RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 CEP295NLQ96MC4 621 aa11.87□□□□□ -0.51
RTN3-204ENST00000354497 FIZ1Q96SL8 496 aa11.87□□□□□ -0.51
RTN3-204ENST00000354497 MMS19Q96T76 1030 aa11.87□□□□□ -0.51
RTN3-204ENST00000354497 SNX25Q9H3E2 840 aa11.87□□□□□ -0.51
RTN3-204ENST00000354497 LIMCH1Q9UPQ0 1083 aa11.87□□□□□ -0.51
RTN3-204ENST00000354497 BTBD3Q9Y2F9 522 aa11.87□□□□□ -0.51
RTN3-204ENST00000354497 ASH1LQ9NR48 2969 aaKnown RBP11.87□□□□□ -0.51
RTN3-204ENST00000354497 GOLGA6L22H0YM25 854 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 YWHAQP27348 245 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 ADSSP30520 456 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 CACNA2D1P54289 1103 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 NOP14P78316 857 aaKnown RBP11.86□□□□□ -0.51
RTN3-204ENST00000354497 STARD3Q14849 445 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 SUZ12Q15022 739 aaKnown RBP11.86□□□□□ -0.51
RTN3-204ENST00000354497 ICE2Q659A1 982 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 IL27RAQ6UWB1 636 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 TPGS1Q6ZTW0 290 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 SFR1Q86XK3 245 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 CACUL1Q86Y37 369 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 KRI1Q8N9T8 703 aaKnown RBP11.86□□□□□ -0.51
RTN3-204ENST00000354497 BAHD1Q8TBE0 780 aaPredicted RBP11.86□□□□□ -0.51
RTN3-204ENST00000354497 MYCBPAPQ8TBZ2 947 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 RAD54LQ92698 747 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 HPDLQ96IR7 371 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 C8orf48Q96LL4 319 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 XPO6Q96QU8 1125 aaKnown RBP11.86□□□□□ -0.51
RTN3-204ENST00000354497 GABRG3Q99928 467 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 BBS2Q9BXC9 721 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 PCIF1Q9H4Z3 704 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 PDE11AQ9HCR9 933 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 DONSONQ9NYP3 566 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 TBC1D7Q9P0N9 293 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 SIX4Q9UIU6 781 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 EXOC7Q9UPT5 735 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 STARD13Q9Y3M8 1113 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 RAI2Q9Y5P3 530 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 FLNBO75369 2602 aaKnown RBP11.86□□□□□ -0.51
RTN3-204ENST00000354497 A0A1B0GVT2 93 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 TTC36A6NLP5 189 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 WASH3PC4AMC7 463 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 TK2O00142 265 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 PLK4O00444 970 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 BCAT2O15382 392 aaPredicted RBP11.86□□□□□ -0.51
RTN3-204ENST00000354497 LDHAP00338 332 aaKnown RBP11.86□□□□□ -0.51
RTN3-204ENST00000354497 TNNC2P02585 160 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 ZNF883P0CG24 379 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 HLA-EP13747 358 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 WARSP23381 471 aaKnown RBP11.86□□□□□ -0.51
RTN3-204ENST00000354497 CAMK2BQ13554 666 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 RILPL1Q5EBL4 403 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 HECTD3Q5T447 861 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 DHRS13Q6UX07 377 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 DYMQ7RTS9 669 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 SYCP3Q8IZU3 236 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 PDZD8Q8NEN9 1154 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 ENGASEQ8NFI3 743 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 OR6B3Q8NGW1 331 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 BHMTQ93088 406 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 WBP2Q969T9 261 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 ZFRQ96KR1 1074 aaKnown RBP11.86□□□□□ -0.51
RTN3-204ENST00000354497 FCRL3Q96P31 734 aaPredicted RBP11.86□□□□□ -0.51
RTN3-204ENST00000354497 ACCSQ96QU6 501 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 ZNF518BQ9C0D4 1074 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 CCSER2Q9H7U1 834 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 MRPL44Q9H9J2 332 aaKnown RBP11.86□□□□□ -0.51
RTN3-204ENST00000354497 BLOC1S4Q9NUP1 217 aa11.86□□□□□ -0.51
RTN3-204ENST00000354497 CHORDC1Q9UHD1 332 aaPredicted RBP11.86□□□□□ -0.51
RTN3-204ENST00000354497 EIF2B4Q9UI10 523 aaKnown RBP11.86□□□□□ -0.51
RTN3-204ENST00000354497 PTPRBP23467 1997 aa11.85□□□□□ -0.51
RTN3-204ENST00000354497 CELSR3Q9NYQ7 3312 aa11.85□□□□□ -0.51
RTN3-204ENST00000354497 GON4LQ3T8J9 2241 aa11.85□□□□□ -0.51
RTN3-204ENST00000354497 CYSRT1A8MQ03 144 aa11.85□□□□□ -0.51
RTN3-204ENST00000354497 PRRT4C9JH25 899 aa11.85□□□□□ -0.51
RTN3-204ENST00000354497 CLDN5O00501 218 aa11.85□□□□□ -0.51
RTN3-204ENST00000354497 CAPN9O14815 690 aa11.85□□□□□ -0.51
RTN3-204ENST00000354497 TYRP14679 529 aa11.85□□□□□ -0.51
RTN3-204ENST00000354497 CALRP27797 417 aaKnown RBP11.85□□□□□ -0.51
RTN3-204ENST00000354497 DGKGP49619 791 aa11.85□□□□□ -0.51
RTN3-204ENST00000354497 BNC1Q01954 994 aa11.85□□□□□ -0.51
RTN3-204ENST00000354497 SEMG2Q02383 582 aa11.85□□□□□ -0.51
RTN3-204ENST00000354497 KCNA1Q09470 495 aa11.85□□□□□ -0.51
RTN3-204ENST00000354497 LARP1BQ659C4 914 aaKnown RBP11.85□□□□□ -0.51
RTN3-204ENST00000354497 DPH6Q7L8W6 267 aa11.85□□□□□ -0.51
RTN3-204ENST00000354497 ZNF720Q7Z2F6 126 aa11.85□□□□□ -0.51
RTN3-204ENST00000354497 FAM124AQ86V42 546 aa11.85□□□□□ -0.51
RTN3-204ENST00000354497 NUP93Q8N1F7 819 aa11.85□□□□□ -0.51
RTN3-204ENST00000354497 CXorf38Q8TB03 319 aa11.85□□□□□ -0.51
RTN3-204ENST00000354497 DNASE2BQ8WZ79 361 aa11.85□□□□□ -0.51
RTN3-204ENST00000354497 LARP4BQ92615 738 aaKnown RBP11.85□□□□□ -0.51
RTN3-204ENST00000354497 HVCN1Q96D96 273 aa11.85□□□□□ -0.51
RTN3-204ENST00000354497 MRPL45Q9BRJ2 306 aaKnown RBP11.85□□□□□ -0.51
RTN3-204ENST00000354497 MED10Q9BTT4 135 aa11.85□□□□□ -0.51
RTN3-204ENST00000354497 TRIM9Q9C026 710 aa11.85□□□□□ -0.51
RTN3-204ENST00000354497 ST6GALNAC4Q9H4F1 302 aa11.85□□□□□ -0.51
RTN3-204ENST00000354497 CD248Q9HCU0 757 aa11.85□□□□□ -0.51
RTN3-204ENST00000354497 MED4Q9NPJ6 270 aa11.85□□□□□ -0.51
RTN3-204ENST00000354497 WSB2Q9NYS7 404 aaPredicted RBP11.85□□□□□ -0.51
RTN3-204ENST00000354497 PCDHGB2Q9Y5G2 931 aa11.85□□□□□ -0.51
RTN3-204ENST00000354497 KCNJ18B7U540 433 aa11.84□□□□□ -0.51
RTN3-204ENST00000354497 TNFSF14O43557 240 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms