RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 LPXNO60711 386 aa27.36■■□□□ 1.97
CUEDC1-201ENST00000360238 FAM155BO75949 473 aa27.36■■□□□ 1.97
CUEDC1-201ENST00000360238 C1QAP02745 245 aa27.36■■□□□ 1.97
CUEDC1-201ENST00000360238 YBX3P16989 372 aaKnown RBP eCLIP27.36■■□□□ 1.97
CUEDC1-201ENST00000360238 ACADSBP45954 432 aa27.36■■□□□ 1.97
CUEDC1-201ENST00000360238 SLC45A4Q5BKX6 768 aa27.36■■□□□ 1.97
CUEDC1-201ENST00000360238 SYCP2LQ5T4T6 812 aa27.36■■□□□ 1.97
CUEDC1-201ENST00000360238 CAND1Q86VP6 1230 aaKnown RBP27.36■■□□□ 1.97
CUEDC1-201ENST00000360238 SLC26A11Q86WA9 606 aa27.36■■□□□ 1.97
CUEDC1-201ENST00000360238 CHSY1Q86X52 802 aa27.36■■□□□ 1.97
CUEDC1-201ENST00000360238 CDHR5Q9HBB8 845 aa27.36■■□□□ 1.97
CUEDC1-201ENST00000360238 GDAP2Q9NXN4 497 aa27.36■■□□□ 1.97
CUEDC1-201ENST00000360238 SLC17A7Q9P2U7 560 aa27.36■■□□□ 1.97
CUEDC1-201ENST00000360238 ZNF180Q9UJW8 692 aa27.36■■□□□ 1.97
CUEDC1-201ENST00000360238 DHRS4L1P0CG22 281 aa27.36■■□□□ 1.97
CUEDC1-201ENST00000360238 TFE3P19532 575 aaPredicted RBP27.36■■□□□ 1.97
CUEDC1-201ENST00000360238 PNPLA4P41247 253 aa27.36■■□□□ 1.97
CUEDC1-201ENST00000360238 PREPLQ4J6C6 727 aaPredicted RBP27.36■■□□□ 1.97
CUEDC1-201ENST00000360238 WLSQ5T9L3 541 aa27.36■■□□□ 1.97
CUEDC1-201ENST00000360238 SH2D5Q6ZV89 423 aa27.36■■□□□ 1.97
CUEDC1-201ENST00000360238 PLEKHH3Q7Z736 793 aa27.36■■□□□ 1.97
CUEDC1-201ENST00000360238 THOC1Q96FV9 657 aaKnown RBP27.36■■□□□ 1.97
CUEDC1-201ENST00000360238 CFAP36Q96G28 342 aa27.36■■□□□ 1.97
CUEDC1-201ENST00000360238 ZC3H7BQ9UGR2 993 aaKnown RBP27.36■■□□□ 1.97
CUEDC1-201ENST00000360238 AP4E1Q9UPM8 1137 aa27.36■■□□□ 1.97
CUEDC1-201ENST00000360238 TRDMT1O14717 391 aaKnown RBP27.35■■□□□ 1.97
CUEDC1-201ENST00000360238 GCATO75600 419 aa27.35■■□□□ 1.97
CUEDC1-201ENST00000360238 CCDC130P13994 396 aa27.35■■□□□ 1.97
CUEDC1-201ENST00000360238 FAAP100Q0VG06 881 aa27.35■■□□□ 1.97
CUEDC1-201ENST00000360238 C7orf31Q8N865 590 aa27.35■■□□□ 1.97
CUEDC1-201ENST00000360238 CLEC4CQ8WTT0 213 aa27.35■■□□□ 1.97
CUEDC1-201ENST00000360238 SERAC1Q96JX3 654 aa27.35■■□□□ 1.97
CUEDC1-201ENST00000360238 KLF6Q99612 283 aaPredicted RBP27.35■■□□□ 1.97
CUEDC1-201ENST00000360238 DHX35Q9H5Z1 703 aaKnown RBP27.35■■□□□ 1.97
CUEDC1-201ENST00000360238 ETNK1Q9HBU6 452 aa27.35■■□□□ 1.97
CUEDC1-201ENST00000360238 GJD2Q9UKL4 321 aa27.35■■□□□ 1.97
CUEDC1-201ENST00000360238 HGSO14964 777 aaPredicted RBP27.35■■□□□ 1.97
CUEDC1-201ENST00000360238 XPOTO43592 962 aaKnown RBP27.35■■□□□ 1.97
CUEDC1-201ENST00000360238 APRTP07741 180 aa27.35■■□□□ 1.97
CUEDC1-201ENST00000360238 KRT16P08779 473 aa27.35■■□□□ 1.97
CUEDC1-201ENST00000360238 TROVE2P10155 538 aaKnown RBP eCLIP27.35■■□□□ 1.97
CUEDC1-201ENST00000360238 CYP2C9P11712 490 aa27.35■■□□□ 1.97
CUEDC1-201ENST00000360238 TPSB2P20231 275 aa27.35■■□□□ 1.97
CUEDC1-201ENST00000360238 PRKCHP24723 683 aa27.35■■□□□ 1.97
CUEDC1-201ENST00000360238 ADORA2BP29275 332 aa27.35■■□□□ 1.97
CUEDC1-201ENST00000360238 TPSAB1Q15661 275 aa27.35■■□□□ 1.97
CUEDC1-201ENST00000360238 TTC39BQ5VTQ0 682 aaPredicted RBP27.35■■□□□ 1.97
CUEDC1-201ENST00000360238 VPS52Q8N1B4 723 aa27.35■■□□□ 1.97
CUEDC1-201ENST00000360238 KIF2BQ8N4N8 673 aa27.35■■□□□ 1.97
CUEDC1-201ENST00000360238 HSFY1Q96LI6 401 aa27.35■■□□□ 1.97
CUEDC1-201ENST00000360238 QKIQ96PU8 341 aaKnown RBP eCLIP27.35■■□□□ 1.97
CUEDC1-201ENST00000360238 LPIN3Q9BQK8 851 aa27.35■■□□□ 1.97
CUEDC1-201ENST00000360238 KPNA7A9QM74 516 aa27.34■■□□□ 1.97
CUEDC1-201ENST00000360238 C2CD2LO14523 706 aa27.34■■□□□ 1.97
CUEDC1-201ENST00000360238 GNL1P36915 607 aaPredicted RBP27.34■■□□□ 1.97
CUEDC1-201ENST00000360238 ETV4P43268 484 aa27.34■■□□□ 1.97
CUEDC1-201ENST00000360238 MAGEA3P43357 314 aa27.34■■□□□ 1.97
CUEDC1-201ENST00000360238 FAXCQ5TGI0 409 aa27.34■■□□□ 1.97
CUEDC1-201ENST00000360238 CCDC110Q8TBZ0 833 aa27.34■■□□□ 1.97
CUEDC1-201ENST00000360238 APBB2Q92870 758 aa27.34■■□□□ 1.97
CUEDC1-201ENST00000360238 MANSC1Q9H8J5 431 aa27.34■■□□□ 1.97
CUEDC1-201ENST00000360238 SLC5A4Q9NY91 659 aa27.34■■□□□ 1.97
CUEDC1-201ENST00000360238 FAM110CQ1W6H9 321 aa27.33■■□□□ 1.97
CUEDC1-201ENST00000360238 STRADAQ7RTN6 431 aa27.33■■□□□ 1.97
CUEDC1-201ENST00000360238 LRRC6Q86X45 466 aa27.33■■□□□ 1.97
CUEDC1-201ENST00000360238 LRMDAQ9H2I8 198 aa27.33■■□□□ 1.97
CUEDC1-201ENST00000360238 SNX25Q9H3E2 840 aa27.33■■□□□ 1.97
CUEDC1-201ENST00000360238 MTMR10Q9NXD2 777 aa27.33■■□□□ 1.97
CUEDC1-201ENST00000360238 SMIM28A0A1B0GU29 152 aa27.33■■□□□ 1.97
CUEDC1-201ENST00000360238 HCRTO43612 131 aa27.33■■□□□ 1.97
CUEDC1-201ENST00000360238 MAP3K6O95382 1288 aa27.33■■□□□ 1.97
CUEDC1-201ENST00000360238 GBE1Q04446 702 aa27.33■■□□□ 1.97
CUEDC1-201ENST00000360238 XKR4Q5GH76 650 aa27.33■■□□□ 1.97
CUEDC1-201ENST00000360238 LIMS2Q7Z4I7 341 aa27.33■■□□□ 1.97
CUEDC1-201ENST00000360238 PRPF39Q86UA1 669 aaKnown RBP27.33■■□□□ 1.97
CUEDC1-201ENST00000360238 RAB3IPQ96QF0 476 aaPredicted RBP27.33■■□□□ 1.97
CUEDC1-201ENST00000360238 PARK7Q99497 189 aaKnown RBP27.33■■□□□ 1.97
CUEDC1-201ENST00000360238 LCP1P13796 627 aa27.32■■□□□ 1.96
CUEDC1-201ENST00000360238 KCNE1P15382 129 aa27.32■■□□□ 1.96
CUEDC1-201ENST00000360238 AKAP5P24588 427 aa27.32■■□□□ 1.96
CUEDC1-201ENST00000360238 NPLOC4Q8TAT6 608 aa27.32■■□□□ 1.96
CUEDC1-201ENST00000360238 CSPG4P5Q96PW8 444 aa27.32■■□□□ 1.96
CUEDC1-201ENST00000360238 KCTD15Q96SI1 283 aaPredicted RBP27.32■■□□□ 1.96
CUEDC1-201ENST00000360238 APOL6Q9BWW8 343 aa27.32■■□□□ 1.96
CUEDC1-201ENST00000360238 TRIM33Q9UPN9 1127 aa27.32■■□□□ 1.96
CUEDC1-201ENST00000360238 SLC15A5A6NIM6 579 aa27.32■■□□□ 1.96
CUEDC1-201ENST00000360238 KRT37O76014 449 aa27.32■■□□□ 1.96
CUEDC1-201ENST00000360238 TAF6P49848 677 aa27.32■■□□□ 1.96
CUEDC1-201ENST00000360238 IRF5Q13568 498 aa27.32■■□□□ 1.96
CUEDC1-201ENST00000360238 APPL2Q8NEU8 664 aa27.32■■□□□ 1.96
CUEDC1-201ENST00000360238 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP27.32■■□□□ 1.96
CUEDC1-201ENST00000360238 PIN4Q9Y237 131 aaKnown RBP27.32■■□□□ 1.96
CUEDC1-201ENST00000360238 WDR91A4D1P6 747 aa27.31■■□□□ 1.96
CUEDC1-201ENST00000360238 SPTLC1O15269 473 aa27.31■■□□□ 1.96
CUEDC1-201ENST00000360238 APOEP02649 317 aa27.31■■□□□ 1.96
CUEDC1-201ENST00000360238 PDGFRBP09619 1106 aa27.31■■□□□ 1.96
CUEDC1-201ENST00000360238 PYGBP11216 843 aa27.31■■□□□ 1.96
CUEDC1-201ENST00000360238 SLC10A2Q12908 348 aaPredicted RBP27.31■■□□□ 1.96
CUEDC1-201ENST00000360238 SV2CQ496J9 727 aa27.31■■□□□ 1.96
CUEDC1-201ENST00000360238 EFHC1Q5JVL4 640 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms