RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 SLC45A4Q5BKX6 768 aa12.05□□□□□ -0.48
COPA-202ENST00000368069 SNX30Q5VWJ9 437 aa12.05□□□□□ -0.48
COPA-202ENST00000368069 PCYOX1LQ8NBM8 494 aa12.05□□□□□ -0.48
COPA-202ENST00000368069 BSNDQ8WZ55 320 aa12.05□□□□□ -0.48
COPA-202ENST00000368069 INPP5DQ92835 1189 aa12.05□□□□□ -0.48
COPA-202ENST00000368069 CCDC134Q9H6E4 229 aa12.05□□□□□ -0.48
COPA-202ENST00000368069 IL1RL2Q9HB29 575 aa12.05□□□□□ -0.48
COPA-202ENST00000368069 SETD1AO15047 1707 aaKnown RBP12.05□□□□□ -0.48
COPA-202ENST00000368069 ATXN2Q99700 1313 aaKnown RBP12.05□□□□□ -0.48
COPA-202ENST00000368069 TRPC5OSA6NMA1 111 aa12.05□□□□□ -0.48
COPA-202ENST00000368069 MEI4A8MW99 385 aa12.05□□□□□ -0.48
COPA-202ENST00000368069 MYCP01106 439 aaPredicted RBP12.05□□□□□ -0.48
COPA-202ENST00000368069 NFICP08651 508 aa12.05□□□□□ -0.48
COPA-202ENST00000368069 SOX11P35716 441 aa12.05□□□□□ -0.48
COPA-202ENST00000368069 ETFBP38117 255 aa12.05□□□□□ -0.48
COPA-202ENST00000368069 RTP1P59025 263 aa12.05□□□□□ -0.48
COPA-202ENST00000368069 TAF1CQ15572 869 aaPredicted RBP12.05□□□□□ -0.48
COPA-202ENST00000368069 FAM83EQ2M2I3 478 aa12.05□□□□□ -0.48
COPA-202ENST00000368069 MBOAT7Q96N66 472 aa12.05□□□□□ -0.48
COPA-202ENST00000368069 GEMIN8Q9NWZ8 242 aaKnown RBP12.05□□□□□ -0.48
COPA-202ENST00000368069 hCG_2014768A0A024R1R8 64 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 CETPP11597 493 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 SLC1A6P48664 564 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 ZBTB41Q5SVQ8 909 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 SEL1L3Q68CR1 1132 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 ZC3H15Q8WU90 426 aaKnown RBP12.04□□□□□ -0.48
COPA-202ENST00000368069 SETD4Q9NVD3 440 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 DMAC2Q9NW81 257 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 VANGL2Q9ULK5 521 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 ABT1Q9ULW3 272 aaKnown RBP12.04□□□□□ -0.48
COPA-202ENST00000368069 CAPRIN1Q14444 709 aaKnown RBP12.04□□□□□ -0.48
COPA-202ENST00000368069 CES3Q6UWW8 571 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 ANGPTL8Q6UXH0 198 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 BBS12Q6ZW61 710 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 THAP1Q9NVV9 213 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 SCN11AQ9UI33 1791 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 IQCA1LA6NCM1 817 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 H2AFYO75367 372 aaKnown RBP12.04□□□□□ -0.48
COPA-202ENST00000368069 NDUFS3O75489 264 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 SERPINE1P05121 402 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 TKTL1P51854 596 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 GEMP55040 296 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 SLC34A1Q06495 639 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 ADIGQ0VDE8 80 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 FOXD4Q12950 439 aaPredicted RBP12.04□□□□□ -0.48
COPA-202ENST00000368069 CATSPERGQ6ZRH7 1159 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 TRABD2AQ86V40 505 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 POU5F2Q8N7G0 328 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 CACYBPQ9HB71 228 aaKnown RBP12.04□□□□□ -0.48
COPA-202ENST00000368069 CHST12Q9NRB3 414 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 ETNK2Q9NVF9 386 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 PPP2R3BQ9Y5P8 575 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 SUPT3HB4E1H0 165 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 SUPT3HO75486 399 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 F9P00740 461 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 AKAP5P24588 427 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 ACAT1P24752 427 aaKnown RBP12.04□□□□□ -0.48
COPA-202ENST00000368069 GP5P40197 560 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 MMRN1Q13201 1228 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 TMEM132BQ14DG7 1078 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 GRIK4Q16099 956 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 MFSD5Q6N075 450 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 TDRD5Q8NAT2 981 aaKnown RBP12.04□□□□□ -0.48
COPA-202ENST00000368069 ANKRD27Q96NW4 1050 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 CCDC90BQ9GZT6 254 aa12.04□□□□□ -0.48
COPA-202ENST00000368069 C5P01031 1676 aa12.03□□□□□ -0.48
COPA-202ENST00000368069 C17orf102A2RUQ5 167 aa12.03□□□□□ -0.48
COPA-202ENST00000368069 SPATA31C2B4DYI2 1134 aa12.03□□□□□ -0.48
COPA-202ENST00000368069 RNF103O00237 685 aa12.03□□□□□ -0.48
COPA-202ENST00000368069 TRUB2O95900 331 aaKnown RBP12.03□□□□□ -0.48
COPA-202ENST00000368069 ASS1P00966 412 aaKnown RBP12.03□□□□□ -0.48
COPA-202ENST00000368069 STMN1P16949 149 aa12.03□□□□□ -0.48
COPA-202ENST00000368069 NCALDP61601 193 aa12.03□□□□□ -0.48
COPA-202ENST00000368069 BNC2Q6ZN30 1099 aaPredicted RBP12.03□□□□□ -0.48
COPA-202ENST00000368069 DEFB107AQ8IZN7 70 aa12.03□□□□□ -0.48
COPA-202ENST00000368069 STKLD1Q8NE28 680 aa12.03□□□□□ -0.48
COPA-202ENST00000368069 ACO2Q99798 780 aaKnown RBP12.03□□□□□ -0.48
COPA-202ENST00000368069 MRGBPQ9NV56 204 aa12.03□□□□□ -0.48
COPA-202ENST00000368069 COL20A1Q9P218 1284 aa12.03□□□□□ -0.48
COPA-202ENST00000368069 SNX5Q9Y5X3 404 aa12.03□□□□□ -0.48
COPA-202ENST00000368069 SLIT2O94813 1529 aa12.03□□□□□ -0.48
COPA-202ENST00000368069 A0A0B4J269 797 aa12.03□□□□□ -0.48
COPA-202ENST00000368069 KCNK1O00180 336 aa12.03□□□□□ -0.48
COPA-202ENST00000368069 CHADO15335 359 aa12.03□□□□□ -0.48
COPA-202ENST00000368069 MAFO75444 373 aaPredicted RBP12.03□□□□□ -0.48
COPA-202ENST00000368069 ATP6V1B1P15313 513 aa12.03□□□□□ -0.48
COPA-202ENST00000368069 ZNF143P52747 638 aaPredicted RBP12.03□□□□□ -0.48
COPA-202ENST00000368069 BTKQ06187 659 aa12.03□□□□□ -0.48
COPA-202ENST00000368069 ZDHHC17Q8IUH5 632 aa12.03□□□□□ -0.48
COPA-202ENST00000368069 RNPEPL1Q9HAU8 725 aa12.03□□□□□ -0.48
COPA-202ENST00000368069 CYP4F12Q9HCS2 524 aa12.03□□□□□ -0.48
COPA-202ENST00000368069 NOCTQ9UK39 431 aaKnown RBP12.03□□□□□ -0.48
COPA-202ENST00000368069 AAR2Q9Y312 384 aaKnown RBP12.03□□□□□ -0.48
COPA-202ENST00000368069 A0A1W2PPM1 405 aa12.03□□□□□ -0.48
COPA-202ENST00000368069 TMEM191CA6NGB0 347 aa12.03□□□□□ -0.48
COPA-202ENST00000368069 NKRFO15226 690 aaKnown RBP eCLIP12.03□□□□□ -0.48
COPA-202ENST00000368069 FKBP6O75344 327 aa12.03□□□□□ -0.48
COPA-202ENST00000368069 PGAM1P18669 254 aa12.03□□□□□ -0.48
COPA-202ENST00000368069 PTGIRP43119 386 aa12.03□□□□□ -0.48
COPA-202ENST00000368069 NR2C2P49116 596 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms