RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 DVL3Q92997 716 aaPredicted RBP4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 WDYHV1Q96HA8 205 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 COG8Q96MW5 612 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 C8orf49Q96NF6 230 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 TWNKQ96RR1 684 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 SEC62Q99442 399 aaKnown RBP4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 ALG8Q9BVK2 526 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 C1QTNF3Q9BXJ4 246 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 BRD8Q9H0E9 1235 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 UNC45AQ9H3U1 944 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 ABHD16BQ9H3Z7 469 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 KCNK9Q9NPC2 374 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 VPS45Q9NRW7 570 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 KLC4Q9NSK0 619 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 TMEM160Q9NX00 188 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 KCTD5Q9NXV2 234 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 IFT80Q9P2H3 777 aaPredicted RBP4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 PI4KBQ9UBF8 816 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 ZBTB1Q9Y2K1 713 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 PIPSLA2A3N6 862 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 FAM90A20PA6NIJ5 464 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 VWC2LB2RUY7 222 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 KIF28PB7ZC32 967 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 PMPCBO75439 489 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 TJP3O95049 919 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 RHOP08100 348 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 SERPINA4P29622 427 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 GKP32189 559 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 MAGEA10P43363 369 aaPredicted RBP4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 GSTM5P46439 218 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 CCR5P51681 352 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 MPP1Q00013 466 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 UBE3AQ05086 875 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 CHRNDQ07001 517 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 SF3A3Q12874 501 aaKnown RBP eCLIP4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 EIF2B5Q13144 721 aaKnown RBP4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 G3BP1Q13283 466 aaKnown RBP eCLIP4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 RPS6KA2Q15349 733 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 CDSNQ15517 529 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 TBRG1Q3YBR2 411 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 NRN1LQ496H8 165 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 FBLN7Q53RD9 439 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 TREML2Q5T2D2 321 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 MAP3K21Q5TCX8 1036 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 ERICH6BQ5W0A0 696 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 KIAA0895LQ68EN5 471 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 DGAT2L7PQ6IED9 249 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 GRHL2Q6ISB3 625 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 CLEC4GQ6UXB4 293 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 RASGRP2Q7LDG7 609 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 TMEM57Q8N5G2 664 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 TOR1AIP2Q8NFQ8 470 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 SLC22A17Q8WUG5 538 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 CACTINQ8WUQ7 758 aaKnown RBP4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 HMGB4Q8WW32 186 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 ASB10Q8WXI3 467 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 SKA1Q96BD8 255 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 R3HDM4Q96D70 268 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 MCRS1Q96EZ8 462 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 KRTAP3-1Q9BYR8 98 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 UBN1Q9NPG3 1134 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 TMLHEQ9NVH6 421 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 SMPD4Q9NXE4 827 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 EHD3Q9NZN3 535 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 DERAQ9Y315 318 aa4.26□□□□□ -1.73
RNU6-28P-201ENST00000362378 SLC38A8A6NNN8 435 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 YY2O15391 372 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 MPPED1O15442 326 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 SPRY2O43597 315 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 KRT38O76015 456 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 RHOBTB3O94955 611 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 NXPH3O95157 252 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 FESP07332 822 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 CYP21A2P08686 494 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 XBP1P17861 261 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 RXRAP19793 462 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 TNFAIP3P21580 790 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 DRD1P21728 446 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 MMP8P22894 467 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 MCM5P33992 734 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 FOLR3P41439 243 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 SEMA3BQ13214 749 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 TRPC3Q13507 836 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 SLC12A1Q13621 1099 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 AAK1Q2M2I8 961 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 ABHD17BQ5VST6 288 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 RNF207Q6ZRF8 634 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 SYT13Q7L8C5 426 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 PCGF5Q86SE9 256 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 PALM2Q8IXS6 379 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 USP38Q8NB14 1042 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 HTRA1Q92743 480 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 GOLGA1Q92805 767 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 HAS1Q92839 578 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 RFKQ969G6 155 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 VPS50Q96JG6 964 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 PBKQ96KB5 322 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 MECRQ9BV79 373 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 ZHX3Q9H4I2 956 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 SERHL2Q9H4I8 314 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms