RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 FAM149B1Q96BN6 582 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 NSL1Q96IY1 281 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 PTPN18Q99952 460 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 TSSK1BQ9BXA7 367 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 MTMR12Q9C0I1 747 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 NDEL1Q9GZM8 345 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 SAR1AQ9NR31 198 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 PCDHB2Q9Y5E7 798 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 COL4A5P29400 1685 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 RGS20O76081 388 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 TMEM63AO94886 807 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 FARP2O94887 1054 aaPredicted RBP9.44□□□□□ -0.9
TOP1-201ENST00000361337 ACO1P21399 889 aaKnown RBP9.44□□□□□ -0.9
TOP1-201ENST00000361337 GALK1P51570 392 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 ARFIP2P53365 341 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 SLC18A1P54219 525 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 OAZ1P54368 228 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 PHEXP78562 749 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 KCNT1Q5JUK3 1230 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 ZBTB41Q5SVQ8 909 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 TDRD10Q5VZ19 366 aaKnown RBP9.44□□□□□ -0.9
TOP1-201ENST00000361337 ZNF354CQ86Y25 554 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 GPD1LQ8N335 351 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 FBXO36Q8NEA4 188 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 SH3TC2Q8TF17 1288 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 DCAKDQ8WVC6 231 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 CPT1BQ92523 772 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 MFSD14AQ96MC6 490 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 HEXIM2Q96MH2 286 aaKnown RBP9.44□□□□□ -0.9
TOP1-201ENST00000361337 MIS12Q9H081 205 aa9.44□□□□□ -0.9
TOP1-201ENST00000361337 PPARGC1AQ9UBK2 798 aaKnown RBP9.44□□□□□ -0.9
TOP1-201ENST00000361337 H3BRJ5 948 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 CXCL8P10145 99 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 PSMC1P62191 440 aaKnown RBP9.43□□□□□ -0.9
TOP1-201ENST00000361337 OCRLQ01968 901 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 SP3Q02447 781 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 PRKCZQ05513 592 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 HIF1AQ16665 826 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 CDO1Q16878 200 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 ATF7IP2Q5U623 682 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 MAP4K3Q8IVH8 894 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 WDR75Q8IWA0 830 aaKnown RBP9.43□□□□□ -0.9
TOP1-201ENST00000361337 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.43□□□□□ -0.9
TOP1-201ENST00000361337 ANKRD36BP1Q96IX9 119 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 MCEEQ96PE7 176 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 MED10Q9BTT4 135 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 MARCOQ9UEW3 520 aaPredicted RBP9.43□□□□□ -0.9
TOP1-201ENST00000361337 ZBBXA8MT70 800 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 SPATA31C2B4DYI2 1134 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 FCHO1O14526 889 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 RNF8O76064 485 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 ZWINTO95229 277 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 VNN1O95497 513 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 PRKAR2AP13861 404 aaKnown RBP9.43□□□□□ -0.9
TOP1-201ENST00000361337 GCNT1Q02742 428 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 MORF4L2Q15014 288 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 CELF3Q5SZQ8 465 aaKnown RBP9.43□□□□□ -0.9
TOP1-201ENST00000361337 CENPUQ71F23 418 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 TAS1R3Q7RTX0 852 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 SAPCD2Q86UD0 394 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 KIAA0319LQ8IZA0 1049 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 ABI1Q8IZP0 508 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 PYROXD1Q8WU10 500 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 TTC25Q96NG3 672 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 NR1H4Q96RI1 486 aaPredicted RBP9.43□□□□□ -0.9
TOP1-201ENST00000361337 TUBGCP5Q96RT8 1024 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 TRIM55Q9BYV6 548 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 MRPL46Q9H2W6 279 aaKnown RBP9.43□□□□□ -0.9
TOP1-201ENST00000361337 ANKEF1Q9NU02 776 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 ZNF180Q9UJW8 692 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 TIMM13Q9Y5L4 95 aaPredicted RBP9.43□□□□□ -0.9
TOP1-201ENST00000361337 SNX9Q9Y5X1 595 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 WDR81Q562E7 1941 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 XPO1O14980 1071 aaKnown RBP9.43□□□□□ -0.9
TOP1-201ENST00000361337 STRNO43815 780 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 PQBP1O60828 265 aaKnown RBP9.43□□□□□ -0.9
TOP1-201ENST00000361337 AVILO75366 819 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 HLA-DRAP01903 254 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 S100BP04271 92 aaPredicted RBP9.43□□□□□ -0.9
TOP1-201ENST00000361337 ENO1P06733 434 aaKnown RBP9.43□□□□□ -0.9
TOP1-201ENST00000361337 SPATA31D3P0C874 917 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 TNFSF9P41273 254 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 VCPP55072 806 aaKnown RBP9.43□□□□□ -0.9
TOP1-201ENST00000361337 CDK16Q00536 496 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 TRIM32Q13049 653 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 BBS9Q3SYG4 887 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 PLEKHA7Q6IQ23 1121 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 IYDQ6PHW0 289 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 SPOCD1Q6ZMY3 1216 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 SPATA31D4Q6ZUB0 917 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 TMEM174Q8WUU8 243 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 RNF208Q9H0X6 261 aa9.43□□□□□ -0.9
TOP1-201ENST00000361337 FARP1Q9Y4F1 1045 aaPredicted RBP9.43□□□□□ -0.9
TOP1-201ENST00000361337 GOLGA4Q13439 2230 aaKnown RBP9.42□□□□□ -0.9
TOP1-201ENST00000361337 CCDC195A0A1B0GUA6 201 aa9.42□□□□□ -0.9
TOP1-201ENST00000361337 CFLARO15519 480 aa9.42□□□□□ -0.9
TOP1-201ENST00000361337 SORBS2O94875 1100 aaKnown RBP9.42□□□□□ -0.9
TOP1-201ENST00000361337 CD48P09326 243 aa9.42□□□□□ -0.9
TOP1-201ENST00000361337 MAPTP10636 758 aaKnown RBP9.42□□□□□ -0.9
TOP1-201ENST00000361337 GNA15P30679 374 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms