RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 MAGEB3O15480 346 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 GCP02774 474 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 UQCRBP14927 111 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 PRKACAP17612 351 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 TNFRSF8P28908 595 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 TFDP2Q14188 446 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 TRADDQ15628 312 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 SLC18A3Q16572 532 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 SLC35C2Q9NQQ7 365 aa11.38□□□□□ -0.59
CDC42BPA-205ENST00000366769 FOXO6A8MYZ6 492 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 APOL1O14791 398 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 ALDH1A1P00352 501 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 HIST1H2AGP0C0S8 130 aaPredicted RBP11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 CD44P16070 742 aaKnown RBP11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 HIST1H2ADP20671 130 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 RPA3P35244 121 aaPredicted RBP11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 CTC1Q2NKJ3 1217 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 AAGABQ6PD74 315 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 PTPRN2Q92932 1015 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 HIST1H2AHQ96KK5 128 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 HIST1H2AJQ99878 128 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 H2AFJQ9BTM1 129 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 LGR6Q9HBX8 967 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 ZNF624Q9P2J8 865 aaPredicted RBP11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 PPP1R3GB7ZBB8 358 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 BIRC5O15392 142 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 P4HBP07237 508 aaKnown RBP11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 IRF1P10914 325 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 MZF1P28698 734 aaPredicted RBP11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 GPC3P51654 580 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 DNAAF5Q86Y56 855 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 ASLP04424 464 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 ZNF12P17014 697 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 SDC4P31431 198 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 PHKA2P46019 1235 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 RUNDC3AQ59EK9 446 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 GPATCH1Q9BRR8 931 aaKnown RBP11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 MUC3BQ9H195 1237 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 EPS8L2Q9H6S3 715 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 RGS17Q9UGC6 210 aaPredicted RBP11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 TUBGCP4Q9UGJ1 667 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 SPHKAPQ2M3C7 1700 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 C2orf71A6NGG8 1288 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 USP11P51784 963 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 CDH6P55285 790 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 SLC25A3Q00325 362 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 PROM2Q8N271 834 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 SPIRE2Q8WWL2 714 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 SEPHS2Q99611 448 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 SEC16AO15027 2179 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 KDM4BO94953 1096 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 NFICP08651 508 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 TWF1Q12792 350 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 FAPQ12884 760 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 AASDHQ4L235 1098 aaPredicted RBP11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 DPP10Q8N608 796 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 FAM217BQ9NTX9 383 aaPredicted RBP11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 WDR62O43379 1518 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 AREL1O15033 823 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 PGK2P07205 417 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 BCAR1P56945 870 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 TDRD5Q8NAT2 981 aaKnown RBP11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 FLT1P17948 1338 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 IQCMA0A1B0GVH7 501 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 PROCP04070 461 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 GDI2P50395 445 aaKnown RBP11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 CDK16Q00536 496 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 GPATCH4Q5T3I0 446 aaKnown RBP11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 SNX32Q86XE0 403 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 MAB21L3Q8N8X9 362 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 MAGED4Q96JG8 741 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 FAM213AQ9BRX8 229 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 NCKAP5LQ9HCH0 1330 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 ALDH4A1P30038 563 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 DLG4P78352 724 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 QPRTQ15274 297 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 BTBD8Q5XKL5 378 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 RORBQ92753 470 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 S100PBPQ96BU1 408 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 NEUROD4Q9HD90 331 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 STAP1Q9ULZ2 295 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 TNRQ92752 1358 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 DOPEY2Q9Y3R5 2298 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 NPTX2P47972 431 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 PGS1Q32NB8 556 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 TBCELQ5QJ74 424 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 TMEM35BQ8NCS4 154 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 PIGSQ96S52 555 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 PACSIN3Q9UKS6 424 aa11.37□□□□□ -0.59
CDC42BPA-205ENST00000366769 CEP170Q5SW79 1584 aa11.36□□□□□ -0.59
CDC42BPA-205ENST00000366769 LINGO3P0C6S8 592 aa11.36□□□□□ -0.59
CDC42BPA-205ENST00000366769 MMRN1Q13201 1228 aa11.36□□□□□ -0.59
CDC42BPA-205ENST00000366769 RIPK1Q13546 671 aa11.36□□□□□ -0.59
CDC42BPA-205ENST00000366769 LPCAT4Q643R3 524 aa11.36□□□□□ -0.59
CDC42BPA-205ENST00000366769 TMPRSS6Q8IU80 811 aa11.36□□□□□ -0.59
CDC42BPA-205ENST00000366769 SYTL5Q8TDW5 730 aaPredicted RBP11.36□□□□□ -0.59
CDC42BPA-205ENST00000366769 HOXC9P31274 260 aa11.36□□□□□ -0.59
CDC42BPA-205ENST00000366769 ST8SIA6P61647 398 aa11.36□□□□□ -0.59
CDC42BPA-205ENST00000366769 RPL10AP62906 217 aaKnown RBP11.36□□□□□ -0.59
CDC42BPA-205ENST00000366769 PCDH10Q9P2E7 1040 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 189.5 ms