RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 ROBO3Q96MS0 1386 aa13.89□□□□□ -0.19
LDB3-202ENST00000361373 ANKRD63C9JTQ0 380 aa13.89□□□□□ -0.19
LDB3-202ENST00000361373 SLCO1B7G3V0H7 640 aa13.89□□□□□ -0.19
LDB3-202ENST00000361373 EEF1DP29692 281 aaKnown RBP13.89□□□□□ -0.19
LDB3-202ENST00000361373 PPP3CCP48454 512 aa13.89□□□□□ -0.19
LDB3-202ENST00000361373 KDSRQ06136 332 aa13.89□□□□□ -0.19
LDB3-202ENST00000361373 MEA1Q16626 185 aa13.89□□□□□ -0.19
LDB3-202ENST00000361373 LRRC43Q8N309 656 aa13.89□□□□□ -0.19
LDB3-202ENST00000361373 TMEM199Q8N511 208 aa13.89□□□□□ -0.19
LDB3-202ENST00000361373 INPP4AQ96PE3 977 aaPredicted RBP13.89□□□□□ -0.19
LDB3-202ENST00000361373 A0A087X0B3 334 aa13.88□□□□□ -0.19
LDB3-202ENST00000361373 MYO1CO00159 1063 aa13.88□□□□□ -0.19
LDB3-202ENST00000361373 CBX4O00257 560 aa13.88□□□□□ -0.19
LDB3-202ENST00000361373 ALDH1A2O94788 518 aa13.88□□□□□ -0.19
LDB3-202ENST00000361373 GLP2RO95838 553 aa13.88□□□□□ -0.19
LDB3-202ENST00000361373 STX5Q13190 355 aa13.88□□□□□ -0.19
LDB3-202ENST00000361373 DSG4Q86SJ6 1040 aa13.88□□□□□ -0.19
LDB3-202ENST00000361373 OR2W6PQ8NHA6 318 aa13.88□□□□□ -0.19
LDB3-202ENST00000361373 ZBTB45Q96K62 511 aaPredicted RBP13.88□□□□□ -0.19
LDB3-202ENST00000361373 ZNF558Q96NG5 402 aa13.88□□□□□ -0.19
LDB3-202ENST00000361373 UTP6Q9NYH9 597 aaKnown RBP13.88□□□□□ -0.19
LDB3-202ENST00000361373 WTIPA6NIX2 430 aaPredicted RBP13.88□□□□□ -0.19
LDB3-202ENST00000361373 ENO1P06733 434 aaKnown RBP13.88□□□□□ -0.19
LDB3-202ENST00000361373 SNHG28P0DPA3 235 aa13.88□□□□□ -0.19
LDB3-202ENST00000361373 ZBTB48P10074 688 aaPredicted RBP13.88□□□□□ -0.19
LDB3-202ENST00000361373 LSP1P33241 339 aa13.88□□□□□ -0.19
LDB3-202ENST00000361373 NPY2RP49146 381 aa13.88□□□□□ -0.19
LDB3-202ENST00000361373 ANXA11P50995 505 aaKnown RBP13.88□□□□□ -0.19
LDB3-202ENST00000361373 BHMTQ93088 406 aa13.88□□□□□ -0.19
LDB3-202ENST00000361373 CIPCQ9C0C6 399 aa13.88□□□□□ -0.19
LDB3-202ENST00000361373 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.88□□□□□ -0.19
LDB3-202ENST00000361373 NT5MQ9NPB1 228 aa13.88□□□□□ -0.19
LDB3-202ENST00000361373 SF3B1O75533 1304 aaKnown RBP eCLIP13.88□□□□□ -0.19
LDB3-202ENST00000361373 TMEM150BA6NC51 233 aa13.88□□□□□ -0.19
LDB3-202ENST00000361373 SLC9A3R1O14745 358 aaPredicted RBP13.88□□□□□ -0.19
LDB3-202ENST00000361373 ACAT1P24752 427 aaKnown RBP13.88□□□□□ -0.19
LDB3-202ENST00000361373 MAPK1P28482 360 aa13.88□□□□□ -0.19
LDB3-202ENST00000361373 NOS2P35228 1153 aa13.88□□□□□ -0.19
LDB3-202ENST00000361373 PTPN7P35236 360 aa13.88□□□□□ -0.19
LDB3-202ENST00000361373 PDE1CQ14123 709 aaPredicted RBP13.88□□□□□ -0.19
LDB3-202ENST00000361373 CHI3L2Q15782 390 aa13.88□□□□□ -0.19
LDB3-202ENST00000361373 PPM1LQ5SGD2 360 aa13.88□□□□□ -0.19
LDB3-202ENST00000361373 ACBD5Q5T8D3 534 aaPredicted RBP13.88□□□□□ -0.19
LDB3-202ENST00000361373 COLGALT1Q8NBJ5 622 aa13.88□□□□□ -0.19
LDB3-202ENST00000361373 ETNPPLQ8TBG4 499 aa13.88□□□□□ -0.19
LDB3-202ENST00000361373 LENG9Q96B70 501 aa13.88□□□□□ -0.19
LDB3-202ENST00000361373 CDH9Q9ULB4 789 aa13.88□□□□□ -0.19
LDB3-202ENST00000361373 TFR2Q9UP52 801 aa13.88□□□□□ -0.19
LDB3-202ENST00000361373 ACOT9Q9Y305 439 aa13.88□□□□□ -0.19
LDB3-202ENST00000361373 SPACA6W5XKT8 324 aa13.88□□□□□ -0.19
LDB3-202ENST00000361373 ILDR2Q71H61 639 aa13.88□□□□□ -0.19
LDB3-202ENST00000361373 PTF1AQ7RTS3 328 aa13.88□□□□□ -0.19
LDB3-202ENST00000361373 SRPK1Q96SB4 655 aaKnown RBP13.88□□□□□ -0.19
LDB3-202ENST00000361373 FICDQ9BVA6 458 aa13.88□□□□□ -0.19
LDB3-202ENST00000361373 GRK2P25098 689 aa13.87□□□□□ -0.19
LDB3-202ENST00000361373 DEFB106AQ8N104 65 aa13.87□□□□□ -0.19
LDB3-202ENST00000361373 ANKRD7Q92527 254 aa13.87□□□□□ -0.19
LDB3-202ENST00000361373 CEP19Q96LK0 163 aa13.87□□□□□ -0.19
LDB3-202ENST00000361373 TMEM121Q9BTD3 319 aa13.87□□□□□ -0.19
LDB3-202ENST00000361373 ZCCHC2Q9C0B9 1178 aaKnown RBP13.87□□□□□ -0.19
LDB3-202ENST00000361373 LNPEPQ9UIQ6 1025 aa13.87□□□□□ -0.19
LDB3-202ENST00000361373 RNF112Q9ULX5 631 aa13.87□□□□□ -0.19
LDB3-202ENST00000361373 EIF3LQ9Y262 564 aaKnown RBP13.87□□□□□ -0.19
LDB3-202ENST00000361373 PHF20L1A8MW92 1017 aa13.87□□□□□ -0.19
LDB3-202ENST00000361373 HNRNPCL2B2RXH8 293 aa13.87□□□□□ -0.19
LDB3-202ENST00000361373 DDX3XO00571 662 aaKnown RBP eCLIP13.87□□□□□ -0.19
LDB3-202ENST00000361373 PTPN1P18031 435 aaKnown RBP13.87□□□□□ -0.19
LDB3-202ENST00000361373 ITGB5P18084 799 aa13.87□□□□□ -0.19
LDB3-202ENST00000361373 TUBP50607 506 aa13.87□□□□□ -0.19
LDB3-202ENST00000361373 MPP3Q13368 585 aa13.87□□□□□ -0.19
LDB3-202ENST00000361373 BMT2Q1RMZ1 405 aa13.87□□□□□ -0.19
LDB3-202ENST00000361373 DUSP28Q4G0W2 176 aa13.87□□□□□ -0.19
LDB3-202ENST00000361373 HYIQ5T013 277 aa13.87□□□□□ -0.19
LDB3-202ENST00000361373 LRRC38Q5VT99 294 aa13.87□□□□□ -0.19
LDB3-202ENST00000361373 ERAP2Q6P179 960 aa13.87□□□□□ -0.19
LDB3-202ENST00000361373 ARMC2Q8NEN0 867 aa13.87□□□□□ -0.19
LDB3-202ENST00000361373 PPTC7Q8NI37 304 aa13.87□□□□□ -0.19
LDB3-202ENST00000361373 DNAJC19Q96DA6 116 aa13.87□□□□□ -0.19
LDB3-202ENST00000361373 GIT1Q9Y2X7 761 aa13.87□□□□□ -0.19
LDB3-202ENST00000361373 KLF6Q99612 283 aaPredicted RBP13.87□□□□□ -0.19
LDB3-202ENST00000361373 ACO2Q99798 780 aaKnown RBP13.87□□□□□ -0.19
LDB3-202ENST00000361373 ADAM33Q9BZ11 813 aa13.87□□□□□ -0.19
LDB3-202ENST00000361373 KCTD10Q9H3F6 313 aa13.87□□□□□ -0.19
LDB3-202ENST00000361373 ATP13A1Q9HD20 1204 aa13.87□□□□□ -0.19
LDB3-202ENST00000361373 RAD54BQ9Y620 910 aa13.87□□□□□ -0.19
LDB3-202ENST00000361373 RBAK-RBAKDNI3L0D1 243 aa13.87□□□□□ -0.19
LDB3-202ENST00000361373 FGF10O15520 208 aaPredicted RBP13.87□□□□□ -0.19
LDB3-202ENST00000361373 OR1E1P30953 314 aa13.87□□□□□ -0.19
LDB3-202ENST00000361373 CACHD1Q5VU97 1274 aa13.87□□□□□ -0.19
LDB3-202ENST00000361373 LRRC52Q8N7C0 313 aa13.87□□□□□ -0.19
LDB3-202ENST00000361373 HTR3CQ8WXA8 447 aa13.87□□□□□ -0.19
LDB3-202ENST00000361373 EDEM1Q92611 657 aa13.87□□□□□ -0.19
LDB3-202ENST00000361373 NEUROG2Q9H2A3 272 aa13.87□□□□□ -0.19
LDB3-202ENST00000361373 ATXN3LQ9H3M9 355 aa13.87□□□□□ -0.19
LDB3-202ENST00000361373 NMRK2Q9NPI5 230 aa13.87□□□□□ -0.19
LDB3-202ENST00000361373 VANGL2Q9ULK5 521 aa13.87□□□□□ -0.19
LDB3-202ENST00000361373 ERI2A8K979 691 aaKnown RBP13.86□□□□□ -0.19
LDB3-202ENST00000361373 EFCAB14O75071 495 aa13.86□□□□□ -0.19
LDB3-202ENST00000361373 FAM107AO95990 144 aa13.86□□□□□ -0.19
LDB3-202ENST00000361373 HSPA1AP0DMV8 641 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms