RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 ARRDC4Q8NCT1 418 aa17.73■□□□□ 0.43
COL27A1-201ENST00000356083 VIPAS39Q9H9C1 493 aa17.73■□□□□ 0.43
COL27A1-201ENST00000356083 RCOR1Q9UKL0 485 aa17.73■□□□□ 0.43
COL27A1-201ENST00000356083 VAV3Q9UKW4 847 aa17.73■□□□□ 0.43
COL27A1-201ENST00000356083 CHKBQ9Y259 395 aa17.73■□□□□ 0.43
COL27A1-201ENST00000356083 PHF20L1A8MW92 1017 aa17.73■□□□□ 0.43
COL27A1-201ENST00000356083 PGBD2Q6P3X8 592 aa17.73■□□□□ 0.43
COL27A1-201ENST00000356083 SNX13Q9Y5W8 968 aa17.73■□□□□ 0.43
COL27A1-201ENST00000356083 CETPP11597 493 aa17.73■□□□□ 0.43
COL27A1-201ENST00000356083 CTCFP49711 727 aaPredicted RBP17.73■□□□□ 0.43
COL27A1-201ENST00000356083 TNKS2Q9H2K2 1166 aa17.73■□□□□ 0.43
COL27A1-201ENST00000356083 TMEM138Q9NPI0 162 aa17.73■□□□□ 0.43
COL27A1-201ENST00000356083 ZNHIT2Q9UHR6 403 aa17.73■□□□□ 0.43
COL27A1-201ENST00000356083 DMTNQ08495 405 aa17.73■□□□□ 0.43
COL27A1-201ENST00000356083 PREPLQ4J6C6 727 aaPredicted RBP17.73■□□□□ 0.43
COL27A1-201ENST00000356083 GPR141Q7Z602 305 aa17.73■□□□□ 0.43
COL27A1-201ENST00000356083 CNPPD1Q9BV87 410 aa17.73■□□□□ 0.43
COL27A1-201ENST00000356083 PIK3C2GO75747 1445 aa17.73■□□□□ 0.43
COL27A1-201ENST00000356083 MYBPC1Q00872 1141 aa17.73■□□□□ 0.43
COL27A1-201ENST00000356083 ZSWIM2Q8NEG5 633 aa17.73■□□□□ 0.43
COL27A1-201ENST00000356083 ZNF232Q9UNY5 417 aa17.73■□□□□ 0.43
COL27A1-201ENST00000356083 HEG1Q9ULI3 1381 aa17.72■□□□□ 0.43
COL27A1-201ENST00000356083 CSF1RP07333 972 aa17.72■□□□□ 0.43
COL27A1-201ENST00000356083 OXCT1P55809 520 aa17.72■□□□□ 0.43
COL27A1-201ENST00000356083 CASP12Q6UXS9 341 aa17.72■□□□□ 0.43
COL27A1-201ENST00000356083 CERKQ8TCT0 537 aa17.72■□□□□ 0.43
COL27A1-201ENST00000356083 ZCCHC17Q9NP64 241 aaKnown RBP17.72■□□□□ 0.43
COL27A1-201ENST00000356083 WDR35Q9P2L0 1181 aa17.72■□□□□ 0.43
COL27A1-201ENST00000356083 TBKBP1A7MCY6 615 aa17.72■□□□□ 0.43
COL27A1-201ENST00000356083 ATG7O95352 703 aa17.72■□□□□ 0.43
COL27A1-201ENST00000356083 CD2BP2O95400 341 aaKnown RBP17.72■□□□□ 0.43
COL27A1-201ENST00000356083 PSMB9P28065 219 aa17.72■□□□□ 0.43
COL27A1-201ENST00000356083 LIFRP42702 1097 aa17.72■□□□□ 0.43
COL27A1-201ENST00000356083 TAF6P49848 677 aa17.72■□□□□ 0.43
COL27A1-201ENST00000356083 KHDRBS3O75525 346 aaKnown RBP17.72■□□□□ 0.43
COL27A1-201ENST00000356083 HLA-DRAP01903 254 aa17.72■□□□□ 0.43
COL27A1-201ENST00000356083 OVGP1Q12889 678 aa17.72■□□□□ 0.43
COL27A1-201ENST00000356083 SMYD1Q8NB12 490 aa17.72■□□□□ 0.43
COL27A1-201ENST00000356083 PPP1R10Q96QC0 940 aaKnown RBP17.72■□□□□ 0.43
COL27A1-201ENST00000356083 SENP6Q9GZR1 1112 aaPredicted RBP17.72■□□□□ 0.43
COL27A1-201ENST00000356083 TMEM39BQ9GZU3 492 aa17.72■□□□□ 0.43
COL27A1-201ENST00000356083 FANCEQ9HB96 536 aa17.72■□□□□ 0.43
COL27A1-201ENST00000356083 DUSP12Q9UNI6 340 aa17.72■□□□□ 0.43
COL27A1-201ENST00000356083 DGAT1O75907 488 aa17.72■□□□□ 0.43
COL27A1-201ENST00000356083 MTAPQ13126 283 aa17.72■□□□□ 0.43
COL27A1-201ENST00000356083 C16orf59Q7L2K0 433 aa17.72■□□□□ 0.43
COL27A1-201ENST00000356083 OSBPL8Q9BZF1 889 aa17.72■□□□□ 0.43
COL27A1-201ENST00000356083 TUBGCP4Q9UGJ1 667 aa17.72■□□□□ 0.43
COL27A1-201ENST00000356083 S100GP29377 79 aa17.72■□□□□ 0.43
COL27A1-201ENST00000356083 RAP1GAPP47736 663 aa17.72■□□□□ 0.43
COL27A1-201ENST00000356083 POU6F1Q14863 301 aa17.72■□□□□ 0.43
COL27A1-201ENST00000356083 DAB2IPQ5VWQ8 1189 aa17.72■□□□□ 0.43
COL27A1-201ENST00000356083 TPGS1Q6ZTW0 290 aa17.72■□□□□ 0.43
COL27A1-201ENST00000356083 TBC1D10CQ8IV04 446 aa17.72■□□□□ 0.43
COL27A1-201ENST00000356083 PTGES3LE9PB15 166 aa17.72■□□□□ 0.43
COL27A1-201ENST00000356083 UBE2Q2LH0YL09 131 aa17.72■□□□□ 0.43
COL27A1-201ENST00000356083 CSDE1O75534 798 aaKnown RBP17.72■□□□□ 0.43
COL27A1-201ENST00000356083 ECDO95905 644 aaPredicted RBP17.72■□□□□ 0.43
COL27A1-201ENST00000356083 ZNF286BP0CG31 522 aa17.72■□□□□ 0.43
COL27A1-201ENST00000356083 C2CD6Q53TS8 623 aa17.72■□□□□ 0.43
COL27A1-201ENST00000356083 LRRC1Q9BTT6 524 aa17.72■□□□□ 0.43
COL27A1-201ENST00000356083 PDGFCQ9NRA1 345 aa17.72■□□□□ 0.43
COL27A1-201ENST00000356083 GPSM3Q9Y4H4 160 aa17.72■□□□□ 0.43
COL27A1-201ENST00000356083 TRPC5OSA6NMA1 111 aa17.71■□□□□ 0.43
COL27A1-201ENST00000356083 PHF2O75151 1096 aa17.71■□□□□ 0.43
COL27A1-201ENST00000356083 SAMD7Q7Z3H4 446 aa17.71■□□□□ 0.43
COL27A1-201ENST00000356083 SERPINB12Q96P63 405 aa17.71■□□□□ 0.43
COL27A1-201ENST00000356083 TARS2Q9BW92 718 aaKnown RBP17.71■□□□□ 0.43
COL27A1-201ENST00000356083 AREL1O15033 823 aa17.71■□□□□ 0.43
COL27A1-201ENST00000356083 THP07101 528 aa17.71■□□□□ 0.43
COL27A1-201ENST00000356083 USP11P51784 963 aa17.71■□□□□ 0.43
COL27A1-201ENST00000356083 FAM20BO75063 409 aa17.71■□□□□ 0.43
COL27A1-201ENST00000356083 GARTP22102 1010 aa17.71■□□□□ 0.43
COL27A1-201ENST00000356083 TCF7P36402 384 aaPredicted RBP17.71■□□□□ 0.43
COL27A1-201ENST00000356083 INSCQ1MX18 579 aa17.71■□□□□ 0.43
COL27A1-201ENST00000356083 E2F7Q96AV8 911 aa17.71■□□□□ 0.43
COL27A1-201ENST00000356083 CGRRF1Q99675 332 aa17.71■□□□□ 0.43
COL27A1-201ENST00000356083 KCTD14Q9BQ13 255 aaPredicted RBP17.71■□□□□ 0.43
COL27A1-201ENST00000356083 REEP2Q9BRK0 252 aa17.71■□□□□ 0.43
COL27A1-201ENST00000356083 ZNF112Q9UJU3 913 aa17.71■□□□□ 0.43
COL27A1-201ENST00000356083 H3BMM5 538 aa17.71■□□□□ 0.43
COL27A1-201ENST00000356083 SLC2A3P11169 496 aa17.71■□□□□ 0.43
COL27A1-201ENST00000356083 DNAJC14Q6Y2X3 702 aaPredicted RBP17.71■□□□□ 0.43
COL27A1-201ENST00000356083 UTS2BQ765I0 119 aa17.71■□□□□ 0.43
COL27A1-201ENST00000356083 CEP68Q76N32 757 aa17.71■□□□□ 0.43
COL27A1-201ENST00000356083 TRIM63Q969Q1 353 aa17.71■□□□□ 0.43
COL27A1-201ENST00000356083 VPS33AQ96AX1 596 aa17.71■□□□□ 0.43
COL27A1-201ENST00000356083 C1QTNF7Q9BXJ2 289 aa17.71■□□□□ 0.43
COL27A1-201ENST00000356083 CELF4Q9BZC1 486 aaKnown RBP17.71■□□□□ 0.43
COL27A1-201ENST00000356083 DCP1AQ9NPI6 582 aaPredicted RBP17.71■□□□□ 0.43
COL27A1-201ENST00000356083 RESTQ13127 1097 aa17.71■□□□□ 0.43
COL27A1-201ENST00000356083 FBXO42Q6P3S6 717 aa17.71■□□□□ 0.43
COL27A1-201ENST00000356083 LY9Q9HBG7 655 aa17.71■□□□□ 0.43
COL27A1-201ENST00000356083 SMG5Q9UPR3 1016 aaKnown RBP17.71■□□□□ 0.43
COL27A1-201ENST00000356083 WDR19Q8NEZ3 1342 aa17.71■□□□□ 0.43
COL27A1-201ENST00000356083 CNTNAP2Q9UHC6 1331 aa17.71■□□□□ 0.43
COL27A1-201ENST00000356083 TRIM64A6NGJ6 449 aa17.71■□□□□ 0.42
COL27A1-201ENST00000356083 SCAMP3O14828 347 aaKnown RBP17.71■□□□□ 0.42
COL27A1-201ENST00000356083 TPD52L2O43399 206 aaKnown RBP17.71■□□□□ 0.42
COL27A1-201ENST00000356083 RBP3P10745 1247 aa17.71■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms