RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 SLC5A1P13866 664 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 PRKCAP17252 672 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 ZNF135P52742 658 aaPredicted RBP11.01□□□□□ -0.65
CAPN3-203ENST00000349748 ESRRGP62508 458 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 ADGRE1Q14246 886 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 SLC15A2Q16348 729 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 ARHGAP44Q17R89 818 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 CDONQ4KMG0 1287 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 ZNF618Q5T7W0 954 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 HEATR3Q7Z4Q2 680 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 UBE2Q1Q7Z7E8 422 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 TICAM1Q8IUC6 712 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 DNAJC19Q96DA6 116 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 C17orf80Q9BSJ5 609 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 WWP1Q9H0M0 922 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 C10orf88Q9H8K7 445 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 OLAHQ9NV23 265 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 BAZ2AQ9UIF9 1905 aaKnown RBP11.01□□□□□ -0.65
CAPN3-203ENST00000349748 UTRNP46939 3433 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 LRP5O75197 1615 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 NUP98P52948 1817 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 C7orf72A4D263 438 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 LAD1O00515 517 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 TM9SF1O15321 606 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 COPAP53621 1224 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 MLLT10P55197 1068 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 ECM1Q16610 540 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 ZBED5Q49AG3 693 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 TWF2Q6IBS0 349 aaKnown RBP11.01□□□□□ -0.65
CAPN3-203ENST00000349748 NOP9Q86U38 636 aaKnown RBP11.01□□□□□ -0.65
CAPN3-203ENST00000349748 HEATR4Q86WZ0 1026 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 ZC3H7AQ8IWR0 971 aaKnown RBP11.01□□□□□ -0.65
CAPN3-203ENST00000349748 ZCCHC9Q8N567 271 aaKnown RBP11.01□□□□□ -0.65
CAPN3-203ENST00000349748 GLIS1Q8NBF1 620 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 ZNF280CQ8ND82 737 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 TRUB1Q8WWH5 349 aaKnown RBP11.01□□□□□ -0.65
CAPN3-203ENST00000349748 AKT1S1Q96B36 256 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 RMND5BQ96G75 393 aaPredicted RBP11.01□□□□□ -0.65
CAPN3-203ENST00000349748 PKP2Q99959 881 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 PSD2Q9BQI7 771 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 SYT11Q9BT88 431 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 CXorf21Q9HAI6 301 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 FKBP14Q9NWM8 211 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 TXNDC16Q9P2K2 825 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 RIMS3Q9UJD0 308 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 MROH5Q6ZUA9 1318 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 ARHGEF37A1IGU5 675 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 GOLGA8SH3BPF8 625 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 GOLGA8MH3BSY2 632 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 STAM2O75886 525 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 PARNO95453 639 aaKnown RBP11.01□□□□□ -0.65
CAPN3-203ENST00000349748 SERPINB2P05120 415 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 ZSCAN5DPP0CG00 497 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 GRK2P25098 689 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 CASP4P49662 377 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 CTAG1AP78358 180 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 BST1Q10588 318 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 SF3B3Q15393 1217 aaKnown RBP11.01□□□□□ -0.65
CAPN3-203ENST00000349748 SMU1Q2TAY7 513 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 KRT80Q6KB66 452 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 CENPUQ71F23 418 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 FBXW8Q8N3Y1 598 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 DCLK2Q8N568 766 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 COQ7Q99807 217 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 TRIT1Q9H3H1 467 aaKnown RBP11.01□□□□□ -0.65
CAPN3-203ENST00000349748 PLEKHA5Q9HAU0 1116 aa11.01□□□□□ -0.65
CAPN3-203ENST00000349748 ANKRD36CQ5JPF3 1778 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 FSCN2O14926 492 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 ENTPD3O75355 529 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 AKAP3O75969 853 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 CYP7A1P22680 504 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 IL4RP24394 825 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 ETV4P43268 484 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 TFDP1Q14186 410 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 CYP4A22Q5TCH4 519 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 SCARA3Q6AZY7 606 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 GALNT13Q8IUC8 556 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 RELL1Q8IUW5 271 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 LSMEM1Q8N8F7 131 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 ADAMTS16Q8TE57 1224 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 ZNF486Q96H40 463 aaPredicted RBP11□□□□□ -0.65
CAPN3-203ENST00000349748 MROQ9BYG7 248 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 RIC8BQ9NVN3 520 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 THAP1Q9NVV9 213 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 LRP2BPQ9P2M1 347 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 ANKMY1Q9P2S6 941 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 DNAJC12Q9UKB3 198 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 EXOC7Q9UPT5 735 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 SLC27A5Q9Y2P5 690 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 COL4A1P02462 1669 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 DYNC1LI2O43237 492 aaPredicted RBP11□□□□□ -0.65
CAPN3-203ENST00000349748 MMP10P09238 476 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 CALM1P0DP23 149 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 CALM2P0DP24 149 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 CALM3P0DP25 149 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 ITGAXP20702 1163 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 SSTR1P30872 391 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 IDUAP35475 653 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 GRIA3P42263 894 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 ALCAMQ13740 583 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms