RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 GKAP1Q5VSY0 366 aaPredicted RBP19.01■□□□□ 0.63
PDLIM7-203ENST00000359895 AGMOQ6ZNB7 445 aa19.01■□□□□ 0.63
PDLIM7-203ENST00000359895 YTHDF3Q7Z739 585 aaKnown RBP19.01■□□□□ 0.63
PDLIM7-203ENST00000359895 DYDC1Q8WWB3 177 aa19.01■□□□□ 0.63
PDLIM7-203ENST00000359895 MAML1Q92585 1016 aa19.01■□□□□ 0.63
PDLIM7-203ENST00000359895 FAM149B1Q96BN6 582 aa19.01■□□□□ 0.63
PDLIM7-203ENST00000359895 PGBD4Q96DM1 585 aa19.01■□□□□ 0.63
PDLIM7-203ENST00000359895 PRMT1Q99873 361 aaKnown RBP19.01■□□□□ 0.63
PDLIM7-203ENST00000359895 NSRP1Q9H0G5 558 aaKnown RBP19.01■□□□□ 0.63
PDLIM7-203ENST00000359895 KCNK9Q9NPC2 374 aa19.01■□□□□ 0.63
PDLIM7-203ENST00000359895 MIOSQ9NXC5 875 aa19.01■□□□□ 0.63
PDLIM7-203ENST00000359895 TBK1Q9UHD2 729 aa19.01■□□□□ 0.63
PDLIM7-203ENST00000359895 CLDN5O00501 218 aa19■□□□□ 0.63
PDLIM7-203ENST00000359895 TMEM63AO94886 807 aa19■□□□□ 0.63
PDLIM7-203ENST00000359895 PCSK1P29120 753 aa19■□□□□ 0.63
PDLIM7-203ENST00000359895 EFHC2Q5JST6 749 aa19■□□□□ 0.63
PDLIM7-203ENST00000359895 ARHGEF18Q6ZSZ5 1173 aa19■□□□□ 0.63
PDLIM7-203ENST00000359895 BZW1Q7L1Q6 419 aaKnown RBP19■□□□□ 0.63
PDLIM7-203ENST00000359895 ANKMY2Q8IV38 441 aa19■□□□□ 0.63
PDLIM7-203ENST00000359895 PALM2Q8IXS6 379 aa19■□□□□ 0.63
PDLIM7-203ENST00000359895 CACNA2D3Q8IZS8 1091 aa19■□□□□ 0.63
PDLIM7-203ENST00000359895 CYP4X1Q8N118 509 aa19■□□□□ 0.63
PDLIM7-203ENST00000359895 LPPQ93052 612 aa19■□□□□ 0.63
PDLIM7-203ENST00000359895 NT5C3BQ969T7 300 aa19■□□□□ 0.63
PDLIM7-203ENST00000359895 SLC2A13Q96QE2 648 aa19■□□□□ 0.63
PDLIM7-203ENST00000359895 KCTD15Q96SI1 283 aaPredicted RBP19■□□□□ 0.63
PDLIM7-203ENST00000359895 KLC2Q9H0B6 622 aa19■□□□□ 0.63
PDLIM7-203ENST00000359895 AGO3Q9H9G7 860 aaKnown RBP19■□□□□ 0.63
PDLIM7-203ENST00000359895 CRTAC1Q9NQ79 661 aa19■□□□□ 0.63
PDLIM7-203ENST00000359895 KRT82Q9NSB4 513 aa19■□□□□ 0.63
PDLIM7-203ENST00000359895 MTMR10Q9NXD2 777 aa19■□□□□ 0.63
PDLIM7-203ENST00000359895 NKIRAS1Q9NYS0 192 aa19■□□□□ 0.63
PDLIM7-203ENST00000359895 FZD10Q9ULW2 581 aa19■□□□□ 0.63
PDLIM7-203ENST00000359895 PADI3Q9ULW8 664 aa19■□□□□ 0.63
PDLIM7-203ENST00000359895 RASA4BC9J798 803 aa18.99■□□□□ 0.63
PDLIM7-203ENST00000359895 POC1B-GALNT4F8VUJ3 575 aa18.99■□□□□ 0.63
PDLIM7-203ENST00000359895 MYO1CO00159 1063 aa18.99■□□□□ 0.63
PDLIM7-203ENST00000359895 RASA4O43374 803 aa18.99■□□□□ 0.63
PDLIM7-203ENST00000359895 SPAG6O75602 509 aa18.99■□□□□ 0.63
PDLIM7-203ENST00000359895 GCAP28676 217 aa18.99■□□□□ 0.63
PDLIM7-203ENST00000359895 RBL1P28749 1068 aa18.99■□□□□ 0.63
PDLIM7-203ENST00000359895 SCNN1GP51170 649 aa18.99■□□□□ 0.63
PDLIM7-203ENST00000359895 GEMIN4P57678 1058 aaKnown RBP18.99■□□□□ 0.63
PDLIM7-203ENST00000359895 GPX6P59796 221 aa18.99■□□□□ 0.63
PDLIM7-203ENST00000359895 TRIM32Q13049 653 aa18.99■□□□□ 0.63
PDLIM7-203ENST00000359895 PTK7Q13308 1070 aa18.99■□□□□ 0.63
PDLIM7-203ENST00000359895 DSC3Q14574 896 aa18.99■□□□□ 0.63
PDLIM7-203ENST00000359895 BBS9Q3SYG4 887 aa18.99■□□□□ 0.63
PDLIM7-203ENST00000359895 SLC45A4Q5BKX6 768 aa18.99■□□□□ 0.63
PDLIM7-203ENST00000359895 HP1BP3Q5SSJ5 553 aaPredicted RBP18.99■□□□□ 0.63
PDLIM7-203ENST00000359895 CCSAPQ6IQ19 270 aaPredicted RBP18.99■□□□□ 0.63
PDLIM7-203ENST00000359895 BNIPLQ7Z465 357 aa18.99■□□□□ 0.63
PDLIM7-203ENST00000359895 FAM35AQ86V20 835 aa18.99■□□□□ 0.63
PDLIM7-203ENST00000359895 SRRM1Q8IYB3 904 aaKnown RBP18.99■□□□□ 0.63
PDLIM7-203ENST00000359895 CCDC185Q8N715 623 aa18.99■□□□□ 0.63
PDLIM7-203ENST00000359895 CSPG4P5Q96PW8 444 aa18.99■□□□□ 0.63
PDLIM7-203ENST00000359895 NPY6RQ99463 290 aa18.99■□□□□ 0.63
PDLIM7-203ENST00000359895 ADAM33Q9BZ11 813 aa18.99■□□□□ 0.63
PDLIM7-203ENST00000359895 PSMC3IPQ9P2W1 217 aaPredicted RBP18.99■□□□□ 0.63
PDLIM7-203ENST00000359895 DDX20Q9UHI6 824 aaKnown RBP18.99■□□□□ 0.63
PDLIM7-203ENST00000359895 SQORQ9Y6N5 450 aa18.99■□□□□ 0.63
PDLIM7-203ENST00000359895 CLUHO75153 1309 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 TCRBV7S3A2A0A539 114 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 HACD1B0YJ81 288 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 CABYRO75952 493 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 BEST1O76090 585 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 ODC1P11926 461 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 CD52P31358 61 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 MAGEA6P43360 314 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 TKTL1P51854 596 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 AIF1P55008 147 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 MAP3K7CLP57077 242 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 QPCTQ16769 361 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 UPP1Q16831 310 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 MSS51Q4VC12 460 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 DCAF6Q58WW2 860 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 FAM26DQ5JW98 314 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 KIAA0319Q5VV43 1072 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 TRABD2AQ86V40 505 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 METTL23Q86XA0 190 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 FBXO36Q8NEA4 188 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 SEC16BQ96JE7 1060 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 ACSS3Q9H6R3 686 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 POPDC2Q9HBU9 364 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 CNGB3Q9NQW8 809 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 RABGEF1Q9UJ41 708 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 A0A0U1RQF3 1178 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 ARHGEF37A1IGU5 675 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 H3BRJ5 948 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 ZNF189O75820 626 aaPredicted RBP18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 AP1G2O75843 785 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 CCND3P30281 292 aaPredicted RBP18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 SLC18A1P54219 525 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 ATXN1P54253 815 aaKnown RBP18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 GAD2Q05329 585 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 GRIK3Q13003 919 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 C6orf89Q6UWU4 347 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 C3orf62Q6ZUJ4 267 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 TAB3Q8N5C8 712 aaPredicted RBP18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 SGSM3Q96HU1 749 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms