RNA–Protein interactions for RNA: ENST00000359680.9

TRAPPC2-201, Transcript of trafficking protein particle complex 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-201ENST00000359680 KLC2Q9H0B6 622 aa10.29□□□□□ -0.76
TRAPPC2-201ENST00000359680 Q9H521 79 aa10.29□□□□□ -0.76
TRAPPC2-201ENST00000359680 RAVER2Q9HCJ3 691 aaKnown RBP10.29□□□□□ -0.76
TRAPPC2-201ENST00000359680 POMPQ9Y244 141 aa10.29□□□□□ -0.76
TRAPPC2-201ENST00000359680 DTNAQ9Y4J8 743 aa10.29□□□□□ -0.76
TRAPPC2-201ENST00000359680 KCNN4O15554 427 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 HNRNPRO43390 633 aaKnown RBP10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 AP1G1O43747 822 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 PEX1O43933 1283 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 PFDN1O60925 122 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 LYPLA1O75608 230 aaPredicted RBP10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 SORBS2O94875 1100 aaKnown RBP10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 CLPTM1O96005 669 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 CST3P01034 146 aaPredicted RBP10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 PSAPP07602 524 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 MIPP30301 263 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 RPL5P46777 297 aaKnown RBP10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 SERPINB9P50453 376 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 YWHAEP62258 255 aaKnown RBP10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 DEUP1Q05D60 604 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 USP4Q13107 963 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 TFDP2Q14188 446 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 MYBPC3Q14896 1274 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 TAF5Q15542 800 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 SEZ6Q53EL9 994 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 TCHHL1Q5QJ38 904 aaPredicted RBP10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 FAXCQ5TGI0 409 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 PGM2L1Q6PCE3 622 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 B3GNT6Q6ZMB0 384 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 SCARA5Q6ZMJ2 495 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 RTKN2Q8IZC4 609 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 CMASQ8NFW8 434 aaPredicted RBP10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 TFAP2BQ92481 460 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 NGLY1Q96IV0 654 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 FAM96AQ9H5X1 160 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 PDLIM7Q9NR12 457 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 SMYD2Q9NRG4 433 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 MAP3K20Q9NYL2 800 aaKnown RBP10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 CTDP1Q9Y5B0 961 aaPredicted RBP10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 SF3B1O75533 1304 aaKnown RBP eCLIP10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 CNTNAP2Q9UHC6 1331 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 ANKRD31Q8N7Z5 1873 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 CLRN2A0PK11 232 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 STK10O94804 968 aaKnown RBP10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 APRTP07741 180 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 SLC1A6P48664 564 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 CDH6P55285 790 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 MYL6P60660 151 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 TBL3Q12788 808 aaKnown RBP10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 MMRN1Q13201 1228 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 TUBB3Q13509 450 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 EMC2Q15006 297 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 DBN1Q16643 649 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 DENND1BQ6P3S1 775 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 FBXL19Q6PCT2 694 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 C1orf228Q6PIY5 440 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 RBM44Q6ZP01 1051 aaKnown RBP10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 DEPDC1BQ8WUY9 529 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 C8orf37Q96NL8 207 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 DHX33Q9H6R0 707 aaKnown RBP10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 NRDE2Q9H7Z3 1164 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 IFT122Q9HBG6 1241 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 PXMP2Q9NR77 195 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 TJP2Q9UDY2 1190 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 FBXO40Q9UH90 709 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 USP18Q9UMW8 372 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 INPP5FQ9Y2H2 1132 aa10.28□□□□□ -0.76
TRAPPC2-201ENST00000359680 CAPN8A6NHC0 703 aa10.27□□□□□ -0.76
TRAPPC2-201ENST00000359680 CASQ2O14958 399 aaPredicted RBP10.27□□□□□ -0.76
TRAPPC2-201ENST00000359680 ITM2AO43736 263 aa10.27□□□□□ -0.76
TRAPPC2-201ENST00000359680 STBD1O95210 358 aa10.27□□□□□ -0.76
TRAPPC2-201ENST00000359680 TRUB2O95900 331 aaKnown RBP10.27□□□□□ -0.76
TRAPPC2-201ENST00000359680 NCF2P19878 526 aaPredicted RBP10.27□□□□□ -0.76
TRAPPC2-201ENST00000359680 FDFT1P37268 417 aa10.27□□□□□ -0.76
TRAPPC2-201ENST00000359680 AP3M2P53677 418 aa10.27□□□□□ -0.76
TRAPPC2-201ENST00000359680 RPL10AP62906 217 aaKnown RBP10.27□□□□□ -0.76
TRAPPC2-201ENST00000359680 GHRHRQ02643 423 aa10.27□□□□□ -0.76
TRAPPC2-201ENST00000359680 TRPC3Q13507 836 aa10.27□□□□□ -0.76
TRAPPC2-201ENST00000359680 TTLL12Q14166 644 aaPredicted RBP10.27□□□□□ -0.76
TRAPPC2-201ENST00000359680 HSP90AA5PQ58FG0 334 aa10.27□□□□□ -0.76
TRAPPC2-201ENST00000359680 FAM47CQ5HY64 1035 aa10.27□□□□□ -0.76
TRAPPC2-201ENST00000359680 FAM182AQ5T1J6 154 aa10.27□□□□□ -0.76
TRAPPC2-201ENST00000359680 PDPK2PQ6A1A2 396 aa10.27□□□□□ -0.76
TRAPPC2-201ENST00000359680 SCARA3Q6AZY7 606 aa10.27□□□□□ -0.76
TRAPPC2-201ENST00000359680 UNC5AQ6ZN44 842 aa10.27□□□□□ -0.76
TRAPPC2-201ENST00000359680 RSPH3Q86UC2 560 aa10.27□□□□□ -0.76
TRAPPC2-201ENST00000359680 NCAPG2Q86XI2 1143 aa10.27□□□□□ -0.76
TRAPPC2-201ENST00000359680 HPS6Q86YV9 775 aa10.27□□□□□ -0.76
TRAPPC2-201ENST00000359680 FBXW8Q8N3Y1 598 aa10.27□□□□□ -0.76
TRAPPC2-201ENST00000359680 MIPOL1Q8TD10 442 aa10.27□□□□□ -0.76
TRAPPC2-201ENST00000359680 TMEM143Q96AN5 459 aa10.27□□□□□ -0.76
TRAPPC2-201ENST00000359680 LRRC39Q96DD0 335 aa10.27□□□□□ -0.76
TRAPPC2-201ENST00000359680 PRICKLE1Q96MT3 831 aaPredicted RBP10.27□□□□□ -0.76
TRAPPC2-201ENST00000359680 LOC100653049A0A140TA62 436 aa10.27□□□□□ -0.77
TRAPPC2-201ENST00000359680 SLC15A5A6NIM6 579 aa10.27□□□□□ -0.77
TRAPPC2-201ENST00000359680 MED7O43513 233 aa10.27□□□□□ -0.77
TRAPPC2-201ENST00000359680 STRNO43815 780 aa10.27□□□□□ -0.77
TRAPPC2-201ENST00000359680 KRT34O76011 436 aa10.27□□□□□ -0.77
TRAPPC2-201ENST00000359680 TOP3BO95985 862 aaKnown RBP10.27□□□□□ -0.77
TRAPPC2-201ENST00000359680 ZBED1O96006 694 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms