aa16.59■□□□□ 0.25
LMNA-203ENST00000368297 FBXW11Q9UKB1 542 aa16.59■□□□□ 0.25
LMNA-203ENST00000368297 USP18Q9UMW8 372 aa16.59■□□□□ 0.25
LMNA-203ENST00000368297 TRUB2O95900 331 aaKnown RBP16.58■□□□□ 0.24
LMNA-203ENST00000368297 PITX1P78337 314 aaPredicted RBP16.58■□□□□ 0.24
LMNA-203ENST00000368297 SLC25A11Q02978 314 aaKnown RBP16.58■□□□□ 0.24
LMNA-203ENST00000368297 DEUP1Q05D60 604 aa16.58■□□□□ 0.24
LMNA-203ENST00000368297 NME3Q13232 169 aa16.58■□□□□ 0.24
LMNA-203ENST00000368297 CAMK1Q14012 370 aa16.58■□□□□ 0.24
LMNA-203ENST00000368297 DCAF12L1Q5VU92 463 aa16.58■□□□□ 0.24
LMNA-203ENST00000368297 LILRA6Q6PI73 481 aa16.58■□□□□ 0.24
LMNA-203ENST00000368297 CCDC50Q8IVM0 306 aa16.58■□□□□ 0.24
LMNA-203ENST00000368297 KATNAL2Q8IYT4 538 aa16.58■□□□□ 0.24
LMNA-203ENST00000368297 CENPIQ92674 756 aaPredicted RBP16.58■□□□□ 0.24
LMNA-203ENST00000368297 TTLL2Q9BWV7 592 aa16.58■□□□□ 0.24
LMNA-203ENST00000368297 TLR8Q9NR97 1041 aaKnown RBP16.58■□□□□ 0.24
LMNA-203ENST00000368297 DDX56Q9NY93 547 aaKnown RBP16.58■□□□□ 0.24
LMNA-203ENST00000368297 ZNF638Q14966 1978 aaKnown RBP16.58■□□□□ 0.24
LMNA-203ENST00000368297 FAM92AA1XBS5 289 aa16.57■□□□□ 0.24
LMNA-203ENST00000368297 ATP8B1O43520 1251 aa16.57■□□□□ 0.24
LMNA-203ENST00000368297 LRG1P02750 347 aa16.57■□□□□ 0.24
LMNA-203ENST00000368297 RDXP35241 583 aaKnown RBP16.57■□□□□ 0.24
LMNA-203ENST00000368297 PGFP49763 221 aa16.57■□□□□ 0.24
LMNA-203ENST00000368297 HDAC4P56524 1084 aa16.57■□□□□ 0.24
LMNA-203ENST00000368297 SMTNL2Q2TAL5 461 aa16.57■□□□□ 0.24
LMNA-203ENST00000368297 MAP9Q49MG5 647 aa16.57■□□□□ 0.24
LMNA-203ENST00000368297 ATP13A4Q4VNC1 1196 aa16.57■□□□□ 0.24
LMNA-203ENST00000368297 TXNRD3NBQ6F5E7 133 aa16.57■□□□□ 0.24
LMNA-203ENST00000368297 BEND5Q7L4P6 421 aa16.57■□□□□ 0.24
LMNA-203ENST00000368297 POLNQ7Z5Q5 900 aa16.57■□□□□ 0.24
LMNA-203ENST00000368297 RASGEF1CQ8N431 466 aa16.57■□□□□ 0.24
LMNA-203ENST00000368297 ADAM32Q8TC27 787 aa16.57■□□□□ 0.24
LMNA-203ENST00000368297 HSPH1Q92598 858 aa16.57■□□□□ 0.24
LMNA-203ENST00000368297 ACSF2Q96CM8 615 aaPredicted RBP16.57■□□□□ 0.24
LMNA-203ENST00000368297 PNKPQ96T60 521 aa16.57■□□□□ 0.24
LMNA-203ENST00000368297 DDIT4Q9NX09 232 aa16.57■□□□□ 0.24
LMNA-203ENST00000368297 TTC7AQ9ULT0 858 aaPredicted RBP16.57■□□□□ 0.24
LMNA-203ENST00000368297 CCDC188H7C350 402 aa16.56■□□□□ 0.24
LMNA-203ENST00000368297 ZRANB2O95218 330 aaKnown RBP eCLIP16.56■□□□□ 0.24
LMNA-203ENST00000368297 C8AP07357 584 aa16.56■□□□□ 0.24
LMNA-203ENST00000368297 PYGMP11217 842 aa16.56■□□□□ 0.24
LMNA-203ENST00000368297 RALAP11233 206 aa16.56■□□□□ 0.24
LMNA-203ENST00000368297 IL1R2P27930 398 aa16.56■□□□□ 0.24
LMNA-203ENST00000368297 CETN2P41208 172 aa16.56■□□□□ 0.24
LMNA-203ENST00000368297 PSEN1P49768 467 aa16.56■□□□□ 0.24
LMNA-203ENST00000368297 ATXN1P54253 815 aaKnown RBP16.56■□□□□ 0.24
LMNA-203ENST00000368297 KCNT1Q5JUK3 1230 aa16.56■□□□□ 0.24
LMNA-203ENST00000368297 OTUD1Q5VV17 481 aaPredicted RBP16.56■□□□□ 0.24
LMNA-203ENST00000368297 C8orf74Q6P047 294 aa16.56■□□□□ 0.24
LMNA-203ENST00000368297 AADACL2Q6P093 401 aa16.56■□□□□ 0.24
LMNA-203ENST00000368297 CHRDL2Q6WN34 429 aa16.56■□□□□ 0.24
LMNA-203ENST00000368297 SND1Q7KZF4 910 aaKnown RBP eCLIP16.56■□□□□ 0.241e-8■■□□□ 12.8
LMNA-203ENST00000368297 ITIH5Q86UX2 942 aa16.56■□□□□ 0.24
LMNA-203ENST00000368297 PDZD8Q8NEN9 1154 aa16.56■□□□□ 0.24
LMNA-203ENST00000368297 DQX1Q8TE96 717 aaKnown RBP16.56■□□□□ 0.24
LMNA-203ENST00000368297 GDPD5Q8WTR4 605 aa16.56■□□□□ 0.24
LMNA-203ENST00000368297 NT5C3BQ969T7 300 aa16.56■□□□□ 0.24
LMNA-203ENST00000368297 ZNF512Q96ME7 567 aaPredicted RBP16.56■□□□□ 0.24
LMNA-203ENST00000368297 PEBP4Q96S96 227 aa16.56■□□□□ 0.24
LMNA-203ENST00000368297 ADAM33Q9BZ11 813 aa16.56■□□□□ 0.24
LMNA-203ENST00000368297 RBM12Q9NTZ6 932 aaKnown RBP16.56■□□□□ 0.24
LMNA-203ENST00000368297 SMARCAL1Q9NZC9 954 aa16.56■□□□□ 0.24
LMNA-203ENST00000368297 LRRD1A4D1F6 860 aa16.56■□□□□ 0.24
LMNA-203ENST00000368297 PI4K2BG5E9Z4 385 aa16.56■□□□□ 0.24
LMNA-203ENST00000368297 CLASP2O75122 1294 aaKnown RBP16.56■□□□□ 0.24
LMNA-203ENST00000368297 RARAP10276 462 aa16.56■□□□□ 0.24
LMNA-203ENST00000368297 RARGP13631 454 aa16.56■□□□□ 0.24
LMNA-203ENST00000368297 HMGA1P17096 107 aaKnown RBP16.56■□□□□ 0.24
LMNA-203ENST00000368297 GBP1P32455 592 aa16.56■□□□□ 0.24
LMNA-203ENST00000368297 CLCN4P51793 760 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms