RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 ADARB2Q9NS39 739 aaKnown RBP12.1□□□□□ -0.47
COL9A1-202ENST00000357250 TSR3Q9UJK0 312 aaKnown RBP12.1□□□□□ -0.47
COL9A1-202ENST00000357250 A0A1B0GW55 424 aa12.1□□□□□ -0.47
COL9A1-202ENST00000357250 FAM86B1E9PN63 330 aa12.1□□□□□ -0.47
COL9A1-202ENST00000357250 USP1O94782 785 aa12.1□□□□□ -0.47
COL9A1-202ENST00000357250 WDR47O94967 919 aa12.1□□□□□ -0.47
COL9A1-202ENST00000357250 FAM86B2P0C5J1 330 aa12.1□□□□□ -0.47
COL9A1-202ENST00000357250 DUX4L2P0CJ85 424 aa12.1□□□□□ -0.47
COL9A1-202ENST00000357250 DUX4L3P0CJ86 424 aa12.1□□□□□ -0.47
COL9A1-202ENST00000357250 DUX4L4P0CJ87 422 aa12.1□□□□□ -0.47
COL9A1-202ENST00000357250 DUX4L5P0CJ88 424 aa12.1□□□□□ -0.47
COL9A1-202ENST00000357250 DUX4L6P0CJ89 424 aa12.1□□□□□ -0.47
COL9A1-202ENST00000357250 DUX4L7P0CJ90 424 aa12.1□□□□□ -0.47
COL9A1-202ENST00000357250 GP5P40197 560 aa12.1□□□□□ -0.47
COL9A1-202ENST00000357250 CLCN3P51790 818 aa12.1□□□□□ -0.47
COL9A1-202ENST00000357250 KRR1Q13601 381 aaKnown RBP12.1□□□□□ -0.47
COL9A1-202ENST00000357250 PCSK9Q8NBP7 692 aaKnown RBP12.1□□□□□ -0.47
COL9A1-202ENST00000357250 PHF21AQ96BD5 680 aa12.1□□□□□ -0.47
COL9A1-202ENST00000357250 GDF3Q9NR23 364 aa12.1□□□□□ -0.47
COL9A1-202ENST00000357250 PDGFCQ9NRA1 345 aa12.1□□□□□ -0.47
COL9A1-202ENST00000357250 DUX4Q9UBX2 424 aa12.1□□□□□ -0.47
COL9A1-202ENST00000357250 ATP11BQ9Y2G3 1177 aa12.1□□□□□ -0.47
COL9A1-202ENST00000357250 BTNL10A8MVZ5 291 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 TM4SF1P30408 202 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 EIF2B5Q13144 721 aaKnown RBP12.09□□□□□ -0.47
COL9A1-202ENST00000357250 ERMARDQ5T6L9 678 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 PRMT9Q6P2P2 845 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 MYO1HQ8N1T3 1032 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 GLIS3Q8NEA6 775 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 SLC20A1Q8WUM9 679 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 TMEM169Q96HH4 297 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 ABI2Q9NYB9 513 aaPredicted RBP12.09□□□□□ -0.47
COL9A1-202ENST00000357250 DLGAP2Q9P1A6 1054 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 NAALADL1Q9UQQ1 740 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 RUVBL2Q9Y230 463 aaKnown RBP12.09□□□□□ -0.47
COL9A1-202ENST00000357250 FMN2Q9NZ56 1722 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 PDE4DIPQ5VU43 2346 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 ACKR2O00590 384 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 TRDMT1O14717 391 aaKnown RBP12.09□□□□□ -0.47
COL9A1-202ENST00000357250 STRNO43815 780 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 SLITRK3O94933 977 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 TPBGLP0DKB5 382 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 TSHRP16473 764 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 ALDH7A1P49419 539 aaKnown RBP12.09□□□□□ -0.47
COL9A1-202ENST00000357250 NCKAP1LP55160 1127 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 OXCT1P55809 520 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 LAMTOR4Q0VGL1 99 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 CDH17Q12864 832 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 C2CD6Q53TS8 623 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 GRTP1Q5TC63 336 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 NT5DC3Q86UY8 548 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 ZNF410Q86VK4 478 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 TMPRSS6Q8IU80 811 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 GALNT4Q8N4A0 578 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 AENQ8WTP8 325 aaKnown RBP12.09□□□□□ -0.47
COL9A1-202ENST00000357250 FBXO32Q969P5 355 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 KCTD10Q9H3F6 313 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 STARD13Q9Y3M8 1113 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 IFNA14P01570 189 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 SERPINE1P05121 402 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 TKTP29401 623 aaKnown RBP12.09□□□□□ -0.47
COL9A1-202ENST00000357250 RENBPP51606 427 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 FBXW4P57775 412 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 RASA2Q15283 850 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 ADCK2Q7Z695 626 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 STRA8Q7Z7C7 330 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 TMEM121Q9BTD3 319 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 ADGRE3Q9BY15 652 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 KANSL3Q9P2N6 904 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 HMGCRP04035 888 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 OCM2P0CE71 109 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 OCMP0CE72 109 aaPredicted RBP12.09□□□□□ -0.47
COL9A1-202ENST00000357250 CDK16Q00536 496 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 LRRC74AQ0VAA2 488 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 FAXCQ5TGI0 409 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 LRRC38Q5VT99 294 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 C10orf88Q9H8K7 445 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 ANKRD6Q9Y2G4 727 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 DNAJC16Q9Y2G8 782 aa12.09□□□□□ -0.47
COL9A1-202ENST00000357250 ADGRA2Q96PE1 1338 aa12.08□□□□□ -0.48
COL9A1-202ENST00000357250 CSDE1O75534 798 aaKnown RBP12.08□□□□□ -0.48
COL9A1-202ENST00000357250 GSNP06396 782 aa12.08□□□□□ -0.48
COL9A1-202ENST00000357250 SERPINB3P29508 390 aa12.08□□□□□ -0.48
COL9A1-202ENST00000357250 AQP5P55064 265 aa12.08□□□□□ -0.48
COL9A1-202ENST00000357250 KCNT1Q5JUK3 1230 aa12.08□□□□□ -0.48
COL9A1-202ENST00000357250 SPANXN3Q5MJ09 141 aa12.08□□□□□ -0.48
COL9A1-202ENST00000357250 KATNAL2Q8IYT4 538 aa12.08□□□□□ -0.48
COL9A1-202ENST00000357250 BLOC1S5Q8TDH9 187 aa12.08□□□□□ -0.48
COL9A1-202ENST00000357250 UCMAQ8WVF2 138 aa12.08□□□□□ -0.48
COL9A1-202ENST00000357250 ASB2Q96Q27 587 aa12.08□□□□□ -0.48
COL9A1-202ENST00000357250 PURBQ96QR8 312 aaKnown RBP12.08□□□□□ -0.48
COL9A1-202ENST00000357250 APOL5Q9BWW9 433 aa12.08□□□□□ -0.48
COL9A1-202ENST00000357250 CLPBQ9H078 707 aa12.08□□□□□ -0.48
COL9A1-202ENST00000357250 VTA1Q9NP79 307 aa12.08□□□□□ -0.48
COL9A1-202ENST00000357250 BLOC1S4Q9NUP1 217 aa12.08□□□□□ -0.48
COL9A1-202ENST00000357250 ERI2A8K979 691 aaKnown RBP12.08□□□□□ -0.48
COL9A1-202ENST00000357250 CYP2F1P24903 491 aa12.08□□□□□ -0.48
COL9A1-202ENST00000357250 CRABP2P29373 138 aa12.08□□□□□ -0.48
COL9A1-202ENST00000357250 PPP3CCP48454 512 aa12.08□□□□□ -0.48
COL9A1-202ENST00000357250 PLOD1Q02809 727 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms