RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 FBXO21O94952 628 aa13.28□□□□□ -0.28
PTPRK-207ENST00000368226 PRIM2P49643 509 aa13.28□□□□□ -0.28
PTPRK-207ENST00000368226 SCNN1GP51170 649 aa13.28□□□□□ -0.28
PTPRK-207ENST00000368226 CCDC15Q0P6D6 951 aa13.28□□□□□ -0.28
PTPRK-207ENST00000368226 ABRAQ8N0Z2 381 aa13.28□□□□□ -0.28
PTPRK-207ENST00000368226 GLIS3Q8NEA6 775 aa13.28□□□□□ -0.28
PTPRK-207ENST00000368226 ZNF606Q8WXB4 792 aa13.28□□□□□ -0.28
PTPRK-207ENST00000368226 PAFAH2Q99487 392 aa13.28□□□□□ -0.28
PTPRK-207ENST00000368226 UBXN6Q9BZV1 441 aa13.28□□□□□ -0.28
PTPRK-207ENST00000368226 COPS7BQ9H9Q2 264 aaPredicted RBP13.28□□□□□ -0.28
PTPRK-207ENST00000368226 MYPNQ86TC9 1320 aa13.28□□□□□ -0.28
PTPRK-207ENST00000368226 MOXD2PA6NHM9 499 aa13.28□□□□□ -0.28
PTPRK-207ENST00000368226 SERPINI2O75830 405 aa13.28□□□□□ -0.28
PTPRK-207ENST00000368226 SERPINB8P50452 374 aa13.28□□□□□ -0.28
PTPRK-207ENST00000368226 LLGL2Q6P1M3 1020 aa13.28□□□□□ -0.28
PTPRK-207ENST00000368226 H2AFY2Q9P0M6 372 aaPredicted RBP13.28□□□□□ -0.28
PTPRK-207ENST00000368226 KIAA1257Q9ULG3 409 aa13.28□□□□□ -0.28
PTPRK-207ENST00000368226 PHTF1Q9UMS5 762 aa13.28□□□□□ -0.28
PTPRK-207ENST00000368226 WDR27A2RRH5 827 aa13.28□□□□□ -0.28
PTPRK-207ENST00000368226 F8W810 466 aa13.28□□□□□ -0.28
PTPRK-207ENST00000368226 KLHL2O95198 593 aa13.28□□□□□ -0.28
PTPRK-207ENST00000368226 GLP2RO95838 553 aa13.28□□□□□ -0.28
PTPRK-207ENST00000368226 UBA1P22314 1058 aaKnown RBP13.28□□□□□ -0.28
PTPRK-207ENST00000368226 CCR1P32246 355 aa13.28□□□□□ -0.28
PTPRK-207ENST00000368226 HALP42357 657 aa13.28□□□□□ -0.28
PTPRK-207ENST00000368226 DNAL1Q4LDG9 190 aa13.28□□□□□ -0.28
PTPRK-207ENST00000368226 TRMT11Q7Z4G4 463 aaKnown RBP13.28□□□□□ -0.28
PTPRK-207ENST00000368226 TRPM4Q8TD43 1214 aa13.28□□□□□ -0.28
PTPRK-207ENST00000368226 CMTM5Q96DZ9 223 aa13.28□□□□□ -0.28
PTPRK-207ENST00000368226 PHF21BQ96EK2 531 aa13.28□□□□□ -0.28
PTPRK-207ENST00000368226 ROPN1BQ9BZX4 212 aaPredicted RBP13.28□□□□□ -0.28
PTPRK-207ENST00000368226 ROPN1Q9HAT0 212 aaPredicted RBP13.28□□□□□ -0.28
PTPRK-207ENST00000368226 GPAMQ9HCL2 828 aa13.28□□□□□ -0.28
PTPRK-207ENST00000368226 ATP13A1Q9HD20 1204 aa13.28□□□□□ -0.28
PTPRK-207ENST00000368226 ACP6Q9NPH0 428 aa13.28□□□□□ -0.28
PTPRK-207ENST00000368226 IPPQ9Y573 584 aa13.28□□□□□ -0.28
PTPRK-207ENST00000368226 ITGALP20701 1170 aa13.28□□□□□ -0.28
PTPRK-207ENST00000368226 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.28□□□□□ -0.28
PTPRK-207ENST00000368226 LRRN4Q8WUT4 740 aa13.28□□□□□ -0.28
PTPRK-207ENST00000368226 CDC42EP4Q9H3Q1 356 aaKnown RBP13.28□□□□□ -0.28
PTPRK-207ENST00000368226 RERGLQ9H628 205 aa13.28□□□□□ -0.28
PTPRK-207ENST00000368226 EVPLLA8MZ36 301 aa13.27□□□□□ -0.28
PTPRK-207ENST00000368226 XPO1O14980 1071 aaKnown RBP13.27□□□□□ -0.28
PTPRK-207ENST00000368226 IMPDH2P12268 514 aa13.27□□□□□ -0.28
PTPRK-207ENST00000368226 CCDC81Q6ZN84 652 aa13.27□□□□□ -0.28
PTPRK-207ENST00000368226 LRRC6Q86X45 466 aa13.27□□□□□ -0.28
PTPRK-207ENST00000368226 MCOLN2Q8IZK6 566 aa13.27□□□□□ -0.28
PTPRK-207ENST00000368226 DEFB106AQ8N104 65 aa13.27□□□□□ -0.28
PTPRK-207ENST00000368226 CNDP1Q96KN2 507 aa13.27□□□□□ -0.28
PTPRK-207ENST00000368226 ACOX2Q99424 681 aa13.27□□□□□ -0.28
PTPRK-207ENST00000368226 INTS13Q9NVM9 706 aa13.27□□□□□ -0.28
PTPRK-207ENST00000368226 VANGL2Q9ULK5 521 aa13.27□□□□□ -0.28
PTPRK-207ENST00000368226 IGF2BP3O00425 579 aaKnown RBP eCLIP13.27□□□□□ -0.28
PTPRK-207ENST00000368226 RECQL4O94761 1208 aa13.27□□□□□ -0.28
PTPRK-207ENST00000368226 AMHP03971 560 aa13.27□□□□□ -0.28
PTPRK-207ENST00000368226 UBTFL6P0CB48 400 aaPredicted RBP13.27□□□□□ -0.28
PTPRK-207ENST00000368226 EML3Q32P44 896 aa13.27□□□□□ -0.28
PTPRK-207ENST00000368226 CENPPQ6IPU0 288 aa13.27□□□□□ -0.28
PTPRK-207ENST00000368226 ZNF333Q96JL9 665 aa13.27□□□□□ -0.28
PTPRK-207ENST00000368226 SLC4A9Q96Q91 983 aa13.27□□□□□ -0.28
PTPRK-207ENST00000368226 LRRC40Q9H9A6 602 aa13.27□□□□□ -0.28
PTPRK-207ENST00000368226 EXOSC4Q9NPD3 245 aaKnown RBP13.27□□□□□ -0.28
PTPRK-207ENST00000368226 TRPV2Q9Y5S1 764 aa13.27□□□□□ -0.28
PTPRK-207ENST00000368226 GNG14A0A1W2PPG7 69 aa13.27□□□□□ -0.29
PTPRK-207ENST00000368226 E9PBE3 544 aa13.27□□□□□ -0.29
PTPRK-207ENST00000368226 CCNT2O60583 730 aaKnown RBP13.27□□□□□ -0.29
PTPRK-207ENST00000368226 KLHL41O60662 606 aa13.27□□□□□ -0.29
PTPRK-207ENST00000368226 CBWD6Q4V339 395 aa13.27□□□□□ -0.29
PTPRK-207ENST00000368226 CBWD3Q5JTY5 395 aa13.27□□□□□ -0.29
PTPRK-207ENST00000368226 CBWD5Q5RIA9 395 aa13.27□□□□□ -0.29
PTPRK-207ENST00000368226 ITIH5Q86UX2 942 aa13.27□□□□□ -0.29
PTPRK-207ENST00000368226 ZFP42Q96MM3 310 aa13.27□□□□□ -0.29
PTPRK-207ENST00000368226 ILKAPQ9H0C8 392 aaPredicted RBP13.27□□□□□ -0.29
PTPRK-207ENST00000368226 VTA1Q9NP79 307 aa13.27□□□□□ -0.29
PTPRK-207ENST00000368226 GID8Q9NWU2 228 aa13.27□□□□□ -0.29
PTPRK-207ENST00000368226 EIF3LQ9Y262 564 aaKnown RBP13.27□□□□□ -0.29
PTPRK-207ENST00000368226 KCNK1O00180 336 aa13.27□□□□□ -0.29
PTPRK-207ENST00000368226 DARSP14868 501 aaKnown RBP13.27□□□□□ -0.29
PTPRK-207ENST00000368226 BOP1Q14137 746 aaKnown RBP13.27□□□□□ -0.29
PTPRK-207ENST00000368226 ACTL9Q8TC94 416 aa13.27□□□□□ -0.29
PTPRK-207ENST00000368226 SMARCD1Q96GM5 515 aa13.27□□□□□ -0.29
PTPRK-207ENST00000368226 KIF20BQ96Q89 1820 aa13.27□□□□□ -0.29
PTPRK-207ENST00000368226 NR5A2O00482 541 aa13.27□□□□□ -0.29
PTPRK-207ENST00000368226 CRTAMO95727 393 aa13.27□□□□□ -0.29
PTPRK-207ENST00000368226 ABCB1P08183 1280 aaPredicted RBP13.27□□□□□ -0.29
PTPRK-207ENST00000368226 SLC12A3P55017 1021 aa13.27□□□□□ -0.29
PTPRK-207ENST00000368226 TP53BP2Q13625 1128 aa13.27□□□□□ -0.29
PTPRK-207ENST00000368226 SHROOM1Q2M3G4 852 aaPredicted RBP13.27□□□□□ -0.29
PTPRK-207ENST00000368226 C4orf22Q6V702 233 aa13.27□□□□□ -0.29
PTPRK-207ENST00000368226 CERS5Q8N5B7 392 aa13.27□□□□□ -0.29
PTPRK-207ENST00000368226 USP6NLQ92738 828 aa13.27□□□□□ -0.29
PTPRK-207ENST00000368226 KCNK16Q96T55 309 aa13.27□□□□□ -0.29
PTPRK-207ENST00000368226 VIPAS39Q9H9C1 493 aa13.27□□□□□ -0.29
PTPRK-207ENST00000368226 TRDMT1O14717 391 aaKnown RBP13.26□□□□□ -0.29
PTPRK-207ENST00000368226 KPNA6O60684 536 aa13.26□□□□□ -0.29
PTPRK-207ENST00000368226 TGFB3P10600 412 aa13.26□□□□□ -0.29
PTPRK-207ENST00000368226 BGNP21810 368 aa13.26□□□□□ -0.29
PTPRK-207ENST00000368226 ALDH9A1P49189 494 aa13.26□□□□□ -0.29
PTPRK-207ENST00000368226 HDAC4P56524 1084 aa13.26□□□□□ -0.29
PTPRK-207ENST00000368226 PPM1LQ5SGD2 360 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms