RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 CDKL2Q92772 493 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 PIWIL1Q96J94 861 aaKnown RBP11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 TSNARE1Q96NA8 513 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 FAM49AQ9H0Q0 323 aaPredicted RBP11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 DEFB129Q9H1M3 183 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 RSAD1Q9HA92 442 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 TAGLN3Q9UI15 199 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 DRG1Q9Y295 367 aaKnown RBP11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 KCNK1O00180 336 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 TCEA3O75764 348 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 RTN3O95197 1032 aaPredicted RBP11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 NFICP08651 508 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 ERVK-10P10266 1014 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 GPD1P21695 349 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 GJC2Q5T442 439 aaPredicted RBP11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 ATF7IP2Q5U623 682 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 CMC1Q7Z7K0 106 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 HPS6Q86YV9 775 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 TRIM42Q8IWZ5 723 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 TMA16Q96EY4 203 aaKnown RBP11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 VCPIP1Q96JH7 1222 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 CDHR1Q96JP9 859 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 DNAJC1Q96KC8 554 aaKnown RBP11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 TWNKQ96RR1 684 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 ACAD9Q9H845 621 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 TMEM165Q9HC07 324 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 ARHGAP28Q9P2N2 729 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 KANSL3Q9P2N6 904 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 MICAL2O94851 1124 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 EDN1P05305 212 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 CSH1P0DML2 217 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 CSH2P0DML3 217 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 AVPR1AP37288 418 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 TGFB2P61812 414 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 TMED1Q13445 227 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 OLIG2Q13516 323 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 WDTC1Q8N5D0 677 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 NAT8LQ8N9F0 302 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 STKLD1Q8NE28 680 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 SNRNP27Q8WVK2 155 aaKnown RBP11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 NLRP7Q8WX94 980 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 NDRG1Q92597 394 aaKnown RBP11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 PPWD1Q96BP3 646 aaKnown RBP11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 PDGFDQ9GZP0 370 aaPredicted RBP11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 EBF3Q9H4W6 596 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 MYOZ2Q9NPC6 264 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 SLC7A8Q9UHI5 535 aa11.42□□□□□ -0.58
NECTIN4-201ENST00000368012 OGTO15294 1046 aa11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 ASS1P00966 412 aaKnown RBP11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 TPH1P17752 444 aa11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 NAMPTP43490 491 aa11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 NUDT2P50583 147 aa11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 GBE1Q04446 702 aa11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 PTPN11Q06124 597 aaPredicted RBP11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 GEN1Q17RS7 908 aa11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 FOXB2Q5VYV0 432 aa11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 BBS12Q6ZW61 710 aa11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 ZNF354CQ86Y25 554 aa11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 CENPKQ9BS16 269 aa11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 C17orf75Q9HAS0 396 aa11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 ATRNL1Q5VV63 1379 aa11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 MYOCOSA0A1B0GUC4 107 aa11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 APOC4-APOC2K7ER74 178 aa11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 ITM2AO43736 263 aa11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 NPTXRO95502 500 aa11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 APOC2P02655 101 aa11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 COPAP53621 1224 aa11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 TCEAL1Q15170 157 aa11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 SPDYE2Q495Y8 402 aa11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 ARHGAP22Q7Z5H3 698 aa11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 KBTBD2Q8IY47 623 aa11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 ICA1LQ8NDH6 482 aa11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 SLC35B2Q8TB61 432 aa11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 COPS5Q92905 334 aa11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 NKD2Q969F2 451 aaPredicted RBP11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 LRGUKQ96M69 825 aa11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 PHF12Q96QT6 1004 aa11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 GORASP1Q9BQQ3 440 aa11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 ADA2Q9NZK5 511 aa11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 PAK5Q9P286 719 aa11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 WDR35Q9P2L0 1181 aa11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 CYTH4Q9UIA0 394 aa11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 LNPEPQ9UIQ6 1025 aa11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 CNTNAP2Q9UHC6 1331 aa11.41□□□□□ -0.58
NECTIN4-201ENST00000368012 LYNP07948 512 aa11.4□□□□□ -0.58
NECTIN4-201ENST00000368012 DLDP09622 509 aaKnown RBP11.4□□□□□ -0.58
NECTIN4-201ENST00000368012 RAG1P15918 1043 aa11.4□□□□□ -0.58
NECTIN4-201ENST00000368012 NDST1P52848 882 aa11.4□□□□□ -0.58
NECTIN4-201ENST00000368012 LAMTOR4Q0VGL1 99 aa11.4□□□□□ -0.58
NECTIN4-201ENST00000368012 CA9Q16790 459 aa11.4□□□□□ -0.58
NECTIN4-201ENST00000368012 FAM160B1Q5W0V3 765 aa11.4□□□□□ -0.58
NECTIN4-201ENST00000368012 ZBTB46Q86UZ6 589 aa11.4□□□□□ -0.58
NECTIN4-201ENST00000368012 MFN1Q8IWA4 741 aa11.4□□□□□ -0.58
NECTIN4-201ENST00000368012 GALNT15Q8N3T1 639 aa11.4□□□□□ -0.58
NECTIN4-201ENST00000368012 SPATA6LQ8N4H0 392 aa11.4□□□□□ -0.58
NECTIN4-201ENST00000368012 MCUQ8NE86 351 aa11.4□□□□□ -0.58
NECTIN4-201ENST00000368012 ZSCAN18Q8TBC5 510 aaPredicted RBP11.4□□□□□ -0.58
NECTIN4-201ENST00000368012 USP33Q8TEY7 942 aa11.4□□□□□ -0.58
NECTIN4-201ENST00000368012 GDPD5Q8WTR4 605 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms