RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 SESTD1Q86VW0 696 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 CDKL3Q8IVW4 592 aaPredicted RBP8.91□□□□□ -0.98
RFX3-202ENST00000358730 CCDC33Q8N5R6 958 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 ENDOVQ8N8Q3 282 aaKnown RBP8.91□□□□□ -0.98
RFX3-202ENST00000358730 ARMC2Q8NEN0 867 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 MCUR1Q96AQ8 359 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 OXNAD1Q96HP4 312 aaPredicted RBP8.91□□□□□ -0.98
RFX3-202ENST00000358730 MRPL45Q9BRJ2 306 aaKnown RBP8.91□□□□□ -0.98
RFX3-202ENST00000358730 TRIM56Q9BRZ2 755 aaKnown RBP8.91□□□□□ -0.98
RFX3-202ENST00000358730 BTBD10Q9BSF8 475 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 B3GNT5Q9BYG0 378 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 PLAC1Q9HBJ0 212 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 SMYD2Q9NRG4 433 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 PCMTD2Q9NV79 361 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 RBPJLQ9UBG7 517 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 RPL26L1Q9UNX3 145 aaKnown RBP8.91□□□□□ -0.98
RFX3-202ENST00000358730 SNX9Q9Y5X1 595 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 FAM237BA0A1B0GVD1 139 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 E7ENQ6 273 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 MDM4O15151 490 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 LUC7L3O95232 432 aaKnown RBP8.91□□□□□ -0.98
RFX3-202ENST00000358730 TFE3P19532 575 aaPredicted RBP8.91□□□□□ -0.98
RFX3-202ENST00000358730 IREB2P48200 963 aaKnown RBP8.91□□□□□ -0.98
RFX3-202ENST00000358730 MRPS5P82675 430 aaKnown RBP8.91□□□□□ -0.98
RFX3-202ENST00000358730 TMPRSS15P98073 1019 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 SLC6A3Q01959 620 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 ARHGAP1Q07960 439 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 UNC5AQ6ZN44 842 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 C4orf50Q6ZRC1 276 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 IFNLR1Q8IU57 520 aaPredicted RBP8.91□□□□□ -0.98
RFX3-202ENST00000358730 SULF1Q8IWU6 871 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 NAF1Q96HR8 494 aaKnown RBP8.91□□□□□ -0.98
RFX3-202ENST00000358730 NSL1Q96IY1 281 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 ANKRD27Q96NW4 1050 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 TUBB6Q9BUF5 446 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 DHX35Q9H5Z1 703 aaKnown RBP8.91□□□□□ -0.98
RFX3-202ENST00000358730 NRDE2Q9H7Z3 1164 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 ARMCX1Q9P291 453 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 HESX1Q9UBX0 185 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 PLLPQ9Y342 182 aa8.91□□□□□ -0.98
RFX3-202ENST00000358730 A6NJR5 290 aa8.9□□□□□ -0.98
RFX3-202ENST00000358730 FCHO1O14526 889 aa8.9□□□□□ -0.98
RFX3-202ENST00000358730 KLF11O14901 512 aa8.9□□□□□ -0.98
RFX3-202ENST00000358730 PAPSS1O43252 624 aaPredicted RBP8.9□□□□□ -0.98
RFX3-202ENST00000358730 KRT38O76015 456 aa8.9□□□□□ -0.98
RFX3-202ENST00000358730 STAU1O95793 577 aaKnown RBP8.9□□□□□ -0.98
RFX3-202ENST00000358730 IL1BP01584 269 aa8.9□□□□□ -0.98
RFX3-202ENST00000358730 ESRRAP11474 423 aaPredicted RBP8.9□□□□□ -0.98
RFX3-202ENST00000358730 CCNFP41002 786 aa8.9□□□□□ -0.98
RFX3-202ENST00000358730 MAGEA6P43360 314 aa8.9□□□□□ -0.98
RFX3-202ENST00000358730 SESN3P58005 492 aa8.9□□□□□ -0.98
RFX3-202ENST00000358730 GBE1Q04446 702 aa8.9□□□□□ -0.98
RFX3-202ENST00000358730 BST1Q10588 318 aa8.9□□□□□ -0.98
RFX3-202ENST00000358730 TRMT10BQ6PF06 316 aaKnown RBP8.9□□□□□ -0.98
RFX3-202ENST00000358730 DSTYKQ6XUX3 929 aa8.9□□□□□ -0.98
RFX3-202ENST00000358730 ALYREFQ86V81 257 aaKnown RBP8.9□□□□□ -0.98
RFX3-202ENST00000358730 MPP5Q8N3R9 675 aa8.9□□□□□ -0.98
RFX3-202ENST00000358730 LINC01465Q8N7H1 131 aa8.9□□□□□ -0.98
RFX3-202ENST00000358730 GSDMBQ8TAX9 411 aa8.9□□□□□ -0.98
RFX3-202ENST00000358730 USP6NLQ92738 828 aa8.9□□□□□ -0.98
RFX3-202ENST00000358730 LRRC39Q96DD0 335 aa8.9□□□□□ -0.98
RFX3-202ENST00000358730 FAM167BQ9BTA0 163 aa8.9□□□□□ -0.98
RFX3-202ENST00000358730 NMUR2Q9GZQ4 415 aa8.9□□□□□ -0.98
RFX3-202ENST00000358730 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.9□□□□□ -0.98
RFX3-202ENST00000358730 SUFUQ9UMX1 484 aa8.9□□□□□ -0.98
RFX3-202ENST00000358730 MYO18AQ92614 2054 aaKnown RBP8.9□□□□□ -0.98
RFX3-202ENST00000358730 PCNTO95613 3336 aa8.9□□□□□ -0.98
RFX3-202ENST00000358730 TRDMT1O14717 391 aaKnown RBP8.9□□□□□ -0.99
RFX3-202ENST00000358730 PPEF2O14830 753 aa8.9□□□□□ -0.99
RFX3-202ENST00000358730 RFPL1O75677 317 aa8.9□□□□□ -0.99
RFX3-202ENST00000358730 METTL18O95568 372 aa8.9□□□□□ -0.99
RFX3-202ENST00000358730 PTDSS1P48651 473 aaKnown RBP8.9□□□□□ -0.99
RFX3-202ENST00000358730 ATXN1P54253 815 aaKnown RBP8.9□□□□□ -0.99
RFX3-202ENST00000358730 CHI3L2Q15782 390 aa8.9□□□□□ -0.99
RFX3-202ENST00000358730 PKDCCQ504Y2 493 aa8.9□□□□□ -0.99
RFX3-202ENST00000358730 MROH9Q5TGP6 573 aa8.9□□□□□ -0.99
RFX3-202ENST00000358730 ZNF534Q76KX8 674 aa8.9□□□□□ -0.99
RFX3-202ENST00000358730 ARMCX2Q7L311 632 aa8.9□□□□□ -0.99
RFX3-202ENST00000358730 APBB1IPQ7Z5R6 666 aaPredicted RBP8.9□□□□□ -0.99
RFX3-202ENST00000358730 ERO1BQ86YB8 467 aa8.9□□□□□ -0.99
RFX3-202ENST00000358730 TRIM42Q8IWZ5 723 aa8.9□□□□□ -0.99
RFX3-202ENST00000358730 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.9□□□□□ -0.99
RFX3-202ENST00000358730 DEPDC1BQ8WUY9 529 aa8.9□□□□□ -0.99
RFX3-202ENST00000358730 KHSRPQ92945 711 aaKnown RBP eCLIP8.9□□□□□ -0.99
RFX3-202ENST00000358730 DCPSQ96C86 337 aaKnown RBP8.9□□□□□ -0.99
RFX3-202ENST00000358730 SLC4A5Q9BY07 1137 aa8.9□□□□□ -0.99
RFX3-202ENST00000358730 FAM124BQ9H5Z6 455 aaPredicted RBP8.9□□□□□ -0.99
RFX3-202ENST00000358730 DCLRE1BQ9H816 532 aa8.9□□□□□ -0.99
RFX3-202ENST00000358730 MARCOQ9UEW3 520 aaPredicted RBP8.9□□□□□ -0.99
RFX3-202ENST00000358730 F5H423 210 aaPredicted RBP8.89□□□□□ -0.99
RFX3-202ENST00000358730 CYB561D2O14569 222 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 GSC2O15499 205 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 LMNAP02545 664 aaKnown RBP8.89□□□□□ -0.99
RFX3-202ENST00000358730 SETSIPP0DME0 302 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 MAGEA3P43357 314 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 KRT72Q14CN4 511 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 KHDC1Q4VXA5 237 aaKnown RBP8.89□□□□□ -0.99
RFX3-202ENST00000358730 ATG16L1Q676U5 607 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 RINLQ6ZS11 566 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 MOB2Q70IA6 237 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms