RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 RIOK3O14730 519 aaKnown RBP18.8■□□□□ 0.6
CCDC7-203ENST00000362006 AIF1P55008 147 aa18.8■□□□□ 0.6
CCDC7-203ENST00000362006 TWF1Q12792 350 aa18.8■□□□□ 0.6
CCDC7-203ENST00000362006 MTMR3Q13615 1198 aa18.8■□□□□ 0.6
CCDC7-203ENST00000362006 SCYL2Q6P3W7 929 aa18.8■□□□□ 0.6
CCDC7-203ENST00000362006 ZNF572Q7Z3I7 529 aaPredicted RBP18.8■□□□□ 0.6
CCDC7-203ENST00000362006 SPRED2Q7Z698 418 aa18.8■□□□□ 0.6
CCDC7-203ENST00000362006 PSTKQ8IV42 348 aaKnown RBP18.8■□□□□ 0.6
CCDC7-203ENST00000362006 HDAC7Q8WUI4 952 aa18.8■□□□□ 0.6
CCDC7-203ENST00000362006 PLEKHA4Q9H4M7 779 aa18.8■□□□□ 0.6
CCDC7-203ENST00000362006 ZWILCHQ9H900 591 aa18.8■□□□□ 0.6
CCDC7-203ENST00000362006 GMIPQ9P107 970 aa18.8■□□□□ 0.6
CCDC7-203ENST00000362006 PCSK1NQ9UHG2 260 aa18.8■□□□□ 0.6
CCDC7-203ENST00000362006 ZDHHC11BP0C7U3 371 aa18.8■□□□□ 0.6
CCDC7-203ENST00000362006 PYGMP11217 842 aa18.8■□□□□ 0.6
CCDC7-203ENST00000362006 TCF4P15884 667 aa18.8■□□□□ 0.6
CCDC7-203ENST00000362006 TUBB4BP68371 445 aa18.8■□□□□ 0.6
CCDC7-203ENST00000362006 ITIH3Q06033 890 aa18.8■□□□□ 0.6
CCDC7-203ENST00000362006 MSANTD2Q6P1R3 559 aa18.8■□□□□ 0.6
CCDC7-203ENST00000362006 TADA2BQ86TJ2 420 aa18.8■□□□□ 0.6
CCDC7-203ENST00000362006 CMASQ8NFW8 434 aaPredicted RBP18.8■□□□□ 0.6
CCDC7-203ENST00000362006 PSMG2Q969U7 264 aa18.8■□□□□ 0.6
CCDC7-203ENST00000362006 CARD6Q9BX69 1037 aa18.8■□□□□ 0.6
CCDC7-203ENST00000362006 NMUR1Q9HB89 426 aa18.8■□□□□ 0.6
CCDC7-203ENST00000362006 MAGED2Q9UNF1 606 aaPredicted RBP18.8■□□□□ 0.6
CCDC7-203ENST00000362006 CTAGE15A4D2H0 777 aa18.79■□□□□ 0.6
CCDC7-203ENST00000362006 MDM4O15151 490 aa18.79■□□□□ 0.6
CCDC7-203ENST00000362006 LRG1P02750 347 aa18.79■□□□□ 0.6
CCDC7-203ENST00000362006 KRT1P04264 644 aa18.79■□□□□ 0.6
CCDC7-203ENST00000362006 CTAGE8P0CG41 777 aa18.79■□□□□ 0.6
CCDC7-203ENST00000362006 HMGA1P17096 107 aaKnown RBP18.79■□□□□ 0.6
CCDC7-203ENST00000362006 TFE3P19532 575 aaPredicted RBP18.79■□□□□ 0.6
CCDC7-203ENST00000362006 IL1R2P27930 398 aa18.79■□□□□ 0.6
CCDC7-203ENST00000362006 GJC1P36383 396 aa18.79■□□□□ 0.6
CCDC7-203ENST00000362006 CLCN4P51793 760 aa18.79■□□□□ 0.6
CCDC7-203ENST00000362006 ERMARDQ5T6L9 678 aa18.79■□□□□ 0.6
CCDC7-203ENST00000362006 SNX30Q5VWJ9 437 aa18.79■□□□□ 0.6
CCDC7-203ENST00000362006 ELMSAN1Q6PJG2 1045 aa18.79■□□□□ 0.6
CCDC7-203ENST00000362006 CTAGE6Q86UF2 777 aa18.79■□□□□ 0.6
CCDC7-203ENST00000362006 CTAGE4Q8IX94 777 aa18.79■□□□□ 0.6
CCDC7-203ENST00000362006 STKLD1Q8NE28 680 aa18.79■□□□□ 0.6
CCDC7-203ENST00000362006 MAIP1Q8WWC4 291 aa18.79■□□□□ 0.6
CCDC7-203ENST00000362006 SMOC2Q9H3U7 446 aa18.79■□□□□ 0.6
CCDC7-203ENST00000362006 FAM204AQ9H8W3 233 aa18.79■□□□□ 0.6
CCDC7-203ENST00000362006 RARAP10276 462 aa18.79■□□□□ 0.6
CCDC7-203ENST00000362006 SMAD3P84022 425 aaKnown RBP18.79■□□□□ 0.6
CCDC7-203ENST00000362006 RSRC2Q7L4I2 434 aaKnown RBP18.79■□□□□ 0.6
CCDC7-203ENST00000362006 MAP7D3Q8IWC1 876 aa18.79■□□□□ 0.6
CCDC7-203ENST00000362006 ELMOD1Q8N336 334 aa18.79■□□□□ 0.6
CCDC7-203ENST00000362006 DQX1Q8TE96 717 aaKnown RBP18.79■□□□□ 0.6
CCDC7-203ENST00000362006 MS4A14Q96JA4 679 aa18.79■□□□□ 0.6
CCDC7-203ENST00000362006 DDIT4Q9NX09 232 aa18.79■□□□□ 0.6
CCDC7-203ENST00000362006 IRS1P35568 1242 aa18.78■□□□□ 0.6
CCDC7-203ENST00000362006 ZNF211Q13398 564 aaPredicted RBP18.78■□□□□ 0.6
CCDC7-203ENST00000362006 PDK2Q15119 407 aa18.78■□□□□ 0.6
CCDC7-203ENST00000362006 OTUD1Q5VV17 481 aaPredicted RBP18.78■□□□□ 0.6
CCDC7-203ENST00000362006 DNAJB7Q7Z6W7 309 aaPredicted RBP18.78■□□□□ 0.6
CCDC7-203ENST00000362006 VSIG1Q86XK7 387 aa18.78■□□□□ 0.6
CCDC7-203ENST00000362006 CCDC50Q8IVM0 306 aa18.78■□□□□ 0.6
CCDC7-203ENST00000362006 KCTD6Q8NC69 237 aa18.78■□□□□ 0.6
CCDC7-203ENST00000362006 SERPINB11Q96P15 392 aa18.78■□□□□ 0.6
CCDC7-203ENST00000362006 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.78■□□□□ 0.6
CCDC7-203ENST00000362006 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.78■□□□□ 0.6
CCDC7-203ENST00000362006 TRPM5Q9NZQ8 1165 aa18.78■□□□□ 0.6
CCDC7-203ENST00000362006 IGLV3-25P01717 112 aa18.77■□□□□ 0.6
CCDC7-203ENST00000362006 FGGP02679 453 aa18.77■□□□□ 0.6
CCDC7-203ENST00000362006 C8AP07357 584 aa18.77■□□□□ 0.6
CCDC7-203ENST00000362006 SPATA31D3P0C874 917 aa18.77■□□□□ 0.6
CCDC7-203ENST00000362006 RARGP13631 454 aa18.77■□□□□ 0.6
CCDC7-203ENST00000362006 PTPN7P35236 360 aa18.77■□□□□ 0.6
CCDC7-203ENST00000362006 NME3Q13232 169 aa18.77■□□□□ 0.6
CCDC7-203ENST00000362006 LONRF2Q1L5Z9 754 aa18.77■□□□□ 0.6
CCDC7-203ENST00000362006 ARL13BQ3SXY8 428 aa18.77■□□□□ 0.6
CCDC7-203ENST00000362006 ATP13A4Q4VNC1 1196 aa18.77■□□□□ 0.6
CCDC7-203ENST00000362006 PABPC1LQ4VXU2 614 aaKnown RBP18.77■□□□□ 0.6
CCDC7-203ENST00000362006 TXNRD3NBQ6F5E7 133 aa18.77■□□□□ 0.6
CCDC7-203ENST00000362006 SPATA31D4Q6ZUB0 917 aa18.77■□□□□ 0.6
CCDC7-203ENST00000362006 ARNTL2Q8WYA1 636 aa18.77■□□□□ 0.6
CCDC7-203ENST00000362006 NTAN1Q96AB6 310 aa18.77■□□□□ 0.6
CCDC7-203ENST00000362006 ZNF512Q96ME7 567 aaPredicted RBP18.77■□□□□ 0.6
CCDC7-203ENST00000362006 PEBP4Q96S96 227 aa18.77■□□□□ 0.6
CCDC7-203ENST00000362006 ADAM33Q9BZ11 813 aa18.77■□□□□ 0.6
CCDC7-203ENST00000362006 EFR3BQ9Y2G0 817 aa18.77■□□□□ 0.6
CCDC7-203ENST00000362006 LRRD1A4D1F6 860 aa18.77■□□□□ 0.6
CCDC7-203ENST00000362006 CLASP2O75122 1294 aaKnown RBP18.77■□□□□ 0.6
CCDC7-203ENST00000362006 KDELR1P24390 212 aa18.77■□□□□ 0.6
CCDC7-203ENST00000362006 CXCR3P49682 368 aa18.77■□□□□ 0.6
CCDC7-203ENST00000362006 PITX1P78337 314 aaPredicted RBP18.77■□□□□ 0.6
CCDC7-203ENST00000362006 NNTQ13423 1086 aa18.77■□□□□ 0.6
CCDC7-203ENST00000362006 PPP2R5EQ16537 467 aa18.77■□□□□ 0.6
CCDC7-203ENST00000362006 CYP4V2Q6ZWL3 525 aaPredicted RBP18.77■□□□□ 0.6
CCDC7-203ENST00000362006 TAC4Q86UU9 113 aa18.77■□□□□ 0.6
CCDC7-203ENST00000362006 SLC13A5Q86YT5 568 aaPredicted RBP18.77■□□□□ 0.6
CCDC7-203ENST00000362006 PIGVQ9NUD9 493 aa18.77■□□□□ 0.6
CCDC7-203ENST00000362006 OSER1Q9NX31 292 aa18.77■□□□□ 0.6
CCDC7-203ENST00000362006 PDE2AO00408 941 aaPredicted RBP18.76■□□□□ 0.59
CCDC7-203ENST00000362006 EIF4EBP2Q13542 120 aaPredicted RBP18.76■□□□□ 0.59
CCDC7-203ENST00000362006 SMTNL2Q2TAL5 461 aa18.76■□□□□ 0.59
CCDC7-203ENST00000362006 RAB6CQ53S08 254 aa18.76■□□□□ 0.59
CCDC7-203ENST00000362006 TFDP3Q5H9I0 405 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms