RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 TJP3O95049 919 aa13.17□□□□□ -0.3
GGPS1-202ENST00000358966 PAX3P23760 479 aa13.17□□□□□ -0.3
GGPS1-202ENST00000358966 ADCY1Q08828 1119 aa13.17□□□□□ -0.3
GGPS1-202ENST00000358966 ZRSR2Q15696 482 aaKnown RBP13.17□□□□□ -0.3
GGPS1-202ENST00000358966 DCAF6Q58WW2 860 aa13.17□□□□□ -0.3
GGPS1-202ENST00000358966 MFN1Q8IWA4 741 aa13.17□□□□□ -0.3
GGPS1-202ENST00000358966 TRIM42Q8IWZ5 723 aa13.17□□□□□ -0.3
GGPS1-202ENST00000358966 NSMCE1Q8WV22 266 aa13.17□□□□□ -0.3
GGPS1-202ENST00000358966 TBCBQ99426 244 aa13.17□□□□□ -0.3
GGPS1-202ENST00000358966 DDX23Q9BUQ8 820 aaKnown RBP13.17□□□□□ -0.3
GGPS1-202ENST00000358966 SNRNP25Q9BV90 132 aaKnown RBP13.17□□□□□ -0.3
GGPS1-202ENST00000358966 DUSP16Q9BY84 665 aa13.17□□□□□ -0.3
GGPS1-202ENST00000358966 C9IYK1 514 aa13.17□□□□□ -0.3
GGPS1-202ENST00000358966 KBTBD13C9JR72 458 aa13.17□□□□□ -0.3
GGPS1-202ENST00000358966 AMHP03971 560 aa13.17□□□□□ -0.3
GGPS1-202ENST00000358966 KRT7P08729 469 aa13.17□□□□□ -0.3
GGPS1-202ENST00000358966 BDNFP23560 247 aa13.17□□□□□ -0.3
GGPS1-202ENST00000358966 MAGEA10P43363 369 aaPredicted RBP13.17□□□□□ -0.3
GGPS1-202ENST00000358966 CCL23P55773 120 aa13.17□□□□□ -0.3
GGPS1-202ENST00000358966 GAD2Q05329 585 aa13.17□□□□□ -0.3
GGPS1-202ENST00000358966 NNTQ13423 1086 aa13.17□□□□□ -0.3
GGPS1-202ENST00000358966 CLUL1Q15846 466 aa13.17□□□□□ -0.3
GGPS1-202ENST00000358966 PPP2R5EQ16537 467 aa13.17□□□□□ -0.3
GGPS1-202ENST00000358966 CCNG2Q16589 344 aa13.17□□□□□ -0.3
GGPS1-202ENST00000358966 C1orf228Q6PIY5 440 aa13.17□□□□□ -0.3
GGPS1-202ENST00000358966 POLNQ7Z5Q5 900 aa13.17□□□□□ -0.3
GGPS1-202ENST00000358966 FAM35AQ86V20 835 aa13.17□□□□□ -0.3
GGPS1-202ENST00000358966 DEFB106AQ8N104 65 aa13.17□□□□□ -0.3
GGPS1-202ENST00000358966 ATL2Q8NHH9 583 aa13.17□□□□□ -0.3
GGPS1-202ENST00000358966 HNRNPABQ99729 332 aaKnown RBP13.17□□□□□ -0.3
GGPS1-202ENST00000358966 SLX1AQ9BQ83 275 aa13.17□□□□□ -0.3
GGPS1-202ENST00000358966 PPP1R12CQ9BZL4 782 aa13.17□□□□□ -0.3
GGPS1-202ENST00000358966 AAASQ9NRG9 546 aa13.17□□□□□ -0.3
GGPS1-202ENST00000358966 NEU2Q9Y3R4 380 aa13.17□□□□□ -0.3
GGPS1-202ENST00000358966 PDE4DIPQ5VU43 2346 aa13.16□□□□□ -0.3
GGPS1-202ENST00000358966 SGK1O00141 431 aa13.16□□□□□ -0.3
GGPS1-202ENST00000358966 USP17L7P0C7H9 530 aa13.16□□□□□ -0.3
GGPS1-202ENST00000358966 SCNN1BP51168 640 aa13.16□□□□□ -0.3
GGPS1-202ENST00000358966 TKTL1P51854 596 aa13.16□□□□□ -0.3
GGPS1-202ENST00000358966 DPYSL3Q14195 570 aa13.16□□□□□ -0.3
GGPS1-202ENST00000358966 P3H1Q32P28 736 aa13.16□□□□□ -0.3
GGPS1-202ENST00000358966 FAM26DQ5JW98 314 aa13.16□□□□□ -0.3
GGPS1-202ENST00000358966 LRRC8DQ7L1W4 858 aa13.16□□□□□ -0.3
GGPS1-202ENST00000358966 ARHGAP22Q7Z5H3 698 aa13.16□□□□□ -0.3
GGPS1-202ENST00000358966 SPATS2Q86XZ4 545 aaKnown RBP13.16□□□□□ -0.3
GGPS1-202ENST00000358966 MYLPFQ96A32 169 aa13.16□□□□□ -0.3
GGPS1-202ENST00000358966 ULBP1Q9BZM6 244 aa13.16□□□□□ -0.3
GGPS1-202ENST00000358966 RNF208Q9H0X6 261 aa13.16□□□□□ -0.3
GGPS1-202ENST00000358966 YJEFN3A6XGL0 299 aa13.16□□□□□ -0.3
GGPS1-202ENST00000358966 DCDC2CA8MYV0 355 aa13.16□□□□□ -0.3
GGPS1-202ENST00000358966 NT5C1B-RDH14C9J2C7 533 aa13.16□□□□□ -0.3
GGPS1-202ENST00000358966 E7ENQ6 273 aa13.16□□□□□ -0.3
GGPS1-202ENST00000358966 GOLGA8MH3BSY2 632 aa13.16□□□□□ -0.3
GGPS1-202ENST00000358966 FAM200BP0CF97 657 aa13.16□□□□□ -0.3
GGPS1-202ENST00000358966 OR1G1P47890 313 aa13.16□□□□□ -0.3
GGPS1-202ENST00000358966 NME3Q13232 169 aa13.16□□□□□ -0.3
GGPS1-202ENST00000358966 TUSC3Q13454 348 aa13.16□□□□□ -0.3
GGPS1-202ENST00000358966 ZNF365Q70YC5 407 aa13.16□□□□□ -0.3
GGPS1-202ENST00000358966 YTHDF3Q7Z739 585 aaKnown RBP13.16□□□□□ -0.3
GGPS1-202ENST00000358966 REM2Q8IYK8 340 aaPredicted RBP13.16□□□□□ -0.3
GGPS1-202ENST00000358966 EDEM1Q92611 657 aa13.16□□□□□ -0.3
GGPS1-202ENST00000358966 PAPOLBQ9NRJ5 636 aaKnown RBP13.16□□□□□ -0.3
GGPS1-202ENST00000358966 DDX56Q9NY93 547 aaKnown RBP13.16□□□□□ -0.3
GGPS1-202ENST00000358966 NAALADL1Q9UQQ1 740 aa13.16□□□□□ -0.3
GGPS1-202ENST00000358966 HEY1Q9Y5J3 304 aa13.16□□□□□ -0.3
GGPS1-202ENST00000358966 TSC2P49815 1807 aa13.15□□□□□ -0.3
GGPS1-202ENST00000358966 MYO18AQ92614 2054 aaKnown RBP13.15□□□□□ -0.3
GGPS1-202ENST00000358966 A0A1B0GVG6 124 aa13.15□□□□□ -0.3
GGPS1-202ENST00000358966 H0YGN5 161 aa13.15□□□□□ -0.3
GGPS1-202ENST00000358966 XPO1O14980 1071 aaKnown RBP13.15□□□□□ -0.3
GGPS1-202ENST00000358966 BANF1O75531 89 aa13.15□□□□□ -0.3
GGPS1-202ENST00000358966 GAS8O95995 478 aa13.15□□□□□ -0.3
GGPS1-202ENST00000358966 ATF2P15336 505 aa13.15□□□□□ -0.3
GGPS1-202ENST00000358966 IL4RP24394 825 aa13.15□□□□□ -0.3
GGPS1-202ENST00000358966 ARSEP51690 589 aa13.15□□□□□ -0.3
GGPS1-202ENST00000358966 ZNF844Q08AG5 666 aa13.15□□□□□ -0.3
GGPS1-202ENST00000358966 OTUD1Q5VV17 481 aaPredicted RBP13.15□□□□□ -0.3
GGPS1-202ENST00000358966 SLC26A9Q7LBE3 791 aa13.15□□□□□ -0.3
GGPS1-202ENST00000358966 FAM126BQ8IXS8 530 aa13.15□□□□□ -0.3
GGPS1-202ENST00000358966 MREGQ8N565 214 aa13.15□□□□□ -0.3
GGPS1-202ENST00000358966 CMASQ8NFW8 434 aaPredicted RBP13.15□□□□□ -0.3
GGPS1-202ENST00000358966 RSPH1Q8WYR4 309 aa13.15□□□□□ -0.3
GGPS1-202ENST00000358966 TBC1D31Q96DN5 1066 aa13.15□□□□□ -0.3
GGPS1-202ENST00000358966 LRRC4Q9HBW1 653 aa13.15□□□□□ -0.3
GGPS1-202ENST00000358966 NFS1Q9Y697 457 aa13.15□□□□□ -0.3
GGPS1-202ENST00000358966 BPTFQ12830 3046 aa13.15□□□□□ -0.3
GGPS1-202ENST00000358966 ACSL3O95573 720 aa13.15□□□□□ -0.3
GGPS1-202ENST00000358966 CETN2P41208 172 aa13.15□□□□□ -0.3
GGPS1-202ENST00000358966 SLCO1A2P46721 670 aa13.15□□□□□ -0.3
GGPS1-202ENST00000358966 RNASELQ05823 741 aaKnown RBP13.15□□□□□ -0.3
GGPS1-202ENST00000358966 CALCOCO2Q13137 446 aa13.15□□□□□ -0.3
GGPS1-202ENST00000358966 PTK6Q13882 451 aa13.15□□□□□ -0.3
GGPS1-202ENST00000358966 KRT81Q14533 505 aa13.15□□□□□ -0.3
GGPS1-202ENST00000358966 OASLQ15646 514 aaKnown RBP13.15□□□□□ -0.3
GGPS1-202ENST00000358966 SDHAF4Q5VUM1 108 aa13.15□□□□□ -0.3
GGPS1-202ENST00000358966 MICALCLQ6ZW33 695 aa13.15□□□□□ -0.3
GGPS1-202ENST00000358966 SLC24A5Q71RS6 500 aa13.15□□□□□ -0.3
GGPS1-202ENST00000358966 UNC45BQ8IWX7 931 aa13.15□□□□□ -0.3
GGPS1-202ENST00000358966 SLC43A3Q8NBI5 491 aa13.15□□□□□ -0.3
GGPS1-202ENST00000358966 SCAMP5Q8TAC9 235 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms