RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 NUDT17P0C025 328 aa14.13□□□□□ -0.15
VCP-201ENST00000358901 ATP6V1E1P36543 226 aa14.13□□□□□ -0.15
VCP-201ENST00000358901 CNTN2Q02246 1040 aa14.13□□□□□ -0.15
VCP-201ENST00000358901 LRRC74AQ0VAA2 488 aa14.13□□□□□ -0.15
VCP-201ENST00000358901 ARSHQ5FYA8 562 aa14.13□□□□□ -0.15
VCP-201ENST00000358901 FBXO47Q5MNV8 452 aa14.13□□□□□ -0.15
VCP-201ENST00000358901 KCNT2Q6UVM3 1135 aa14.13□□□□□ -0.15
VCP-201ENST00000358901 RRM2BQ7LG56 351 aa14.13□□□□□ -0.15
VCP-201ENST00000358901 TDRD5Q8NAT2 981 aaKnown RBP14.13□□□□□ -0.15
VCP-201ENST00000358901 KLHL4Q9C0H6 718 aa14.13□□□□□ -0.15
VCP-201ENST00000358901 HSD3B7Q9H2F3 369 aa14.13□□□□□ -0.15
VCP-201ENST00000358901 E7ENQ6 273 aa14.13□□□□□ -0.15
VCP-201ENST00000358901 M0R3G1 203 aa14.13□□□□□ -0.15
VCP-201ENST00000358901 CLASP2O75122 1294 aaKnown RBP14.13□□□□□ -0.15
VCP-201ENST00000358901 SOAT2O75908 522 aa14.13□□□□□ -0.15
VCP-201ENST00000358901 PSMA4P25789 261 aaKnown RBP14.13□□□□□ -0.15
VCP-201ENST00000358901 FLT3P36888 993 aa14.13□□□□□ -0.15
VCP-201ENST00000358901 TRPC1P48995 793 aa14.13□□□□□ -0.15
VCP-201ENST00000358901 SLC26A2P50443 739 aa14.13□□□□□ -0.15
VCP-201ENST00000358901 MAP3K7CLP57077 242 aa14.13□□□□□ -0.15
VCP-201ENST00000358901 AGKQ53H12 422 aa14.13□□□□□ -0.15
VCP-201ENST00000358901 TCHHL1Q5QJ38 904 aaPredicted RBP14.13□□□□□ -0.15
VCP-201ENST00000358901 ADCK1Q86TW2 530 aa14.13□□□□□ -0.15
VCP-201ENST00000358901 SNRNP27Q8WVK2 155 aaKnown RBP14.13□□□□□ -0.15
VCP-201ENST00000358901 NMD3Q96D46 503 aaKnown RBP14.13□□□□□ -0.15
VCP-201ENST00000358901 PRPF18Q99633 342 aaKnown RBP14.13□□□□□ -0.15
VCP-201ENST00000358901 OSMRQ99650 979 aa14.13□□□□□ -0.15
VCP-201ENST00000358901 TRPC7Q9HCX4 862 aa14.13□□□□□ -0.15
VCP-201ENST00000358901 SLCO1B3Q9NPD5 702 aa14.13□□□□□ -0.15
VCP-201ENST00000358901 NDUFA13Q9P0J0 144 aa14.13□□□□□ -0.15
VCP-201ENST00000358901 ZNF212Q9UDV6 495 aa14.13□□□□□ -0.15
VCP-201ENST00000358901 FAM198AQ9UFP1 575 aa14.13□□□□□ -0.15
VCP-201ENST00000358901 H3BRB1 525 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 OPLAHO14841 1288 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 DEAF1O75398 565 aaPredicted RBP14.12□□□□□ -0.15
VCP-201ENST00000358901 PDE5AO76074 875 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 SLC1A6P48664 564 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 CSE1LP55060 971 aaKnown RBP14.12□□□□□ -0.15
VCP-201ENST00000358901 BST2Q10589 180 aaKnown RBP14.12□□□□□ -0.15
VCP-201ENST00000358901 MAMLD1Q13495 774 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 DPYSL3Q14195 570 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 POU6F1Q14863 301 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 CCDC85BQ15834 202 aaPredicted RBP14.12□□□□□ -0.15
VCP-201ENST00000358901 SLC15A2Q16348 729 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 NAIF1Q69YI7 327 aaPredicted RBP14.12□□□□□ -0.15
VCP-201ENST00000358901 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.12□□□□□ -0.15
VCP-201ENST00000358901 JADE3Q92613 823 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 FAM162AQ96A26 154 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 AKT1S1Q96B36 256 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 CELF6Q96J87 481 aaKnown RBP14.12□□□□□ -0.15
VCP-201ENST00000358901 FAM84AQ96KN4 292 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 C17orf80Q9BSJ5 609 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 UBE2OQ9C0C9 1292 aaKnown RBP14.12□□□□□ -0.15
VCP-201ENST00000358901 TUT1Q9H6E5 874 aaKnown RBP14.12□□□□□ -0.15
VCP-201ENST00000358901 LRRC19Q9H756 370 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 DDX28Q9NUL7 540 aaKnown RBP14.12□□□□□ -0.15
VCP-201ENST00000358901 FARP1Q9Y4F1 1045 aaPredicted RBP14.12□□□□□ -0.15
VCP-201ENST00000358901 WDR27A2RRH5 827 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 MEI4A8MW99 385 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 DCXO43602 365 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 KDM1AO60341 852 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 MGAT1P26572 445 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 CHKAP35790 457 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 GTF2BQ00403 316 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 HGSNATQ68CP4 663 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 CCDC60Q8IWA6 550 aaPredicted RBP14.12□□□□□ -0.15
VCP-201ENST00000358901 CERS5Q8N5B7 392 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 HTR3CQ8WXA8 447 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 CCDC126Q96EE4 140 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 SLITRK1Q96PX8 696 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 GPBP1L1Q9HC44 474 aaPredicted RBP14.12□□□□□ -0.15
VCP-201ENST00000358901 GPAMQ9HCL2 828 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 IQCA1LA6NCM1 817 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 SRRM3A6NNA2 597 aaPredicted RBP14.12□□□□□ -0.15
VCP-201ENST00000358901 ACKR2O00590 384 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 TRIM13O60858 407 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 MICAL2O94851 1124 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 TGFB3P10600 412 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 TKTL1P51854 596 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 C16orf46Q6P387 395 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 LRRC8BQ6P9F7 803 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 SLC9A9Q8IVB4 645 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 MICU2Q8IYU8 434 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 KYQ8NBH2 561 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 FAR2Q96K12 515 aa14.12□□□□□ -0.15
VCP-201ENST00000358901 NCANO14594 1321 aa14.11□□□□□ -0.15
VCP-201ENST00000358901 A0A096LPK6 155 aa14.11□□□□□ -0.15
VCP-201ENST00000358901 E5RJQ4 531 aa14.11□□□□□ -0.15
VCP-201ENST00000358901 USP12O75317 370 aa14.11□□□□□ -0.15
VCP-201ENST00000358901 CYP1A2P05177 515 aa14.11□□□□□ -0.15
VCP-201ENST00000358901 ZNF23P17027 643 aa14.11□□□□□ -0.15
VCP-201ENST00000358901 EFL1Q7Z2Z2 1120 aaKnown RBP14.11□□□□□ -0.15
VCP-201ENST00000358901 TMEM161BQ8NDZ6 487 aa14.11□□□□□ -0.15
VCP-201ENST00000358901 LZICQ8WZA0 190 aa14.11□□□□□ -0.15
VCP-201ENST00000358901 BHMTQ93088 406 aa14.11□□□□□ -0.15
VCP-201ENST00000358901 DDX50Q9BQ39 737 aaKnown RBP14.11□□□□□ -0.15
VCP-201ENST00000358901 RNPEPL1Q9HAU8 725 aa14.11□□□□□ -0.15
VCP-201ENST00000358901 SALL4Q9UJQ4 1053 aa14.11□□□□□ -0.15
VCP-201ENST00000358901 FAM32AQ9Y421 112 aaKnown RBP14.11□□□□□ -0.15
VCP-201ENST00000358901 SHPRHQ149N8 1683 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms