RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 RFX8Q6ZV50 586 aa19.74■□□□□ 0.75
CMTM3-201ENST00000361909 DPP9Q86TI2 863 aa19.74■□□□□ 0.75
CMTM3-201ENST00000361909 IFNL1Q8IU54 200 aa19.74■□□□□ 0.75
CMTM3-201ENST00000361909 MARVELD2Q8N4S9 558 aa19.74■□□□□ 0.75
CMTM3-201ENST00000361909 NLRP4Q96MN2 994 aa19.74■□□□□ 0.75
CMTM3-201ENST00000361909 PCYT2Q99447 389 aa19.74■□□□□ 0.75
CMTM3-201ENST00000361909 NTPCRQ9BSD7 190 aaKnown RBP19.74■□□□□ 0.75
CMTM3-201ENST00000361909 NRBP2Q9NSY0 501 aa19.74■□□□□ 0.75
CMTM3-201ENST00000361909 ZNF180Q9UJW8 692 aa19.74■□□□□ 0.75
CMTM3-201ENST00000361909 A6NJR5 290 aa19.74■□□□□ 0.75
CMTM3-201ENST00000361909 LGR5O75473 907 aa19.74■□□□□ 0.75
CMTM3-201ENST00000361909 TXNP10599 105 aaKnown RBP19.74■□□□□ 0.75
CMTM3-201ENST00000361909 TCF7P36402 384 aaPredicted RBP19.74■□□□□ 0.75
CMTM3-201ENST00000361909 CPOXP36551 454 aa19.74■□□□□ 0.75
CMTM3-201ENST00000361909 TAP1Q03518 808 aa19.74■□□□□ 0.75
CMTM3-201ENST00000361909 KDSRQ06136 332 aa19.74■□□□□ 0.75
CMTM3-201ENST00000361909 BTKQ06187 659 aa19.74■□□□□ 0.75
CMTM3-201ENST00000361909 CYP24A1Q07973 514 aa19.74■□□□□ 0.75
CMTM3-201ENST00000361909 TAF1CQ15572 869 aaPredicted RBP19.74■□□□□ 0.75
CMTM3-201ENST00000361909 FNBP1LQ5T0N5 605 aa19.74■□□□□ 0.75
CMTM3-201ENST00000361909 TTC39BQ5VTQ0 682 aaPredicted RBP19.74■□□□□ 0.75
CMTM3-201ENST00000361909 SV2AQ7L0J3 742 aa19.74■□□□□ 0.75
CMTM3-201ENST00000361909 PASD1Q8IV76 773 aa19.74■□□□□ 0.75
CMTM3-201ENST00000361909 ZSWIM2Q8NEG5 633 aa19.74■□□□□ 0.75
CMTM3-201ENST00000361909 E2F7Q96AV8 911 aa19.74■□□□□ 0.75
CMTM3-201ENST00000361909 SERAC1Q96JX3 654 aa19.74■□□□□ 0.75
CMTM3-201ENST00000361909 KLF6Q99612 283 aaPredicted RBP19.74■□□□□ 0.75
CMTM3-201ENST00000361909 GPR20Q99678 358 aa19.74■□□□□ 0.75
CMTM3-201ENST00000361909 SH2D3AQ9BRG2 576 aa19.74■□□□□ 0.75
CMTM3-201ENST00000361909 FAM96AQ9H5X1 160 aa19.74■□□□□ 0.75
CMTM3-201ENST00000361909 PNPLA8Q9NP80 782 aa19.74■□□□□ 0.75
CMTM3-201ENST00000361909 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.74■□□□□ 0.75
CMTM3-201ENST00000361909 THEGQ9P2T0 379 aa19.74■□□□□ 0.75
CMTM3-201ENST00000361909 GOLGA8IPA6NC78 632 aa19.73■□□□□ 0.75
CMTM3-201ENST00000361909 GOLGA8JA6NMD2 632 aa19.73■□□□□ 0.75
CMTM3-201ENST00000361909 IFNB1P01574 187 aa19.73■□□□□ 0.75
CMTM3-201ENST00000361909 SREBF2Q12772 1141 aa19.73■□□□□ 0.75
CMTM3-201ENST00000361909 MSLNQ13421 630 aaPredicted RBP19.73■□□□□ 0.75
CMTM3-201ENST00000361909 SFT2D3Q587I9 215 aa19.73■□□□□ 0.75
CMTM3-201ENST00000361909 ZFYVE27Q5T4F4 411 aa19.73■□□□□ 0.75
CMTM3-201ENST00000361909 FAM102BQ5T8I3 360 aa19.73■□□□□ 0.75
CMTM3-201ENST00000361909 SATL1Q86VE3 508 aa19.73■□□□□ 0.75
CMTM3-201ENST00000361909 FBXO27Q8NI29 283 aa19.73■□□□□ 0.75
CMTM3-201ENST00000361909 SPIRE2Q8WWL2 714 aa19.73■□□□□ 0.75
CMTM3-201ENST00000361909 FAM167AQ96KS9 214 aa19.73■□□□□ 0.75
CMTM3-201ENST00000361909 SRPK1Q96SB4 655 aaKnown RBP19.73■□□□□ 0.75
CMTM3-201ENST00000361909 ZNF510Q9Y2H8 683 aa19.73■□□□□ 0.75
CMTM3-201ENST00000361909 FAM155AB1AL88 458 aaPredicted RBP19.73■□□□□ 0.75
CMTM3-201ENST00000361909 BIRC5O15392 142 aa19.73■□□□□ 0.75
CMTM3-201ENST00000361909 DENRO43583 198 aaKnown RBP19.73■□□□□ 0.75
CMTM3-201ENST00000361909 KLHL2O95198 593 aa19.73■□□□□ 0.75
CMTM3-201ENST00000361909 CCNFP41002 786 aa19.73■□□□□ 0.75
CMTM3-201ENST00000361909 CDKN2BP42772 138 aa19.73■□□□□ 0.75
CMTM3-201ENST00000361909 USP4Q13107 963 aa19.73■□□□□ 0.75
CMTM3-201ENST00000361909 CYLC2Q14093 348 aaPredicted RBP19.73■□□□□ 0.75
CMTM3-201ENST00000361909 TEX44Q53QW1 395 aa19.73■□□□□ 0.75
CMTM3-201ENST00000361909 LGSNQ5TDP6 509 aa19.73■□□□□ 0.75
CMTM3-201ENST00000361909 TAPT1Q6NXT6 567 aa19.73■□□□□ 0.75
CMTM3-201ENST00000361909 PLPPR4Q7Z2D5 763 aa19.73■□□□□ 0.75
CMTM3-201ENST00000361909 TRMT1LQ7Z2T5 733 aaKnown RBP19.73■□□□□ 0.75
CMTM3-201ENST00000361909 POLNQ7Z5Q5 900 aa19.73■□□□□ 0.75
CMTM3-201ENST00000361909 ARID3BQ8IVW6 561 aaPredicted RBP19.73■□□□□ 0.75
CMTM3-201ENST00000361909 ICA1LQ8NDH6 482 aa19.73■□□□□ 0.75
CMTM3-201ENST00000361909 GDPD5Q8WTR4 605 aa19.73■□□□□ 0.75
CMTM3-201ENST00000361909 HAUS1Q96CS2 278 aa19.73■□□□□ 0.75
CMTM3-201ENST00000361909 CLPTM1LQ96KA5 538 aa19.73■□□□□ 0.75
CMTM3-201ENST00000361909 WDR83Q9BRX9 315 aaKnown RBP19.73■□□□□ 0.75
CMTM3-201ENST00000361909 TMEM121Q9BTD3 319 aa19.73■□□□□ 0.75
CMTM3-201ENST00000361909 MRPS26Q9BYN8 205 aaKnown RBP19.73■□□□□ 0.75
CMTM3-201ENST00000361909 ADAM33Q9BZ11 813 aa19.73■□□□□ 0.75
CMTM3-201ENST00000361909 C12orf65Q9H3J6 166 aaKnown RBP19.73■□□□□ 0.75
CMTM3-201ENST00000361909 ITGA11Q9UKX5 1188 aa19.73■□□□□ 0.75
CMTM3-201ENST00000361909 DMTF1Q9Y222 760 aa19.73■□□□□ 0.75
CMTM3-201ENST00000361909 HBS1LQ9Y450 684 aaKnown RBP19.73■□□□□ 0.75
CMTM3-201ENST00000361909 C15orf38-AP3S2A0A0A6YYH1 394 aa19.72■□□□□ 0.75
CMTM3-201ENST00000361909 C2orf71A6NGG8 1288 aa19.72■□□□□ 0.75
CMTM3-201ENST00000361909 E5RJQ4 531 aa19.72■□□□□ 0.75
CMTM3-201ENST00000361909 PI4K2BG5E9Z4 385 aa19.72■□□□□ 0.75
CMTM3-201ENST00000361909 NOP56O00567 594 aaKnown RBP19.72■□□□□ 0.75
CMTM3-201ENST00000361909 BANF1O75531 89 aa19.72■□□□□ 0.75
CMTM3-201ENST00000361909 KRT37O76014 449 aa19.72■□□□□ 0.75
CMTM3-201ENST00000361909 ABCD1P33897 745 aa19.72■□□□□ 0.75
CMTM3-201ENST00000361909 SLC26A2P50443 739 aa19.72■□□□□ 0.75
CMTM3-201ENST00000361909 TMPRSS15P98073 1019 aa19.72■□□□□ 0.75
CMTM3-201ENST00000361909 BST1Q10588 318 aa19.72■□□□□ 0.75
CMTM3-201ENST00000361909 DMP1Q13316 513 aaPredicted RBP19.72■□□□□ 0.75
CMTM3-201ENST00000361909 MSS51Q4VC12 460 aa19.72■□□□□ 0.75
CMTM3-201ENST00000361909 WDR44Q5JSH3 913 aa19.72■□□□□ 0.75
CMTM3-201ENST00000361909 BORAQ6PGQ7 559 aa19.72■□□□□ 0.75
CMTM3-201ENST00000361909 ARCQ7LC44 396 aa19.72■□□□□ 0.75
CMTM3-201ENST00000361909 ARPINQ7Z6K5 226 aa19.72■□□□□ 0.75
CMTM3-201ENST00000361909 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.72■□□□□ 0.75
CMTM3-201ENST00000361909 CPA4Q9UI42 421 aa19.72■□□□□ 0.75
CMTM3-201ENST00000361909 TBX20Q9UMR3 447 aa19.72■□□□□ 0.75
CMTM3-201ENST00000361909 PLLPQ9Y342 182 aa19.72■□□□□ 0.75
CMTM3-201ENST00000361909 ARHGAP10A1A4S6 786 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 GOLGA8SH3BPF8 625 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 GOLGA8MH3BSY2 632 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 SNNO75324 88 aaPredicted RBP19.71■□□□□ 0.75
CMTM3-201ENST00000361909 SPATA31D3P0C874 917 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms