RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 NAB1Q13506 487 aa11.83□□□□□ -0.52
CAPN9-202ENST00000354537 CES4AQ5XG92 561 aa11.83□□□□□ -0.52
CAPN9-202ENST00000354537 NDUFAF2Q8N183 169 aa11.83□□□□□ -0.52
CAPN9-202ENST00000354537 RNF217Q8TC41 542 aa11.83□□□□□ -0.52
CAPN9-202ENST00000354537 HSPH1Q92598 858 aa11.83□□□□□ -0.52
CAPN9-202ENST00000354537 EBNA1BP2Q99848 306 aaKnown RBP11.83□□□□□ -0.52
CAPN9-202ENST00000354537 MECRQ9BV79 373 aa11.83□□□□□ -0.52
CAPN9-202ENST00000354537 BCO2Q9BYV7 579 aa11.83□□□□□ -0.52
CAPN9-202ENST00000354537 MTMR12Q9C0I1 747 aa11.83□□□□□ -0.52
CAPN9-202ENST00000354537 NRDE2Q9H7Z3 1164 aa11.83□□□□□ -0.52
CAPN9-202ENST00000354537 ETNK2Q9NVF9 386 aa11.83□□□□□ -0.52
CAPN9-202ENST00000354537 PCSK1NQ9UHG2 260 aa11.83□□□□□ -0.52
CAPN9-202ENST00000354537 CYTH4Q9UIA0 394 aa11.83□□□□□ -0.52
CAPN9-202ENST00000354537 ATP9BO43861 1147 aa11.82□□□□□ -0.52
CAPN9-202ENST00000354537 B4GALT4O60513 344 aa11.82□□□□□ -0.52
CAPN9-202ENST00000354537 RNASEH1O60930 286 aaKnown RBP11.82□□□□□ -0.52
CAPN9-202ENST00000354537 TNNC2P02585 160 aa11.82□□□□□ -0.52
CAPN9-202ENST00000354537 COPAP53621 1224 aa11.82□□□□□ -0.52
CAPN9-202ENST00000354537 TARBP2Q15633 366 aaKnown RBP11.82□□□□□ -0.52
CAPN9-202ENST00000354537 INSCQ1MX18 579 aa11.82□□□□□ -0.52
CAPN9-202ENST00000354537 ZNF394Q53GI3 561 aa11.82□□□□□ -0.52
CAPN9-202ENST00000354537 BOLA3Q53S33 107 aa11.82□□□□□ -0.52
CAPN9-202ENST00000354537 UNC5AQ6ZN44 842 aa11.82□□□□□ -0.52
CAPN9-202ENST00000354537 AKT1S1Q96B36 256 aa11.82□□□□□ -0.52
CAPN9-202ENST00000354537 CMTM5Q96DZ9 223 aa11.82□□□□□ -0.52
CAPN9-202ENST00000354537 CLPTM1LQ96KA5 538 aa11.82□□□□□ -0.52
CAPN9-202ENST00000354537 CPXM1Q96SM3 734 aa11.82□□□□□ -0.52
CAPN9-202ENST00000354537 SMYD2Q9NRG4 433 aa11.82□□□□□ -0.52
CAPN9-202ENST00000354537 NRBP2Q9NSY0 501 aa11.82□□□□□ -0.52
CAPN9-202ENST00000354537 PCDHA11Q9Y5I1 949 aa11.82□□□□□ -0.52
CAPN9-202ENST00000354537 ERBB2P04626 1255 aa11.82□□□□□ -0.52
CAPN9-202ENST00000354537 EDN1P05305 212 aa11.82□□□□□ -0.52
CAPN9-202ENST00000354537 C6orf222P0C671 652 aaPredicted RBP11.82□□□□□ -0.52
CAPN9-202ENST00000354537 GPD1P21695 349 aa11.82□□□□□ -0.52
CAPN9-202ENST00000354537 CDH6P55285 790 aa11.82□□□□□ -0.52
CAPN9-202ENST00000354537 MBLAC2Q68D91 279 aa11.82□□□□□ -0.52
CAPN9-202ENST00000354537 SLC9A4Q6AI14 798 aa11.82□□□□□ -0.52
CAPN9-202ENST00000354537 TMEM126BQ8IUX1 230 aa11.82□□□□□ -0.52
CAPN9-202ENST00000354537 TAB3Q8N5C8 712 aaPredicted RBP11.82□□□□□ -0.52
CAPN9-202ENST00000354537 PLD5Q8N7P1 536 aa11.82□□□□□ -0.52
CAPN9-202ENST00000354537 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.82□□□□□ -0.52
CAPN9-202ENST00000354537 ZBED3Q96IU2 234 aaPredicted RBP11.82□□□□□ -0.52
CAPN9-202ENST00000354537 SIGLEC10Q96LC7 697 aa11.82□□□□□ -0.52
CAPN9-202ENST00000354537 TBCBQ99426 244 aa11.82□□□□□ -0.52
CAPN9-202ENST00000354537 SLC13A1Q9BZW2 595 aa11.82□□□□□ -0.52
CAPN9-202ENST00000354537 EBF3Q9H4W6 596 aa11.82□□□□□ -0.52
CAPN9-202ENST00000354537 DCDC2Q9UHG0 476 aa11.82□□□□□ -0.52
CAPN9-202ENST00000354537 TTLL13PA6NNM8 815 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 MSCO60682 206 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 GLRA3O75311 464 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 AVILO75366 819 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 GCATO75600 419 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 HMGCRP04035 888 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 CD19P15391 556 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 VCLP18206 1134 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 PDE1BQ01064 536 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 CAPSQ13938 189 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 FASTKD1Q53R41 847 aaKnown RBP11.81□□□□□ -0.52
CAPN9-202ENST00000354537 TEDDM1Q5T9Z0 273 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 STEAP4Q687X5 459 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 RFX8Q6ZV50 586 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 CYP4V2Q6ZWL3 525 aaPredicted RBP11.81□□□□□ -0.52
CAPN9-202ENST00000354537 RAPH1Q70E73 1250 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 CDKL3Q8IVW4 592 aaPredicted RBP11.81□□□□□ -0.52
CAPN9-202ENST00000354537 ALDH16A1Q8IZ83 802 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 RTKN2Q8IZC4 609 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 ADGRF2Q8IZF7 708 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 GSTCDQ8NEC7 633 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 EZH1Q92800 747 aaPredicted RBP11.81□□□□□ -0.52
CAPN9-202ENST00000354537 OPTNQ96CV9 577 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 ANKRD36BP1Q96IX9 119 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 NDNQ99608 321 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 ACO2Q99798 780 aaKnown RBP11.81□□□□□ -0.52
CAPN9-202ENST00000354537 DDX50Q9BQ39 737 aaKnown RBP11.81□□□□□ -0.52
CAPN9-202ENST00000354537 MOCS1Q9NZB8 636 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 TMCO1Q9UM00 188 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 MAD1L1Q9Y6D9 718 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 HMX2A2RU54 273 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 ARHGAP42A6NI28 874 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 DPYSL4O14531 572 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 APOL1O14791 398 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 KCNN4O15554 427 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 ALDH1A2O94788 518 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 ZBED1O96006 694 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 GSRP00390 522 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 SERPINE1P05121 402 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 HOXC6P09630 235 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 CSH1P0DML2 217 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 CSH2P0DML3 217 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 CCDC130P13994 396 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 TNFSF9P41273 254 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 CCNIQ14094 377 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 UBAP2LQ14157 1087 aaKnown RBP11.81□□□□□ -0.52
CAPN9-202ENST00000354537 MAP7Q14244 749 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 SCARA3Q6AZY7 606 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 NPNTQ6UXI9 565 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 EMC1Q8N766 993 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 REPS2Q8NFH8 660 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 PPP1R14CQ8TAE6 165 aa11.81□□□□□ -0.52
CAPN9-202ENST00000354537 NAT14Q8WUY8 206 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms