RNA–Protein interactions for RNA: ENST00000365690.4

MIR539-201, microRNA 539, humanhuman

BASIC

Gene MIR539, Length 78 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR539-201ENST00000365690 DDX46Q7L014 1031 aaKnown RBP1.47□□□□□ -2.17
MIR539-201ENST00000365690 TTC7BQ86TV6 843 aa1.47□□□□□ -2.17
MIR539-201ENST00000365690 C16orf71Q8IYS4 520 aaPredicted RBP1.47□□□□□ -2.17
MIR539-201ENST00000365690 SPAG16Q8N0X2 631 aa1.47□□□□□ -2.17
MIR539-201ENST00000365690 CPA6Q8N4T0 437 aa1.47□□□□□ -2.17
MIR539-201ENST00000365690 UBR7Q8N806 425 aa1.47□□□□□ -2.17
MIR539-201ENST00000365690 C12orf76Q8N812 135 aaPredicted RBP1.47□□□□□ -2.17
MIR539-201ENST00000365690 PCSK9Q8NBP7 692 aaKnown RBP1.47□□□□□ -2.17
MIR539-201ENST00000365690 BRIX1Q8TDN6 353 aaKnown RBP1.47□□□□□ -2.17
MIR539-201ENST00000365690 ADAMTS14Q8WXS8 1223 aa1.47□□□□□ -2.17
MIR539-201ENST00000365690 DCLK3Q9C098 648 aa1.47□□□□□ -2.17
MIR539-201ENST00000365690 GBA2Q9HCG7 927 aaPredicted RBP1.47□□□□□ -2.17
MIR539-201ENST00000365690 SNX15Q9NRS6 342 aa1.47□□□□□ -2.17
MIR539-201ENST00000365690 SIRT3Q9NTG7 399 aaPredicted RBP1.47□□□□□ -2.17
MIR539-201ENST00000365690 DONSONQ9NYP3 566 aa1.47□□□□□ -2.17
MIR539-201ENST00000365690 IGSF9Q9P2J2 1179 aa1.47□□□□□ -2.17
MIR539-201ENST00000365690 XPR1Q9UBH6 696 aa1.47□□□□□ -2.17
MIR539-201ENST00000365690 MGAT4CQ9UBM8 478 aa1.47□□□□□ -2.17
MIR539-201ENST00000365690 FZD4Q9ULV1 537 aa1.47□□□□□ -2.17
MIR539-201ENST00000365690 SHOC2Q9UQ13 582 aa1.47□□□□□ -2.17
MIR539-201ENST00000365690 PLAAQ9Y263 795 aa1.47□□□□□ -2.17
MIR539-201ENST00000365690 ADAM18Q9Y3Q7 739 aa1.47□□□□□ -2.17
MIR539-201ENST00000365690 PTGDR2Q9Y5Y4 395 aa1.47□□□□□ -2.17
MIR539-201ENST00000365690 CFAP20Q9Y6A4 193 aaKnown RBP1.47□□□□□ -2.17
MIR539-201ENST00000365690 IGKV6D-41A0A0C4DH26 115 aa1.46□□□□□ -2.18
MIR539-201ENST00000365690 KIR2DS5A0A0G2JLQ3 304 aa1.46□□□□□ -2.18
MIR539-201ENST00000365690 BECN2A8MW95 431 aa1.46□□□□□ -2.18
MIR539-201ENST00000365690 K7ESF4 209 aa1.46□□□□□ -2.18
MIR539-201ENST00000365690 KIR2DS3K7RE56 304 aa1.46□□□□□ -2.18
MIR539-201ENST00000365690 PCDHGA12O60330 932 aa1.46□□□□□ -2.18
MIR539-201ENST00000365690 PRAMEF2O60811 474 aa1.46□□□□□ -2.18
MIR539-201ENST00000365690 IFNA2P01563 188 aa1.46□□□□□ -2.18
MIR539-201ENST00000365690 MBPP02686 304 aaPredicted RBP1.46□□□□□ -2.18
MIR539-201ENST00000365690 GRPP07492 148 aa1.46□□□□□ -2.18
MIR539-201ENST00000365690 F7P08709 466 aaPredicted RBP1.46□□□□□ -2.18
MIR539-201ENST00000365690 KRT5P13647 590 aa1.46□□□□□ -2.18
MIR539-201ENST00000365690 TMPRSS15P98073 1019 aa1.46□□□□□ -2.18
MIR539-201ENST00000365690 TRAF1Q13077 416 aa1.46□□□□□ -2.18
MIR539-201ENST00000365690 DSTYKQ6XUX3 929 aa1.46□□□□□ -2.18
MIR539-201ENST00000365690 RBM44Q6ZP01 1051 aaKnown RBP1.46□□□□□ -2.18
MIR539-201ENST00000365690 CTU1Q7Z7A3 348 aaKnown RBP1.46□□□□□ -2.18
MIR539-201ENST00000365690 CELF5Q8N6W0 485 aaKnown RBP1.46□□□□□ -2.18
MIR539-201ENST00000365690 C3orf20Q8ND61 904 aa1.46□□□□□ -2.18
MIR539-201ENST00000365690 COG1Q8WTW3 980 aa1.46□□□□□ -2.18
MIR539-201ENST00000365690 TMEM174Q8WUU8 243 aa1.46□□□□□ -2.18
MIR539-201ENST00000365690 LPAR1Q92633 364 aa1.46□□□□□ -2.18
MIR539-201ENST00000365690 RTP4Q96DX8 246 aa1.46□□□□□ -2.18
MIR539-201ENST00000365690 DCTN5Q9BTE1 182 aa1.46□□□□□ -2.18
MIR539-201ENST00000365690 WDCPQ9H6R7 721 aa1.46□□□□□ -2.18
MIR539-201ENST00000365690 SCRT2Q9NQ03 307 aa1.46□□□□□ -2.18
MIR539-201ENST00000365690 HIF1ANQ9NWT6 349 aa1.46□□□□□ -2.18
MIR539-201ENST00000365690 ABCF2Q9UG63 623 aa1.46□□□□□ -2.18
MIR539-201ENST00000365690 GAB2Q9UQC2 676 aa1.46□□□□□ -2.18
MIR539-201ENST00000365690 PCDHGA9Q9Y5G4 932 aaKnown RBP1.46□□□□□ -2.18
MIR539-201ENST00000365690 PCDHGA8Q9Y5G5 932 aa1.46□□□□□ -2.18
MIR539-201ENST00000365690 PCDHGA7Q9Y5G6 932 aa1.46□□□□□ -2.18
MIR539-201ENST00000365690 PCDHGA6Q9Y5G7 932 aa1.46□□□□□ -2.18
MIR539-201ENST00000365690 PCDHGA3Q9Y5H0 932 aa1.46□□□□□ -2.18
MIR539-201ENST00000365690 PCDHA1Q9Y5I3 950 aa1.46□□□□□ -2.18
MIR539-201ENST00000365690 PLSCR5A0PG75 271 aa1.45□□□□□ -2.18
MIR539-201ENST00000365690 PSMD9O00233 223 aa1.45□□□□□ -2.18
MIR539-201ENST00000365690 RGS14O43566 566 aa1.45□□□□□ -2.18
MIR539-201ENST00000365690 BUB3O43684 328 aa1.45□□□□□ -2.18
MIR539-201ENST00000365690 EXTL3O43909 919 aa1.45□□□□□ -2.18
MIR539-201ENST00000365690 TMPRSS11DO60235 418 aa1.45□□□□□ -2.18
MIR539-201ENST00000365690 SNRNP70P08621 437 aaKnown RBP1.45□□□□□ -2.18
MIR539-201ENST00000365690 ST6GAL1P15907 406 aa1.45□□□□□ -2.18
MIR539-201ENST00000365690 SLC16A1P53985 500 aa1.45□□□□□ -2.18
MIR539-201ENST00000365690 ROR2Q01974 943 aaKnown RBP1.45□□□□□ -2.18
MIR539-201ENST00000365690 POU3F1Q03052 451 aaPredicted RBP1.45□□□□□ -2.18
MIR539-201ENST00000365690 GRSF1Q12849 480 aaKnown RBP eCLIP1.45□□□□□ -2.18
MIR539-201ENST00000365690 GPS2Q13227 327 aa1.45□□□□□ -2.18
MIR539-201ENST00000365690 NOGQ13253 232 aa1.45□□□□□ -2.18
MIR539-201ENST00000365690 CCDC6Q16204 474 aa1.45□□□□□ -2.18
MIR539-201ENST00000365690 INAVAQ3KP66 663 aa1.45□□□□□ -2.18
MIR539-201ENST00000365690 EMC10Q5UCC4 262 aa1.45□□□□□ -2.18
MIR539-201ENST00000365690 PLEKHA7Q6IQ23 1121 aa1.45□□□□□ -2.18
MIR539-201ENST00000365690 HEATR3Q7Z4Q2 680 aa1.45□□□□□ -2.18
MIR539-201ENST00000365690 KIAA0907Q7Z7F0 614 aaPredicted RBP1.45□□□□□ -2.18
MIR539-201ENST00000365690 KLHDC8BQ8IXV7 354 aa1.45□□□□□ -2.18
MIR539-201ENST00000365690 APPBP2Q92624 585 aa1.45□□□□□ -2.18
MIR539-201ENST00000365690 MRFAP1L1Q96HT8 127 aa1.45□□□□□ -2.18
MIR539-201ENST00000365690 DNAJC2Q99543 621 aaKnown RBP1.45□□□□□ -2.18
MIR539-201ENST00000365690 PLAC1Q9HBJ0 212 aa1.45□□□□□ -2.18
MIR539-201ENST00000365690 PLEKHM1Q9Y4G2 1056 aa1.45□□□□□ -2.18
MIR539-201ENST00000365690 LOC102724159A0A0B4J2E5 919 aa1.44□□□□□ -2.18
MIR539-201ENST00000365690 RTL8CO15255 209 aa1.44□□□□□ -2.18
MIR539-201ENST00000365690 PRPF4O43172 522 aaKnown RBP eCLIP1.44□□□□□ -2.18
MIR539-201ENST00000365690 KCNQ3O43525 872 aa1.44□□□□□ -2.18
MIR539-201ENST00000365690 LCATP04180 440 aa1.44□□□□□ -2.18
MIR539-201ENST00000365690 WNT1P04628 370 aa1.44□□□□□ -2.18
MIR539-201ENST00000365690 FCGR1AP12314 374 aa1.44□□□□□ -2.18
MIR539-201ENST00000365690 TYRP14679 529 aa1.44□□□□□ -2.18
MIR539-201ENST00000365690 CPA1P15085 419 aa1.44□□□□□ -2.18
MIR539-201ENST00000365690 BCAT1P54687 386 aa1.44□□□□□ -2.18
MIR539-201ENST00000365690 SLC12A2P55011 1212 aa1.44□□□□□ -2.18
MIR539-201ENST00000365690 UCP3P55916 312 aa1.44□□□□□ -2.18
MIR539-201ENST00000365690 TIRAPP58753 221 aa1.44□□□□□ -2.18
MIR539-201ENST00000365690 ERVK11-1P61568 191 aa1.44□□□□□ -2.18
MIR539-201ENST00000365690 SEC61A1P61619 476 aaKnown RBP1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms