RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 IGSF9BQ9UPX0 1349 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 FASP25445 335 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 RFC5P40937 340 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 HASPINQ8TF76 798 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 FAM172AQ8WUF8 416 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 VPS33AQ96AX1 596 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 DGCR6LQ9BY27 220 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 PRR12Q9ULL5 1215 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 VPS9D1Q9Y2B5 631 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 FAM220BPB1ANY3 271 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 FOXN3O00409 490 aaPredicted RBP16.48■□□□□ 0.23
COL18A1-203ENST00000359759 LRG1P02750 347 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 SERPINH1P50454 418 aaKnown RBP16.48■□□□□ 0.23
COL18A1-203ENST00000359759 EID3Q8N140 333 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 MXRA8Q9BRK3 442 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 DDX20Q9UHI6 824 aaKnown RBP16.48■□□□□ 0.23
COL18A1-203ENST00000359759 CDK12Q9NYV4 1490 aaPredicted RBP16.48■□□□□ 0.23
COL18A1-203ENST00000359759 TAF4O00268 1085 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 TRAF3Q13114 568 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 ZNF284Q2VY69 593 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 FAM98BQ52LJ0 330 aaKnown RBP16.48■□□□□ 0.23
COL18A1-203ENST00000359759 ELMO3Q96BJ8 720 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 CLPBQ9H078 707 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 OSGEPL1Q9H4B0 414 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 PNPLA7Q6ZV29 1317 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 SAMD9Q5K651 1589 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 KIF1BO60333 1816 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 TTLL13PA6NNM8 815 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 UBDO15205 165 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 TIMM44O43615 452 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 IL6P05231 212 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 FGD3Q5JSP0 725 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 CASP12Q6UXS9 341 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 CBWD2Q8IUF1 395 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 C3orf20Q8ND61 904 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 SLITRK1Q96PX8 696 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 UBXN6Q9BZV1 441 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 NT5MQ9NPB1 228 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 CAPN6Q9Y6Q1 641 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 NLRP1Q9C000 1473 aa16.47■□□□□ 0.23
COL18A1-203ENST00000359759 CAPSLQ8WWF8 208 aa16.47■□□□□ 0.23
COL18A1-203ENST00000359759 FUT8Q9BYC5 575 aa16.47■□□□□ 0.23
COL18A1-203ENST00000359759 STON1Q9Y6Q2 735 aa16.47■□□□□ 0.23
COL18A1-203ENST00000359759 A0A087X0T9 212 aa16.47■□□□□ 0.23
COL18A1-203ENST00000359759 H3BQF6 201 aa16.47■□□□□ 0.23
COL18A1-203ENST00000359759 FAM228BP0C875 321 aa16.47■□□□□ 0.23
COL18A1-203ENST00000359759 ERVK-10P10266 1014 aa16.47■□□□□ 0.23
COL18A1-203ENST00000359759 ACO1P21399 889 aaKnown RBP16.47■□□□□ 0.23
COL18A1-203ENST00000359759 CCT3P49368 545 aaKnown RBP16.47■□□□□ 0.23
COL18A1-203ENST00000359759 EML3Q32P44 896 aa16.47■□□□□ 0.23
COL18A1-203ENST00000359759 SLC25A24Q6NUK1 477 aa16.47■□□□□ 0.23
COL18A1-203ENST00000359759 GLB1LQ6UWU2 654 aa16.47■□□□□ 0.23
COL18A1-203ENST00000359759 SLFN11Q7Z7L1 901 aa16.47■□□□□ 0.23
COL18A1-203ENST00000359759 ATP8B4Q8TF62 1192 aa16.47■□□□□ 0.23
COL18A1-203ENST00000359759 MRPL48Q96GC5 212 aaKnown RBP16.47■□□□□ 0.23
COL18A1-203ENST00000359759 SLC9A8Q9Y2E8 581 aa16.47■□□□□ 0.23
COL18A1-203ENST00000359759 SLC11A2P49281 568 aa16.47■□□□□ 0.23
COL18A1-203ENST00000359759 TAF6P49848 677 aa16.47■□□□□ 0.23
COL18A1-203ENST00000359759 NDUFA5Q16718 116 aa16.47■□□□□ 0.23
COL18A1-203ENST00000359759 POU5F2Q8N7G0 328 aa16.47■□□□□ 0.23
COL18A1-203ENST00000359759 H3BN98 237 aa16.47■□□□□ 0.23
COL18A1-203ENST00000359759 NR3C2P08235 984 aa16.47■□□□□ 0.23
COL18A1-203ENST00000359759 CYP2C9P11712 490 aa16.47■□□□□ 0.23
COL18A1-203ENST00000359759 ODC1P11926 461 aa16.47■□□□□ 0.23
COL18A1-203ENST00000359759 HERVK_113P62684 666 aa16.47■□□□□ 0.23
COL18A1-203ENST00000359759 ARF5P84085 180 aa16.47■□□□□ 0.23
COL18A1-203ENST00000359759 ZNF438Q7Z4V0 828 aa16.47■□□□□ 0.23
COL18A1-203ENST00000359759 KANSL1LA0AUZ9 987 aa16.47■□□□□ 0.23
COL18A1-203ENST00000359759 SH3BGRLO75368 114 aa16.47■□□□□ 0.23
COL18A1-203ENST00000359759 TPH1P17752 444 aa16.47■□□□□ 0.23
COL18A1-203ENST00000359759 LRRC40Q9H9A6 602 aa16.47■□□□□ 0.23
COL18A1-203ENST00000359759 EPB41L4AQ9HCS5 686 aaPredicted RBP16.47■□□□□ 0.23
COL18A1-203ENST00000359759 OSGEPQ9NPF4 335 aa16.47■□□□□ 0.23
COL18A1-203ENST00000359759 GPRC5CQ9NQ84 441 aa16.47■□□□□ 0.23
COL18A1-203ENST00000359759 KCND2Q9NZV8 630 aa16.47■□□□□ 0.23
COL18A1-203ENST00000359759 TUBE1Q9UJT0 475 aa16.47■□□□□ 0.23
COL18A1-203ENST00000359759 MBL2P11226 248 aaPredicted RBP16.46■□□□□ 0.23
COL18A1-203ENST00000359759 STIP1P31948 543 aaKnown RBP16.46■□□□□ 0.23
COL18A1-203ENST00000359759 PAN2Q504Q3 1202 aaKnown RBP16.46■□□□□ 0.23
COL18A1-203ENST00000359759 NOTUMQ6P988 496 aa16.46■□□□□ 0.23
COL18A1-203ENST00000359759 DENND6AQ8IWF6 608 aa16.46■□□□□ 0.23
COL18A1-203ENST00000359759 LIMD1Q9UGP4 676 aa16.46■□□□□ 0.23
COL18A1-203ENST00000359759 IQCMA0A1B0GVH7 501 aa16.46■□□□□ 0.23
COL18A1-203ENST00000359759 FAM47E-STBD1D6RA91 191 aa16.46■□□□□ 0.23
COL18A1-203ENST00000359759 WEE1P30291 646 aa16.46■□□□□ 0.23
COL18A1-203ENST00000359759 SLC47A2Q86VL8 602 aa16.46■□□□□ 0.23
COL18A1-203ENST00000359759 OR6Y1Q8NGX8 325 aa16.46■□□□□ 0.23
COL18A1-203ENST00000359759 RMND5BQ96G75 393 aaPredicted RBP16.46■□□□□ 0.23
COL18A1-203ENST00000359759 TRAPPC9Q96Q05 1148 aa16.46■□□□□ 0.23
COL18A1-203ENST00000359759 PHACTR1Q9C0D0 580 aa16.46■□□□□ 0.23
COL18A1-203ENST00000359759 ZMYM5Q9UJ78 669 aa16.46■□□□□ 0.23
COL18A1-203ENST00000359759 CPSF1Q10570 1443 aaKnown RBP16.46■□□□□ 0.23
COL18A1-203ENST00000359759 CCDC154A6NI56 674 aa16.46■□□□□ 0.23
COL18A1-203ENST00000359759 GTF2E2P29084 291 aaKnown RBP16.46■□□□□ 0.23
COL18A1-203ENST00000359759 CHRNA5P30532 468 aa16.46■□□□□ 0.23
COL18A1-203ENST00000359759 PPIDQ08752 370 aaKnown RBP16.46■□□□□ 0.23
COL18A1-203ENST00000359759 RNF145Q96MT1 663 aa16.46■□□□□ 0.23
COL18A1-203ENST00000359759 ELOVL6Q9H5J4 265 aa16.46■□□□□ 0.23
COL18A1-203ENST00000359759 ENTPD7Q9NQZ7 604 aa16.46■□□□□ 0.23
COL18A1-203ENST00000359759 AGPAT3Q9NRZ7 376 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms