RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 TTC23Q5W5X9 447 aa17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 PRKD2Q9BZL6 878 aa17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 BARHL2Q9NY43 387 aa17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 TEX46H3BTG2 121 aa17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 WWP2O00308 870 aa17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 TM9SF1O15321 606 aa17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 GPD1P21695 349 aa17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 ACADLP28330 430 aa17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 ABATP80404 500 aa17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 TMEM143Q96AN5 459 aa17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 R3HDM2Q9Y2K5 976 aaKnown RBP17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 PRODHO43272 600 aa17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 FAM58BPP0C7Q3 252 aa17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 TBCELQ5QJ74 424 aa17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 HPS6Q86YV9 775 aa17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 TSPAN14Q8NG11 270 aa17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 MAGEB18Q96M61 343 aa17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 CCDC189A1A4V9 331 aa17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 IFNGR2P38484 337 aa17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 TMEM63BQ5T3F8 832 aa17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 MTSS1LQ765P7 747 aa17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 CHORDC1Q9UHD1 332 aaPredicted RBP17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 PSMD11O00231 422 aa17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 FASP25445 335 aa17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 GJA8P48165 433 aa17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 CLK2P49760 499 aaKnown RBP17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 CEBPGP53567 150 aa17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 RASA2Q15283 850 aa17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 OSBPL5Q9H0X9 879 aaPredicted RBP17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 GRIN2AQ12879 1464 aa17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 STK36Q9NRP7 1315 aa17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 SASH1O94885 1247 aa17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 FMO5P49326 533 aa17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 ITIH4Q14624 930 aa17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 STILQ15468 1287 aa17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 TMED8Q6PL24 325 aaPredicted RBP17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 ZNF112Q9UJU3 913 aa17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 ABCC2Q92887 1545 aa17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 PP2D1A8MPX8 630 aa17.78■□□□□ 0.44
CACNA1A-201ENST00000360228 CCDC154A6NI56 674 aa17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 INPP4BO15327 924 aa17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 POLNQ7Z5Q5 900 aa17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 RIN2Q8WYP3 895 aaPredicted RBP17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 WDR41Q9HAD4 459 aa17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 DSEQ9UL01 958 aa17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 PVALEFA0A1B0GWK0 134 aa17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 GNB5O14775 395 aa17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 FGFR1P11362 822 aa17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 BNC1Q01954 994 aa17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 UBA3Q8TBC4 463 aa17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 CLCC1Q96S66 551 aa17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 ELOVL6Q9H5J4 265 aa17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 CLASP1Q7Z460 1538 aa17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 LARGE1O95461 756 aa17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 ZNF177Q13360 481 aaPredicted RBP17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 AMHR2Q16671 573 aa17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 KCTD21Q4G0X4 260 aa17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 IER5Q5VY09 327 aa17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 FAM220AQ7Z4H9 259 aa17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 SAMD3Q8N6K7 520 aa17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 FAM172AQ8WUF8 416 aa17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 EPB41L4AQ9HCS5 686 aaPredicted RBP17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 RBM7Q9Y580 266 aaKnown RBP17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 ASB14A6NK59 587 aa17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 KCNV1Q6PIU1 500 aa17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 GPR108Q9NPR9 543 aa17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 TRIM10Q9UDY6 481 aa17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 ASAP1Q9ULH1 1129 aa17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 PCDHA10Q9Y5I2 948 aa17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 HIST1H2ABP04908 130 aa17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 GALCP54803 685 aa17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 AP1S1P61966 158 aa17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 HIST3H2AQ7L7L0 130 aa17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 APOBEC3FQ8IUX4 373 aaKnown RBP17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 CLHC1Q8NHS4 586 aa17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 IPCEF1Q8WWN9 437 aaPredicted RBP17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 HIST1H2ACQ93077 130 aa17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 FAM120BQ96EK7 910 aaKnown RBP17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 OTUD5Q96G74 571 aa17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 AP1S3Q96PC3 154 aa17.77■□□□□ 0.44
CACNA1A-201ENST00000360228 A0A1W2PQC6 194 aa17.77■□□□□ 0.43
CACNA1A-201ENST00000360228 PCSK1P29120 753 aa17.77■□□□□ 0.43
CACNA1A-201ENST00000360228 FDFT1P37268 417 aa17.77■□□□□ 0.43
CACNA1A-201ENST00000360228 CCDC153Q494R4 210 aa17.77■□□□□ 0.43
CACNA1A-201ENST00000360228 PYHIN1Q6K0P9 492 aa17.77■□□□□ 0.43
CACNA1A-201ENST00000360228 C4orf22Q6V702 233 aa17.77■□□□□ 0.43
CACNA1A-201ENST00000360228 FAM196AQ6ZSG2 479 aa17.77■□□□□ 0.43
CACNA1A-201ENST00000360228 KCNB2Q92953 911 aa17.77■□□□□ 0.43
CACNA1A-201ENST00000360228 FAM92AA1XBS5 289 aa17.77■□□□□ 0.43
CACNA1A-201ENST00000360228 IFRD1O00458 451 aaPredicted RBP17.77■□□□□ 0.43
CACNA1A-201ENST00000360228 SLC16A3O15427 465 aaKnown RBP17.77■□□□□ 0.43
CACNA1A-201ENST00000360228 CST8O60676 142 aa17.77■□□□□ 0.43
CACNA1A-201ENST00000360228 IL18RAPO95256 599 aa17.77■□□□□ 0.43
CACNA1A-201ENST00000360228 SMCO1Q147U7 214 aa17.77■□□□□ 0.43
CACNA1A-201ENST00000360228 NR6A1Q15406 480 aa17.77■□□□□ 0.43
CACNA1A-201ENST00000360228 SAPCD2Q86UD0 394 aa17.77■□□□□ 0.43
CACNA1A-201ENST00000360228 CHP1Q99653 195 aa17.77■□□□□ 0.43
CACNA1A-201ENST00000360228 NUAK2Q9H093 628 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms