RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 RAB11FIP4Q86YS3 637 aa5.9□□□□□ -1.46
RNU4-4P-201ENST00000364588 ZNF808Q8N4W9 903 aaPredicted RBP5.9□□□□□ -1.46
RNU4-4P-201ENST00000364588 NCOA7Q8NI08 942 aa5.9□□□□□ -1.46
RNU4-4P-201ENST00000364588 CHAC2Q8WUX2 184 aa5.9□□□□□ -1.46
RNU4-4P-201ENST00000364588 RUFY2Q8WXA3 655 aa5.9□□□□□ -1.46
RNU4-4P-201ENST00000364588 CUL5Q93034 780 aa5.9□□□□□ -1.46
RNU4-4P-201ENST00000364588 CAAP1Q9H8G2 361 aa5.9□□□□□ -1.46
RNU4-4P-201ENST00000364588 TLR9Q9NR96 1032 aa5.9□□□□□ -1.46
RNU4-4P-201ENST00000364588 KCNG1Q9UIX4 513 aa5.9□□□□□ -1.46
RNU4-4P-201ENST00000364588 ZNF215Q9UL58 517 aaPredicted RBP5.9□□□□□ -1.46
RNU4-4P-201ENST00000364588 FRMPD4Q14CM0 1322 aa5.9□□□□□ -1.47
RNU4-4P-201ENST00000364588 BDP1A6H8Y1 2624 aa5.9□□□□□ -1.47
RNU4-4P-201ENST00000364588 MYO7AQ13402 2215 aa5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 hCG_1642624A0A1W2PR95 340 aa5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 CAPN14A8MX76 684 aa5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 PI4K2BG5E9Z4 385 aa5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 H3BNC9 293 aa5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 MEIS2O14770 477 aa5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 ATP9AO75110 1047 aa5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 CAND2O75155 1236 aa5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 STAM2O75886 525 aa5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 PLEKHA8P1O95397 391 aa5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 CHRNA1P02708 482 aa5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 TACR2P21452 398 aa5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 TCF7P36402 384 aaPredicted RBP5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 IGBP1P78318 339 aa5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 ADAM8P78325 824 aa5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 PPFIA1Q13136 1202 aa5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 CLUL1Q15846 466 aa5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 UBE2SQ16763 222 aa5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 CT47A1Q5JQC4 288 aaPredicted RBP5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 GLB1L2Q8IW92 636 aa5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 MB21D2Q8IYB1 491 aaPredicted RBP5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 SRBD1Q8N5C6 995 aaKnown RBP5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 CTCFLQ8NI51 663 aaPredicted RBP5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 NEK9Q8TD19 979 aa5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 APBB2Q92870 758 aa5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 ZBTB10Q96DT7 871 aa5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 RRP36Q96EU6 259 aaKnown RBP5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 IL17RAQ96F46 866 aa5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 TMEM176AQ96HP8 235 aa5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 RPL10LQ96L21 214 aaKnown RBP5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 GPHA2Q96T91 129 aa5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 TCF25Q9BQ70 676 aa5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 SPZ1Q9BXG8 430 aa5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 VPS11Q9H270 941 aa5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 AGO3Q9H9G7 860 aaKnown RBP5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 LY9Q9HBG7 655 aa5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 SEC63Q9UGP8 760 aaKnown RBP5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 GIT1Q9Y2X7 761 aa5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 KIAA1671Q9BY89 1806 aa5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 C5orf42Q9H799 3197 aa5.89□□□□□ -1.47
RNU4-4P-201ENST00000364588 COL4A6Q14031 1691 aa5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 TTC3P53804 2025 aa5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 GSTTP1A0A1W2PQM5 241 aa5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 GRM6O15303 877 aa5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 PRC1O43663 620 aa5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 SEC24DO94855 1032 aaPredicted RBP5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 HNRNPLP14866 589 aaKnown RBP eCLIP5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 KCNA2P16389 499 aa5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 CPEP16870 476 aa5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 IBSPP21815 317 aaPredicted RBP5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 KIF5BP33176 963 aa5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 KIR2DL3P43628 341 aa5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 MANFP55145 182 aaKnown RBP5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 SESN3P58005 492 aa5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 IRX6P78412 446 aaPredicted RBP5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 ZXDAP98168 799 aa5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 LPIN1Q14693 890 aa5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 BROXQ5VW32 411 aa5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 CASC1Q6TDU7 716 aa5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 Q6ZSN1 163 aa5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 GAREM2Q75VX8 874 aa5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 RPAINQ86UA6 219 aa5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 SGMS1Q86VZ5 419 aa5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 RASSF3Q86WH2 238 aa5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 PPP1R14CQ8TAE6 165 aa5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 DNAJB3Q8WWF6 145 aa5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 SEPT1Q8WYJ6 367 aa5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 GLG1Q92896 1179 aa5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 MAP4K1Q92918 833 aa5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 PABPC5Q96DU9 382 aaKnown RBP5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 SENP7Q9BQF6 1050 aa5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 LRRC2Q9BYS8 371 aa5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 FAM49AQ9H0Q0 323 aaPredicted RBP5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 PSTPIP2Q9H939 334 aa5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 TUBE1Q9UJT0 475 aa5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 NOC2LQ9Y3T9 749 aaKnown RBP5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 PRKAB1Q9Y478 270 aa5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 CDY2AQ9Y6F7 541 aa5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 NUMBLQ9Y6R0 609 aa5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 ADGRA3Q8IWK6 1321 aa5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 NRCAMQ92823 1304 aa5.88□□□□□ -1.47
RNU4-4P-201ENST00000364588 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.87□□□□□ -1.47
RNU4-4P-201ENST00000364588 CCDC69A6NI79 296 aa5.87□□□□□ -1.47
RNU4-4P-201ENST00000364588 C5orf67F2Z3F1 127 aa5.87□□□□□ -1.47
RNU4-4P-201ENST00000364588 SH2B2O14492 632 aaPredicted RBP5.87□□□□□ -1.47
RNU4-4P-201ENST00000364588 BRINP1O60477 761 aa5.87□□□□□ -1.47
RNU4-4P-201ENST00000364588 IPO13O94829 963 aaKnown RBP5.87□□□□□ -1.47
RNU4-4P-201ENST00000364588 LINC00271P0C7V0 271 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms