RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 SLC25A52Q3SY17 297 aa25.1■■□□□ 1.61
CHKA-202ENST00000356135 TMEM150AQ86TG1 271 aa25.1■■□□□ 1.61
CHKA-202ENST00000356135 CORO1BQ9BR76 489 aa25.1■■□□□ 1.61
CHKA-202ENST00000356135 IL21Q9HBE4 155 aa25.1■■□□□ 1.61
CHKA-202ENST00000356135 EHD2Q9NZN4 543 aa25.1■■□□□ 1.61
CHKA-202ENST00000356135 SFMBT1Q9UHJ3 866 aa25.1■■□□□ 1.61
CHKA-202ENST00000356135 ASB3Q9Y575 518 aa25.1■■□□□ 1.61
CHKA-202ENST00000356135 MYO9BQ13459 2157 aa25.1■■□□□ 1.61
CHKA-202ENST00000356135 CCDC195A0A1B0GUA6 201 aa25.1■■□□□ 1.61
CHKA-202ENST00000356135 SPDYE4A6NLX3 237 aa25.1■■□□□ 1.61
CHKA-202ENST00000356135 EFCAB8A8MWE9 144 aa25.1■■□□□ 1.61
CHKA-202ENST00000356135 M0QYT0 321 aa25.1■■□□□ 1.61
CHKA-202ENST00000356135 LINC01565O15544 149 aa25.1■■□□□ 1.61
CHKA-202ENST00000356135 TCP1P17987 556 aaKnown RBP25.1■■□□□ 1.61
CHKA-202ENST00000356135 PTPN9P43378 593 aa25.1■■□□□ 1.61
CHKA-202ENST00000356135 ADGRE1Q14246 886 aa25.1■■□□□ 1.61
CHKA-202ENST00000356135 TMC8Q8IU68 726 aa25.1■■□□□ 1.61
CHKA-202ENST00000356135 ARHGAP18Q8N392 663 aa25.1■■□□□ 1.61
CHKA-202ENST00000356135 NT5C3BQ969T7 300 aa25.1■■□□□ 1.61
CHKA-202ENST00000356135 CCSER2Q9H7U1 834 aa25.1■■□□□ 1.61
CHKA-202ENST00000356135 PCSK1NQ9UHG2 260 aa25.1■■□□□ 1.61
CHKA-202ENST00000356135 SZT2Q5T011 3432 aa25.09■■□□□ 1.61
CHKA-202ENST00000356135 ZNF840PA6NDX5 716 aa25.09■■□□□ 1.61
CHKA-202ENST00000356135 MDM4O15151 490 aa25.09■■□□□ 1.61
CHKA-202ENST00000356135 F11P03951 625 aa25.09■■□□□ 1.61
CHKA-202ENST00000356135 MAN1A1P33908 653 aa25.09■■□□□ 1.61
CHKA-202ENST00000356135 MARCKSL1P49006 195 aa25.09■■□□□ 1.61
CHKA-202ENST00000356135 HDAC4P56524 1084 aa25.09■■□□□ 1.61
CHKA-202ENST00000356135 NME3Q13232 169 aa25.09■■□□□ 1.61
CHKA-202ENST00000356135 TXNRD3NBQ6F5E7 133 aa25.09■■□□□ 1.61
CHKA-202ENST00000356135 ELMOD1Q8N336 334 aa25.09■■□□□ 1.61
CHKA-202ENST00000356135 DQX1Q8TE96 717 aaKnown RBP25.09■■□□□ 1.61
CHKA-202ENST00000356135 HDAC7Q8WUI4 952 aa25.09■■□□□ 1.61
CHKA-202ENST00000356135 CENPIQ92674 756 aaPredicted RBP25.09■■□□□ 1.61
CHKA-202ENST00000356135 KRT35Q92764 455 aa25.09■■□□□ 1.61
CHKA-202ENST00000356135 CASP10Q92851 521 aa25.09■■□□□ 1.61
CHKA-202ENST00000356135 PSMB7Q99436 277 aa25.09■■□□□ 1.61
CHKA-202ENST00000356135 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.09■■□□□ 1.61
CHKA-202ENST00000356135 DNMT3BQ9UBC3 853 aaKnown RBP25.09■■□□□ 1.61
CHKA-202ENST00000356135 TRIOBPQ9H2D6 2365 aa25.09■■□□□ 1.61
CHKA-202ENST00000356135 RNF8O76064 485 aa25.08■■□□□ 1.61
CHKA-202ENST00000356135 SLC1A1P43005 524 aa25.08■■□□□ 1.61
CHKA-202ENST00000356135 CD101Q93033 1021 aa25.08■■□□□ 1.61
CHKA-202ENST00000356135 OSBPL9Q96SU4 736 aa25.08■■□□□ 1.61
CHKA-202ENST00000356135 CDCA3Q99618 268 aaPredicted RBP25.08■■□□□ 1.61
CHKA-202ENST00000356135 TRPM5Q9NZQ8 1165 aa25.08■■□□□ 1.61
CHKA-202ENST00000356135 STAP1Q9ULZ2 295 aa25.08■■□□□ 1.61
CHKA-202ENST00000356135 GLP2RO95838 553 aa25.08■■□□□ 1.6
CHKA-202ENST00000356135 MYL4P12829 197 aa25.08■■□□□ 1.6
CHKA-202ENST00000356135 GJA1P17302 382 aa25.08■■□□□ 1.6
CHKA-202ENST00000356135 GABRR2P28476 465 aa25.08■■□□□ 1.6
CHKA-202ENST00000356135 MIPP30301 263 aa25.08■■□□□ 1.6
CHKA-202ENST00000356135 GJC1P36383 396 aa25.08■■□□□ 1.6
CHKA-202ENST00000356135 ATP13A4Q4VNC1 1196 aa25.08■■□□□ 1.6
CHKA-202ENST00000356135 SCYL2Q6P3W7 929 aa25.08■■□□□ 1.6
CHKA-202ENST00000356135 GAREM2Q75VX8 874 aa25.08■■□□□ 1.6
CHKA-202ENST00000356135 RTL10Q7L3V2 364 aa25.08■■□□□ 1.6
CHKA-202ENST00000356135 RSRC2Q7L4I2 434 aaKnown RBP25.08■■□□□ 1.6
CHKA-202ENST00000356135 BEND5Q7L4P6 421 aa25.08■■□□□ 1.6
CHKA-202ENST00000356135 TAC4Q86UU9 113 aa25.08■■□□□ 1.6
CHKA-202ENST00000356135 RNF139Q8WU17 664 aa25.08■■□□□ 1.6
CHKA-202ENST00000356135 PPP2R3CQ969Q6 453 aa25.08■■□□□ 1.6
CHKA-202ENST00000356135 CLIC5Q9NZA1 410 aa25.08■■□□□ 1.6
CHKA-202ENST00000356135 SRGAP2O75044 1071 aa25.07■■□□□ 1.6
CHKA-202ENST00000356135 TRUB2O95900 331 aaKnown RBP25.07■■□□□ 1.6
CHKA-202ENST00000356135 IL1R2P27930 398 aa25.07■■□□□ 1.6
CHKA-202ENST00000356135 HOXA9P31269 272 aa25.07■■□□□ 1.6
CHKA-202ENST00000356135 PSEN1P49768 467 aa25.07■■□□□ 1.6
CHKA-202ENST00000356135 NTHL1P78549 312 aa25.07■■□□□ 1.6
CHKA-202ENST00000356135 TMC5Q6UXY8 1006 aa25.07■■□□□ 1.6
CHKA-202ENST00000356135 BNIPLQ7Z465 357 aa25.07■■□□□ 1.6
CHKA-202ENST00000356135 PDZD8Q8NEN9 1154 aa25.07■■□□□ 1.6
CHKA-202ENST00000356135 ZNF707Q96C28 371 aaPredicted RBP25.07■■□□□ 1.6
CHKA-202ENST00000356135 HES6Q96HZ4 224 aa25.07■■□□□ 1.6
CHKA-202ENST00000356135 PEBP4Q96S96 227 aa25.07■■□□□ 1.6
CHKA-202ENST00000356135 APOL5Q9BWW9 433 aa25.07■■□□□ 1.6
CHKA-202ENST00000356135 PRKD2Q9BZL6 878 aa25.07■■□□□ 1.6
CHKA-202ENST00000356135 PIGVQ9NUD9 493 aa25.07■■□□□ 1.6
CHKA-202ENST00000356135 UXTQ9UBK9 157 aaPredicted RBP25.07■■□□□ 1.6
CHKA-202ENST00000356135 DPP7Q9UHL4 492 aa25.07■■□□□ 1.6
CHKA-202ENST00000356135 LCMT1Q9UIC8 334 aa25.07■■□□□ 1.6
CHKA-202ENST00000356135 MTCH2Q9Y6C9 303 aa25.07■■□□□ 1.6
CHKA-202ENST00000356135 TMEM265A0A087WTH1 108 aa25.06■■□□□ 1.6
CHKA-202ENST00000356135 C2orf78A6NCI8 922 aa25.06■■□□□ 1.6
CHKA-202ENST00000356135 DDX3YO15523 660 aaKnown RBP25.06■■□□□ 1.6
CHKA-202ENST00000356135 MSI1O43347 362 aaKnown RBP25.06■■□□□ 1.6
CHKA-202ENST00000356135 HNRNPA1P09651 372 aaKnown RBP eCLIP25.06■■□□□ 1.6
CHKA-202ENST00000356135 RALAP11233 206 aa25.06■■□□□ 1.6
CHKA-202ENST00000356135 CCR2P41597 374 aa25.06■■□□□ 1.6
CHKA-202ENST00000356135 DEUP1Q05D60 604 aa25.06■■□□□ 1.6
CHKA-202ENST00000356135 CKAP4Q07065 602 aaKnown RBP25.06■■□□□ 1.6
CHKA-202ENST00000356135 ACAP1Q15027 740 aa25.06■■□□□ 1.6
CHKA-202ENST00000356135 RPS6KA1Q15418 735 aa25.06■■□□□ 1.6
CHKA-202ENST00000356135 SNX30Q5VWJ9 437 aa25.06■■□□□ 1.6
CHKA-202ENST00000356135 OVCA2Q8WZ82 227 aa25.06■■□□□ 1.6
CHKA-202ENST00000356135 TSC1Q92574 1164 aa25.06■■□□□ 1.6
CHKA-202ENST00000356135 ACSF2Q96CM8 615 aaPredicted RBP25.06■■□□□ 1.6
CHKA-202ENST00000356135 TRIM62Q9BVG3 475 aa25.06■■□□□ 1.6
CHKA-202ENST00000356135 FAM204AQ9H8W3 233 aa25.06■■□□□ 1.6
CHKA-202ENST00000356135 DDIT4Q9NX09 232 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms