RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 IFNB1P01574 187 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 IGFBP4P22692 258 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 LMO2P25791 158 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 RPL9P32969 192 aaKnown RBP11.34□□□□□ -0.59
H3F3A-202ENST00000366814 MLH1P40692 756 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 PTPN9P43378 593 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 LHX1P48742 406 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 PPP2R2AP63151 447 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 ATP11AP98196 1134 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 GPS1Q13098 491 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 SKIDA1Q1XH10 827 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 C15orf59Q2T9L4 293 aaPredicted RBP11.34□□□□□ -0.59
H3F3A-202ENST00000366814 EFHC1Q5JVL4 640 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 HIBCHQ6NVY1 386 aaPredicted RBP11.34□□□□□ -0.59
H3F3A-202ENST00000366814 SLC26A9Q7LBE3 791 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 SCUBE3Q8IX30 993 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 ZCCHC9Q8N567 271 aaKnown RBP11.34□□□□□ -0.59
H3F3A-202ENST00000366814 MAFAQ8NHW3 353 aaPredicted RBP11.34□□□□□ -0.59
H3F3A-202ENST00000366814 PGBD4Q96DM1 585 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 ZFP42Q96MM3 310 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 CFAP57Q96MR6 1250 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 EPB41L4BQ9H329 900 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 CNOT10Q9H9A5 744 aaKnown RBP11.34□□□□□ -0.59
H3F3A-202ENST00000366814 CALCOCO1Q9P1Z2 691 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 NME7Q9Y5B8 376 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 TLDC2A0PJX2 215 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 TULP2O00295 520 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 MDM4O15151 490 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 EIF3HO15372 352 aaKnown RBP eCLIP11.34□□□□□ -0.59
H3F3A-202ENST00000366814 TTC4O95801 387 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 AGTP01019 485 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 FGFR1P11362 822 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 LCP1P13796 627 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 PAX3P23760 479 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 RPL34P49207 117 aaKnown RBP11.34□□□□□ -0.59
H3F3A-202ENST00000366814 IRAK1P51617 712 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 EIF3EP60228 445 aaKnown RBP11.34□□□□□ -0.59
H3F3A-202ENST00000366814 CCDC14Q49A88 953 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 DSTYKQ6XUX3 929 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 TAOK1Q7L7X3 1001 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 RELL1Q8IUW5 271 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 P3H4Q92791 437 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 TTC25Q96NG3 672 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 GAD1Q99259 594 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 HNRNPABQ99729 332 aaKnown RBP11.34□□□□□ -0.59
H3F3A-202ENST00000366814 TMEM121Q9BTD3 319 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 MED10Q9BTT4 135 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 DUSP16Q9BY84 665 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 UBN1Q9NPG3 1134 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 SHOC2Q9UQ13 582 aa11.34□□□□□ -0.59
H3F3A-202ENST00000366814 ARHGEF37A1IGU5 675 aa11.33□□□□□ -0.6
H3F3A-202ENST00000366814 ZNF487B1APH4 448 aa11.33□□□□□ -0.6
H3F3A-202ENST00000366814 ACSL3O95573 720 aa11.33□□□□□ -0.6
H3F3A-202ENST00000366814 SHBGP04278 402 aa11.33□□□□□ -0.6
H3F3A-202ENST00000366814 NPR3P17342 541 aa11.33□□□□□ -0.6
H3F3A-202ENST00000366814 PTPN1P18031 435 aaKnown RBP11.33□□□□□ -0.6
H3F3A-202ENST00000366814 TGM2P21980 687 aa11.33□□□□□ -0.6
H3F3A-202ENST00000366814 CD52P31358 61 aa11.33□□□□□ -0.6
H3F3A-202ENST00000366814 MDH1P40925 334 aaKnown RBP11.33□□□□□ -0.6
H3F3A-202ENST00000366814 MAGOHP61326 146 aaKnown RBP11.33□□□□□ -0.6
H3F3A-202ENST00000366814 ARNTL2Q8WYA1 636 aa11.33□□□□□ -0.6
H3F3A-202ENST00000366814 PIWIL1Q96J94 861 aaKnown RBP11.33□□□□□ -0.6
H3F3A-202ENST00000366814 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.33□□□□□ -0.6
H3F3A-202ENST00000366814 INSL6Q9Y581 213 aa11.33□□□□□ -0.6
H3F3A-202ENST00000366814 SQORQ9Y6N5 450 aa11.33□□□□□ -0.6
H3F3A-202ENST00000366814 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.32□□□□□ -0.6
H3F3A-202ENST00000366814 LCHNA4D1U4 455 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 ARL5CA6NH57 179 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 SRRM3A6NNA2 597 aaPredicted RBP11.32□□□□□ -0.6
H3F3A-202ENST00000366814 ENPP3O14638 875 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 APOL1O14791 398 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 ZNF623O75123 536 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 ENDOD1O94919 500 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 CD48P09326 243 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 STIP1P31948 543 aaKnown RBP11.32□□□□□ -0.6
H3F3A-202ENST00000366814 CHKAP35790 457 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 ROR1Q01973 937 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 DPYSL3Q14195 570 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 CENPUQ71F23 418 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 MRPL10Q7Z7H8 261 aaKnown RBP11.32□□□□□ -0.6
H3F3A-202ENST00000366814 METTL23Q86XA0 190 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 SIX6OS1Q8N1H7 587 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 SPATA18Q8TC71 538 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 PPM1EQ8WY54 764 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 TOP1MTQ969P6 601 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 TLCD1Q96CP7 247 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 SENP8Q96LD8 212 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 SERPINB12Q96P63 405 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 RNF157Q96PX1 679 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 PEBP4Q96S96 227 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 RBM15Q96T37 977 aaKnown RBP eCLIP11.32□□□□□ -0.6
H3F3A-202ENST00000366814 ZNF670Q9BS34 389 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 AGO3Q9H9G7 860 aaKnown RBP11.32□□□□□ -0.6
H3F3A-202ENST00000366814 LRRC4Q9HBW1 653 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 AAASQ9NRG9 546 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 DDX43Q9NXZ2 648 aaKnown RBP11.32□□□□□ -0.6
H3F3A-202ENST00000366814 PADI3Q9ULW8 664 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 CFAP69A5D8W1 941 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 SMIM23A6NLE4 172 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 RFXAPO00287 272 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms