RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 CLTBP09497 229 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 GYS1P13807 737 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 PGM1P36871 562 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 LHX1P48742 406 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 BLKP51451 505 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 NCALDP61601 193 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 EFTUD2Q15029 972 aaKnown RBP eCLIP8.89□□□□□ -0.99
SYNE1-206ENST00000367253 NKX1-1Q15270 411 aaPredicted RBP8.89□□□□□ -0.99
SYNE1-206ENST00000367253 PLEKHA7Q6IQ23 1121 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 EPM2AIP1Q7L775 607 aaPredicted RBP8.89□□□□□ -0.99
SYNE1-206ENST00000367253 TAS1R3Q7RTX0 852 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 AGGF1Q8N302 714 aaeCLIP8.89□□□□□ -0.99
SYNE1-206ENST00000367253 AVL9Q8NBF6 648 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 HCAR2Q8TDS4 363 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 UROC1Q96N76 676 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 MON2Q7Z3U7 1717 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 JAK2O60674 1132 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 TOP3BO95985 862 aaKnown RBP8.89□□□□□ -0.99
SYNE1-206ENST00000367253 SELPP16109 830 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 CAP2P40123 477 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 NUP107P57740 925 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 DARS2Q6PI48 645 aaKnown RBP8.89□□□□□ -0.99
SYNE1-206ENST00000367253 SERPINA13PQ6UXR4 307 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 TTC13Q8NBP0 860 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 TBCKQ8TEA7 893 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 KCNB2Q92953 911 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 TADA1Q96BN2 335 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 CEP44Q9C0F1 390 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 SF3B1O75533 1304 aaKnown RBP eCLIP8.89□□□□□ -0.99
SYNE1-206ENST00000367253 ANKRD26Q9UPS8 1709 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 RGS5O15539 181 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 AVILO75366 819 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 CNPP09543 421 aaKnown RBP8.89□□□□□ -0.99
SYNE1-206ENST00000367253 GSPT1P15170 499 aaKnown RBP8.89□□□□□ -0.99
SYNE1-206ENST00000367253 ZNF3P17036 446 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 ADORA2AP29274 412 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 HNF1BP35680 557 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 CLK1P49759 484 aaKnown RBP8.89□□□□□ -0.99
SYNE1-206ENST00000367253 TRIM71Q2Q1W2 868 aaKnown RBP8.89□□□□□ -0.99
SYNE1-206ENST00000367253 ENOSF1Q7L5Y1 443 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 TTC8Q8TAM2 541 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 DEPDC1BQ8WUY9 529 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 PMM1Q92871 262 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 ATG4CQ96DT6 458 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 CNDP2Q96KP4 475 aaKnown RBP8.89□□□□□ -0.99
SYNE1-206ENST00000367253 DCTN4Q9UJW0 460 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 INSL6Q9Y581 213 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 KRT33AO76009 404 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 FTCDO95954 541 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 VDRP11473 427 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 CDH2P19022 906 aaPredicted RBP8.89□□□□□ -0.99
SYNE1-206ENST00000367253 CENPAP49450 140 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 RENBPP51606 427 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 RBL2Q08999 1139 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 ALFQ53S48 1182 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 METTL3Q86U44 580 aaKnown RBP8.89□□□□□ -0.99
SYNE1-206ENST00000367253 CHPFQ8IZ52 775 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 PJA1Q8NG27 643 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 GPKOWQ92917 476 aaPredicted RBP eCLIP8.89□□□□□ -0.99
SYNE1-206ENST00000367253 SH3GLB2Q9NR46 395 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 SETD4Q9NVD3 440 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 RABGEF1Q9UJ41 708 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 STON1Q9Y6Q2 735 aa8.89□□□□□ -0.99
SYNE1-206ENST00000367253 METTL21EPA6NDL7 271 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 SRRM3A6NNA2 597 aaPredicted RBP8.88□□□□□ -0.99
SYNE1-206ENST00000367253 XPO1O14980 1071 aaKnown RBP8.88□□□□□ -0.99
SYNE1-206ENST00000367253 INHAP05111 366 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 PRG2P13727 222 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 ITGB6P18564 788 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 GNL1P36915 607 aaPredicted RBP8.88□□□□□ -0.99
SYNE1-206ENST00000367253 IL12RB1P42701 662 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 OAZ1P54368 228 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 DMC1Q14565 340 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 FAM110CQ1W6H9 321 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 ATP13A5Q4VNC0 1218 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 ESRP1Q6NXG1 681 aaKnown RBP8.88□□□□□ -0.99
SYNE1-206ENST00000367253 UTS2BQ765I0 119 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.88□□□□□ -0.99
SYNE1-206ENST00000367253 ANKRD49Q8WVL7 239 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 CNOT6LQ96LI5 555 aaKnown RBP8.88□□□□□ -0.99
SYNE1-206ENST00000367253 TGS1Q96RS0 853 aaKnown RBP8.88□□□□□ -0.99
SYNE1-206ENST00000367253 MXD3Q9BW11 206 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 C1QTNF1Q9BXJ1 281 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 ARMC7Q9H6L4 198 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 SARS2Q9NP81 518 aaKnown RBP8.88□□□□□ -0.99
SYNE1-206ENST00000367253 CASS4Q9NQ75 786 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 ARHGEF38Q9NXL2 777 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 ZNF624Q9P2J8 865 aaPredicted RBP8.88□□□□□ -0.99
SYNE1-206ENST00000367253 AGAP1Q9UPQ3 857 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 A0A1W2PQ27 194 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 A0A1W2PQ64 194 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 A0A1W2PQD8 194 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 C9J4A7 227 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 ZSCAN9O15535 394 aaPredicted RBP8.88□□□□□ -0.99
SYNE1-206ENST00000367253 KRT36O76013 467 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 FGAP02671 866 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 BDNFP23560 247 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 LRRC24Q50LG9 513 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 RBM12BQ8IXT5 1001 aaKnown RBP8.88□□□□□ -0.99
SYNE1-206ENST00000367253 LZTR1Q8N653 840 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms