RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 OR6B3Q8NGW1 331 aa12.79□□□□□ -0.36
PTPN7-202ENST00000367279 PCDH19Q8TAB3 1148 aa12.79□□□□□ -0.36
PTPN7-202ENST00000367279 THTPAQ9BU02 230 aa12.79□□□□□ -0.36
PTPN7-202ENST00000367279 SHCBP1LQ9BZQ2 653 aa12.79□□□□□ -0.36
PTPN7-202ENST00000367279 USP29Q9HBJ7 922 aa12.79□□□□□ -0.36
PTPN7-202ENST00000367279 PCDH18Q9HCL0 1135 aa12.79□□□□□ -0.36
PTPN7-202ENST00000367279 PTPRHQ9HD43 1115 aa12.79□□□□□ -0.36
PTPN7-202ENST00000367279 NMRK1Q9NWW6 199 aa12.79□□□□□ -0.36
PTPN7-202ENST00000367279 ZFATQ9P243 1243 aa12.79□□□□□ -0.36
PTPN7-202ENST00000367279 HESX1Q9UBX0 185 aa12.79□□□□□ -0.36
PTPN7-202ENST00000367279 LNPEPQ9UIQ6 1025 aa12.79□□□□□ -0.36
PTPN7-202ENST00000367279 BARX2Q9UMQ3 279 aaPredicted RBP12.79□□□□□ -0.36
PTPN7-202ENST00000367279 TNFSF13BQ9Y275 285 aa12.79□□□□□ -0.36
PTPN7-202ENST00000367279 MEI4A8MW99 385 aa12.79□□□□□ -0.36
PTPN7-202ENST00000367279 SMNDC1O75940 238 aaKnown RBP eCLIP12.79□□□□□ -0.36
PTPN7-202ENST00000367279 METTL18O95568 372 aa12.79□□□□□ -0.36
PTPN7-202ENST00000367279 LMNAP02545 664 aaKnown RBP12.79□□□□□ -0.36
PTPN7-202ENST00000367279 INSRRP14616 1297 aa12.79□□□□□ -0.36
PTPN7-202ENST00000367279 BLMHQ13867 455 aa12.79□□□□□ -0.36
PTPN7-202ENST00000367279 TMEM154Q6P9G4 183 aa12.79□□□□□ -0.36
PTPN7-202ENST00000367279 UNC5AQ6ZN44 842 aa12.79□□□□□ -0.36
PTPN7-202ENST00000367279 EP400NLQ6ZTU2 488 aa12.79□□□□□ -0.36
PTPN7-202ENST00000367279 DENND5BQ6ZUT9 1274 aa12.79□□□□□ -0.36
PTPN7-202ENST00000367279 PPFIBP2Q8ND30 876 aa12.79□□□□□ -0.36
PTPN7-202ENST00000367279 FBXO27Q8NI29 283 aa12.79□□□□□ -0.36
PTPN7-202ENST00000367279 PTCD3Q96EY7 689 aaKnown RBP12.79□□□□□ -0.36
PTPN7-202ENST00000367279 TUBB6Q9BUF5 446 aa12.79□□□□□ -0.36
PTPN7-202ENST00000367279 SMARCAD1Q9H4L7 1026 aa12.79□□□□□ -0.36
PTPN7-202ENST00000367279 PRMT7Q9NVM4 692 aaPredicted RBP12.79□□□□□ -0.36
PTPN7-202ENST00000367279 TRIP11Q15643 1979 aa12.78□□□□□ -0.36
PTPN7-202ENST00000367279 RLFQ13129 1914 aa12.78□□□□□ -0.36
PTPN7-202ENST00000367279 HNRNPCL1O60812 293 aaKnown RBP12.78□□□□□ -0.36
PTPN7-202ENST00000367279 SPAG6O75602 509 aa12.78□□□□□ -0.36
PTPN7-202ENST00000367279 APOEP02649 317 aa12.78□□□□□ -0.36
PTPN7-202ENST00000367279 PDGFRBP09619 1106 aa12.78□□□□□ -0.36
PTPN7-202ENST00000367279 CYP2F1P24903 491 aa12.78□□□□□ -0.36
PTPN7-202ENST00000367279 TAZQ16635 292 aa12.78□□□□□ -0.36
PTPN7-202ENST00000367279 SLC10A6Q3KNW5 377 aa12.78□□□□□ -0.36
PTPN7-202ENST00000367279 CAND1Q86VP6 1230 aaKnown RBP12.78□□□□□ -0.36
PTPN7-202ENST00000367279 SESTD1Q86VW0 696 aa12.78□□□□□ -0.36
PTPN7-202ENST00000367279 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.78□□□□□ -0.36
PTPN7-202ENST00000367279 SKA1Q96BD8 255 aa12.78□□□□□ -0.36
PTPN7-202ENST00000367279 POPDC2Q9HBU9 364 aa12.78□□□□□ -0.36
PTPN7-202ENST00000367279 IL1RAPL1Q9NZN1 696 aa12.78□□□□□ -0.36
PTPN7-202ENST00000367279 PARP14Q460N5 1801 aa12.78□□□□□ -0.36
PTPN7-202ENST00000367279 ARHGAP42A6NI28 874 aa12.78□□□□□ -0.36
PTPN7-202ENST00000367279 HCRTO43612 131 aa12.78□□□□□ -0.36
PTPN7-202ENST00000367279 ATP6V1C1P21283 382 aa12.78□□□□□ -0.36
PTPN7-202ENST00000367279 PROZP22891 400 aa12.78□□□□□ -0.36
PTPN7-202ENST00000367279 VHLP40337 213 aa12.78□□□□□ -0.36
PTPN7-202ENST00000367279 SLC18A2Q05940 514 aa12.78□□□□□ -0.36
PTPN7-202ENST00000367279 NBPF20Q3BBV1 942 aa12.78□□□□□ -0.36
PTPN7-202ENST00000367279 ANO7Q6IWH7 933 aa12.78□□□□□ -0.36
PTPN7-202ENST00000367279 CHSY1Q86X52 802 aa12.78□□□□□ -0.36
PTPN7-202ENST00000367279 PQLC3Q8N755 202 aa12.78□□□□□ -0.36
PTPN7-202ENST00000367279 CLEC4CQ8WTT0 213 aa12.78□□□□□ -0.36
PTPN7-202ENST00000367279 SCG3Q8WXD2 468 aaKnown RBP12.78□□□□□ -0.36
PTPN7-202ENST00000367279 ATXN7L3BQ96GX2 97 aa12.78□□□□□ -0.36
PTPN7-202ENST00000367279 FAXDC2Q96IV6 333 aa12.78□□□□□ -0.36
PTPN7-202ENST00000367279 CLMNQ96JQ2 1002 aa12.78□□□□□ -0.36
PTPN7-202ENST00000367279 TTC1Q99614 292 aa12.78□□□□□ -0.36
PTPN7-202ENST00000367279 PLLPQ9Y342 182 aa12.78□□□□□ -0.36
PTPN7-202ENST00000367279 GAS2O43903 313 aaKnown RBP12.77□□□□□ -0.36
PTPN7-202ENST00000367279 HBP1O60381 514 aa12.77□□□□□ -0.36
PTPN7-202ENST00000367279 USP2O75604 605 aaPredicted RBP12.77□□□□□ -0.36
PTPN7-202ENST00000367279 CIB2O75838 187 aa12.77□□□□□ -0.36
PTPN7-202ENST00000367279 PSMG1O95456 288 aa12.77□□□□□ -0.36
PTPN7-202ENST00000367279 ZNF286BP0CG31 522 aa12.77□□□□□ -0.36
PTPN7-202ENST00000367279 ARF4P18085 180 aaPredicted RBP12.77□□□□□ -0.36
PTPN7-202ENST00000367279 AMPD1P23109 780 aa12.77□□□□□ -0.36
PTPN7-202ENST00000367279 UBAP2LQ14157 1087 aaKnown RBP12.77□□□□□ -0.36
PTPN7-202ENST00000367279 ACAP1Q15027 740 aa12.77□□□□□ -0.36
PTPN7-202ENST00000367279 BOLA3Q53S33 107 aa12.77□□□□□ -0.36
PTPN7-202ENST00000367279 NAIF1Q69YI7 327 aaPredicted RBP12.77□□□□□ -0.36
PTPN7-202ENST00000367279 MRPL45Q9BRJ2 306 aaKnown RBP12.77□□□□□ -0.36
PTPN7-202ENST00000367279 WASF2Q9Y6W5 498 aa12.77□□□□□ -0.36
PTPN7-202ENST00000367279 DPPA5A6NC42 116 aa12.77□□□□□ -0.37
PTPN7-202ENST00000367279 TRAFD1O14545 582 aaPredicted RBP12.77□□□□□ -0.37
PTPN7-202ENST00000367279 IRF6O14896 467 aa12.77□□□□□ -0.37
PTPN7-202ENST00000367279 LYPLA1O75608 230 aaPredicted RBP12.77□□□□□ -0.37
PTPN7-202ENST00000367279 RPL10AP62906 217 aaKnown RBP12.77□□□□□ -0.37
PTPN7-202ENST00000367279 RBP5P82980 135 aa12.77□□□□□ -0.37
PTPN7-202ENST00000367279 STX3Q13277 289 aa12.77□□□□□ -0.37
PTPN7-202ENST00000367279 ZRSR2Q15696 482 aaKnown RBP12.77□□□□□ -0.37
PTPN7-202ENST00000367279 C6orf163Q5TEZ5 329 aa12.77□□□□□ -0.37
PTPN7-202ENST00000367279 HEATR6Q6AI08 1181 aaKnown RBP12.77□□□□□ -0.37
PTPN7-202ENST00000367279 TREML1Q86YW5 311 aa12.77□□□□□ -0.37
PTPN7-202ENST00000367279 EXOC8Q8IYI6 725 aa12.77□□□□□ -0.37
PTPN7-202ENST00000367279 ARHGAP24Q8N264 748 aa12.77□□□□□ -0.37
PTPN7-202ENST00000367279 MMP19Q99542 508 aa12.77□□□□□ -0.37
PTPN7-202ENST00000367279 PDZD7Q9H5P4 517 aa12.77□□□□□ -0.37
PTPN7-202ENST00000367279 DLGAP2Q9P1A6 1054 aa12.77□□□□□ -0.37
PTPN7-202ENST00000367279 MFHAS1Q9Y4C4 1052 aa12.77□□□□□ -0.37
PTPN7-202ENST00000367279 LRRC42Q9Y546 428 aa12.77□□□□□ -0.37
PTPN7-202ENST00000367279 MGAMO43451 1857 aa12.77□□□□□ -0.37
PTPN7-202ENST00000367279 WDR27A2RRH5 827 aa12.77□□□□□ -0.37
PTPN7-202ENST00000367279 SLC15A5A6NIM6 579 aa12.77□□□□□ -0.37
PTPN7-202ENST00000367279 SPECC1L-ADORA2AF8WAN1 911 aa12.77□□□□□ -0.37
PTPN7-202ENST00000367279 DHRS4L1P0CG22 281 aa12.77□□□□□ -0.37
PTPN7-202ENST00000367279 KCNA4P22459 653 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms